LOC122356894 (LOC107698146,LOC107582494,LOC107721215,LOC107678583,LOC107708388)


Basic Information

Item Value
gene id LOC122356894
gene name LOC107698146,LOC107582494,LOC107721215,LOC107678583,LOC107708388
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 147154 ~ 149377 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255988.1
CACTCATGGAATGTTTTGGTCGTCCACTTTGATTAAATCAGAAGCACGGGAAGCGGAAAGCGCCAGAGAGTTACACAAATCTTTATGCTTGTTTACTGACGCACGGGCGAGGGaggggacttttattttaaaatcacccACCATGTCAAAGATGTGCTAAAGGTCCGTGCTGTCGCTGAGGACAGCGGAGAAACTGTACTCGTCAATACCTCGACGATGAATGTAAAAACAGCTCGTCGCTTAATACTGAGGTCTCTGCGTCCGTGTTATACGCCCGCTCGTCGGGGTCATCGACAAAGCGCGAGCCAACCTCCAAAACATGCCACGCGAGCAGAGAGGACTGGATTCAGTCCAGCATCAACATCAAAATATGACTGGATCGGTCCAGCAGACAGACTGTCAAACCTGAGGCCCATCATCTATCACATCCCCGAGAACGAGACGGCCCTGGAGAGGAGGCTGAGGCGCCTGAGACAGGAGACTGAAGACTGGAACCACGAGTTCTGGGCCGAGCAGAACCTCACATTCAGCCAGGAAAAGGAGGAATATGTGAGATCGCGACTGTCGTCAAATGGGCTGTCAGAGAGAGATGATGATGGAAGGAAAAGGACTTTAAGCAGTGAGGAGATGGCAGTATTTTACAAACACTTTTTAGACAAAAACGTTACAAGGCATGCCACTTATAACAGGGAATGGTACAGAAGGAACTTCACCATTACTCTTCTGATGGCAAAAGTAGCTCTCCACAACACATGGAGCACACTGACCGGACAGACCAGAGGACCCGGCCGGGAGAAAGGCAACACTACATGACACGCAAATAAAGACTGTAAAACAGTTAA

Function

NR:

description
PREDICTED: apoptogenic protein 1, mitochondrial-like

GO: NA

KEGG:

id description
K23506 APOPT1; apoptogenic protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255988.1 True 842 mRNA 0.49 6 147154 149377

Neighbor

gene id symbol gene type direction distance location
trmt61a trmt61a,LOC107582491,LOC107698149,LOC107678528,LOC107589545,LOC107708432 coding upstream 25673 110945 ~ 121481 (+)
mocos mocos,LOC107698156,LOC107582499,LOC107678503,LOC107708374 coding downstream 149656 299033 ~ 305339 (+)
anxa11a anxa11a,LOC107721228,LOC107708439,LOC107698157,LOC107582500,LOC107589536,LOC107678500 coding downstream 157346 306723 ~ 320043 (+)
LOC122356635 LOC107698159,LOC107747466 coding downstream 231586 380963 ~ 540430 (+)
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding downstream 414442 563819 ~ 677599 (+)
LOC122357037 NA coding downstream 659158 808535 ~ 809420 (+)
G89504 LOC107698148 non-coding upstream 37489 108154 ~ 109665 (+)
G89496 NA non-coding upstream 41996 36978 ~ 105158 (+)
G89526 NA non-coding downstream 74672 224049 ~ 224290 (+)
G89527 NA non-coding downstream 75137 224514 ~ 224746 (+)
G89627 NA non-coding downstream 227980 377357 ~ 378829 (+)
G89630 NA non-coding downstream 230735 380112 ~ 380411 (+)
G89635 NA non-coding downstream 349885 499262 ~ 504906 (+)
klc1a klc1a,klc1,LOC107721224,LOC107698151,LOC107708436,LOC107678539 other downstream 1062 150439 ~ 183438 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other downstream 41420 190797 ~ 236893 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other downstream 174354 323731 ~ 376571 (+)
G89631 LOC107698159,LOC107747466 other downstream 231587 380964 ~ 677601 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other downstream 858891 1008268 ~ 1011247 (+)

Expression


Co-expression Network