qrfpra (LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699)


Basic Information

Item Value
gene id qrfpra
gene name LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10986085 ~ 10989734 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256013.1
GTCGCACGAAGTGCTCCGCATCAAGGGAGCTGCCGCTGATTCGGTGTGAAGAGACGCGGCGCTCGACACTTACCAGCCTACTCTTTAAAACTTTGATTTCTCTCGTCCCGTTTTCAAAGACGAGCTTTATACATGGGGGATACGAAGATTACTCCCGAGGCGCTGGAGCAACTACTTCTATTTTACAATCTTACTCGTCAGGAGTTTATTGAGACGTATCAGATTCAGCCGTTGGTTTACATCCCCGAGTTACCGGCCAGCGCCAAAACCGCATTTGTTATTGTGTACACGCTGATTTTTCTCCTGGCTCTCGTTGGAAACAGCCTGGTCGTGTGTATTGTTTTAAGAAAGCGCGGGATCCAGACCGccacaaacatttttatctgCTCCCTGGCCGTCAGCGACCTCCTGATATCTTTCTTCTGCATCCCTTTCACTCTGCTGCAAAACATCTCCTCTGAATGGTTCGGGGGTGTGTTGGTGTGCAAAACAGTTCCCTTTGTTCAGACCACTGCTATTGTGACTGGCATTCTCACAATGACCTGCATCGCTGTGGAGAGGTACCAGGGGATTGTACACCCTCTAAAAATCAAAAGACAGTGCACTCCACAAAGAGCATACAGAATGCTGGtGGTTGTCTGGATTGAGGCCATGATGGTTGGATCTCCAATGCTCTTTGTTCAACAGTTAGAGgtgaaatatgattttctaTATGATCTCCATCATGTGTGCTGTCAGGAGCGCTGGACCTCGAGTGCCCACAGGAAACAGTATGCAACCTTTATTCTAgtgttcctcttcctcctgcCTCTCGCAGCCATGCTGCTACTCTACACCAGAATTGGTATTGAGCTCTGGATTCGCAAACAAGTTGGAGACTCCTCAGTCCTCAATACCATGAACAAAAGGGAGGTCTGCAAAATATccagAAAGAAGCGAAGGGCCATCAAGATGATGGTCACCATTGTTGTGTTGTTTACTGTCTGCTGGGCCCCTTTTCATACGGTTCATATGCTGTTTGAATACAgTTACCTGAACAAAACGTATGATGACATCACAATCAATATGCTTATTGCTGTTGCACAGGCCATAGGATTTTCAAATTCATTCAACAATCCtatcatttatgcatttatgaatgAGAACTTCCAGAAGAACTGCTTGTCCAccttttcattttgcattagGCGGTCCAGTCAACGTGTCGATGTTAAGGACAAAGCGACAAAGGACAAGGTACTTTTTTGTAAGTCTGCCAGACAAGAAGAAGACATCTCAGTCGTACCTAGAATACATATAGTTGATCAAGTTCAATCTGGAAGACCAAACATGCAAACATCTCTGTCATTTCTGGAGGAGAGGATCTGCTAAGAGCAATAGGATACATGCAAGAtgtattctatctatctatttatctaatATGTatcaatatatatgtatacactgttcaaaattcctttttttttttgtcttttatgcttaccaaggtcatatttatttgctaaa

Function

NR:

description
pyroglutamylated RFamide peptide receptor-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004983 neuropeptide Y receptor activity molecular_function

KEGG:

id description
K08378 QRFPR, GPR103; pyroglutamylated RFamide peptide receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256013.1 True 1506 mRNA 0.44 6 10986085 10989734

Neighbor

gene id symbol gene type direction distance location
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding upstream 4301 10969343 ~ 10981784 (+)
spock2 spock2,LOC107668819,LOC107673954 coding upstream 34817 10924934 ~ 10951268 (+)
dnajb12a dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064 coding upstream 66414 10915644 ~ 10919671 (+)
cuedc2 cuedc2,LOC107585308,LOC107716345,LOC107673918,LOC107588639,LOC107707447 coding upstream 100575 10881919 ~ 10885510 (+)
pax2a pax2a,pax2,LOC101463634,LOC107707401,LOC107668824,LOC107588637,LOC107716343,LOC107585307 coding upstream 157725 10796082 ~ 10828360 (+)
rps24 rps24,LOC107673958 coding downstream 828 10990562 ~ 10993312 (+)
zmiz1a zmiz1a,LOC107588626,LOC108443181 coding downstream 44213 11033947 ~ 11146626 (+)
ppifa ppifa,LOC107668776,LOC107588732,LOC107564349,LOC107673899,LOC108442288,LOC108263515 coding downstream 160262 11149996 ~ 11152447 (+)
LOC122356105 LOC107588620,LOC107707271 coding downstream 223765 11213499 ~ 11215087 (+)
cxcl18a.1 LOC107707282 coding downstream 225506 11215240 ~ 11217428 (+)
G92748 NA non-coding upstream 1440 10984238 ~ 10984645 (+)
G92746 NA non-coding upstream 2806 10982940 ~ 10983279 (+)
G92731 NA non-coding upstream 24389 10959420 ~ 10961696 (+)
G92729 LOC107716350,LOC107673932,LOC107707381,LOC107588636,LOC107585302 non-coding upstream 38166 10820942 ~ 10947919 (+)
LOC122357062 NA non-coding upstream 222394 10753233 ~ 10763691 (+)
LOC122356274 NA non-coding downstream 15176 11004910 ~ 11022056 (+)
G92767 NA non-coding downstream 212920 11202654 ~ 11203684 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding downstream 378532 11368266 ~ 11368907 (+)
G92923 NA non-coding downstream 424489 11414223 ~ 11462116 (+)
G92952 NA non-coding downstream 519504 11509238 ~ 11509888 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 17171 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 565659 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 736360 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1551480 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1821971 9161517 ~ 9164114 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 223792 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 265860 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 399651 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 581926 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 613963 11603697 ~ 11604852 (+)

Expression


Co-expression Network