LOC122356917


Basic Information

Item Value
gene id LOC122356917
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14614221 ~ 14615925 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256025.1
TCAAGTTTCGGTTTTGTTACGTCATTATGTGCGACCCCTTGCGCACAAGGTTTGTAGCGCAGCGAGTTTAGTACACATCCGTGTGCGCCGTCAACGCTCCGTACCGTCTTTTAAATCATGAAACGCGGATTGTTCACCATAATTGGGGTCGCAGCTGGGGCAGTTGGTACGGTTGCACTGGCCCCGGTGGCCCTCACCATGGCTGGATTCACATCTGCTGGTATAGCAGGAGGTTCTCTGGCTGCCAGCATGATGTCATCCGCTGCCATCGCCAACGGTGGCGGTGTGGCCGCGGGAAGTTTGGTCGCTGTGCTCCAGTCTGCAGGTGCTGCTGGACTGTCTACATGTGCGACAGCAGTCGTGGCGTCTGTGGGTGGAGCAGCAGGTGCTGTAATAGGTGGAGCTGCAGATTTGTTCTCTCGTTCCAAGGGTCCACCTtcacatgatgatgatgatgatgataatgatgatgatgatggatgtgaagaagaggaagagacagAGATAAATTTGCTGGAGATGAAAGAGCTTGTGCCAAAATAAAAACTTCtgtatttgtgtgcatgtgcaattaaaatatactgtgattgaatataacatttctttttatcaagatattttgtgttttgtaaaatacCAGGGTATCAGCTTTTGGTATAAAAGCAAGagaatgtaattaaaatgatttgtgtcTTTGAATATCATACAGAATTTGgatttgtttgatatttaaaGCTGGCCTTACTGATACTATTACTTTTCTATATTGCATTAAAGCTGCTTTTGAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256025.1 True 792 mRNA 0.44 4 14614221 14615925

Neighbor

gene id symbol gene type direction distance location
LOC122356918 NA coding downstream 869 14610347 ~ 14613352 (-)
ifi27.1 NA coding downstream 5581 14607380 ~ 14608640 (-)
snapc1b snapc1,LOC107726585,LOC107602935 coding downstream 8140 14601464 ~ 14606081 (-)
syt16 syt16,LOC107726601,LOC107602979,LOC107683639,LOC107553223 coding downstream 13958 14576907 ~ 14600263 (-)
sgpp1b sgpp1,LOC107726595,LOC107602978,LOC107683631,LOC107553224 coding downstream 37873 14563389 ~ 14576348 (-)
LOC122356920 NA coding upstream 874 14616799 ~ 14618999 (-)
eys si:ch211-69e5.1,LOC107553185,LOC107736852,LOC107664247,LOC107747288,LOC107683858 coding upstream 14669 14630594 ~ 14787104 (-)
slc35f3b slc35f3,LOC107747268,LOC107665565,LOC107664233,LOC107736862 coding upstream 703732 15319657 ~ 15370350 (-)
zgc:171482 zgc:171482,LOC107747266,LOC107665614,LOC107702738,LOC107564682,LOC107728442,LOC108262817 coding upstream 827140 15443065 ~ 15507712 (-)
sfrp5 sfrp5,LOC107747303,LOC107665568,LOC107728441,LOC107601040,LOC107564685 coding upstream 930661 15546586 ~ 15561557 (-)
G93905 NA non-coding downstream 424317 14187539 ~ 14189904 (-)
G93879 NA non-coding downstream 683927 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 925595 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 947961 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 950310 13661750 ~ 13663911 (-)
G94003 NA non-coding upstream 256507 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 365071 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 663482 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 988762 15604687 ~ 15605713 (-)
G94145 NA non-coding upstream 1024350 15640275 ~ 15640633 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other downstream 449807 14160323 ~ 14164414 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other downstream 531431 14079532 ~ 14082790 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 702384 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 709519 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 895907 13693026 ~ 13718314 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 408907 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 611407 15227332 ~ 15253357 (-)
G94128 NA other upstream 948692 15564617 ~ 15583917 (-)
G94147 NA other upstream 1026106 15642031 ~ 15642503 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other upstream 1070345 15686270 ~ 15720816 (-)

Expression


Co-expression Network