LOC122356920


Basic Information

Item Value
gene id LOC122356920
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14616799 ~ 14618999 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256028.1
ACAAGGGATACGTATACCGTCTACAGCCAGACTCAGAAATTAGAAATAATGCGATTAATAGAAGTGAATGTTTAGTAGGACCAGAGCCGGTAGGAAACAAGACAATATCTTGAAGAAACTGCTGCTTGGCAACAATAACAGACCGAAACACAAGCAGCTACGTATCAGTTTCGTTTTGTACGTCATTAGGGCGTGGAGTCTAGGTTTAAATCCGACAACTTAAAAGGTGCCAAAACAAGTCATATCGGGACACCAGAAAGCATGCCGTCTCCTCTATTCACCGTCATTGGGCTTACAGCTGGGGCTGCTGGTGCCGTACTTCTGGCCCCAGTTGCGCTCGGGGTGGCTGGTTTTACTGGCGCCGGTATCGCAGCAGGTTCTACGGCAGCTGGCATGATGTCTTCAGCAGCCATTGCCAATGGGGGCGGTGTGGCTGCAGGAAGTTTGGTCGCTATCCTCCAGTCTGCAGGTGCTGCTGGTTTGTCTGCAACAGCAACAGCTGGTCTGGCATCAGTGGGTGGTGCTACAGGAGCTCTAGTAGGTGGAGCGGTTGATTTGCTGAAGAGGATAAGCAAATAGGAAATGTACTGGAGTACTGATCACCGCCCGTAATTGTCTCTGTAgtttgattttaaacatttcattagaTTTTGAAAACAAGAATGTAACGctcaaaatatgtttgttagttttttttgccacttttgTAACCAAAAGTATGGGGTCATCCTAAAGTTCAAAAATCACACTAAAATGTGGTTTAATCATAGAGGATcatttgtatgtttaaatgtatgttcTAAAAGCACTTTCGCATTGTGTTTATGTCCCGTTCattgtaattattatcattCAGTGTTTTGCAAAGACTGTGAAAACCATTTCTACGGTAAATGTGGTAATCATGTGACCAATTACATTTAGAGACACTTTGTAATGCAGTTACCTGCACAAGTGATTAATCatggaaaaaataaagcttcaatACAAAGTTTTGAATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256028.1 True 1004 mRNA 0.42 4 14616799 14618999

Neighbor

gene id symbol gene type direction distance location
LOC122356917 NA coding downstream 874 14614221 ~ 14615925 (-)
LOC122356918 NA coding downstream 3447 14610347 ~ 14613352 (-)
ifi27.1 NA coding downstream 8159 14607380 ~ 14608640 (-)
snapc1b snapc1,LOC107726585,LOC107602935 coding downstream 10718 14601464 ~ 14606081 (-)
syt16 syt16,LOC107726601,LOC107602979,LOC107683639,LOC107553223 coding downstream 16536 14576907 ~ 14600263 (-)
eys si:ch211-69e5.1,LOC107553185,LOC107736852,LOC107664247,LOC107747288,LOC107683858 coding upstream 11595 14630594 ~ 14787104 (-)
slc35f3b slc35f3,LOC107747268,LOC107665565,LOC107664233,LOC107736862 coding upstream 700658 15319657 ~ 15370350 (-)
zgc:171482 zgc:171482,LOC107747266,LOC107665614,LOC107702738,LOC107564682,LOC107728442,LOC108262817 coding upstream 824066 15443065 ~ 15507712 (-)
sfrp5 sfrp5,LOC107747303,LOC107665568,LOC107728441,LOC107601040,LOC107564685 coding upstream 927587 15546586 ~ 15561557 (-)
crtac1b crtac1b,crtac1,LOC107665558,LOC107702729,LOC107601025,LOC108443504 coding upstream 990867 15609866 ~ 15632570 (-)
G93905 NA non-coding downstream 426895 14187539 ~ 14189904 (-)
G93879 NA non-coding downstream 686505 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 928173 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 950539 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 952888 13661750 ~ 13663911 (-)
G94003 NA non-coding upstream 253433 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 361997 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 660408 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 985688 15604687 ~ 15605713 (-)
G94145 NA non-coding upstream 1021276 15640275 ~ 15640633 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other downstream 452385 14160323 ~ 14164414 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other downstream 534009 14079532 ~ 14082790 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 704962 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 712097 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 898485 13693026 ~ 13718314 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 405833 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 608333 15227332 ~ 15253357 (-)
G94128 NA other upstream 945618 15564617 ~ 15583917 (-)
G94147 NA other upstream 1023032 15642031 ~ 15642503 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other upstream 1067271 15686270 ~ 15720816 (-)

Expression


Co-expression Network