si:dkey-192p21.6 (si:dkey-192p21.6,LOC107601802,LOC107726935,LOC107666356,LOC107655416,LOC107559314,LOC100702339)


Basic Information

Item Value
gene id si:dkey-192p21.6
gene name si:dkey-192p21.6,LOC107601802,LOC107726935,LOC107666356,LOC107655416,LOC107559314,LOC100702339
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9523227 ~ 9548967 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256043.1
TACAGTACAGTGATCTTTGAGCGCTCTTATTTTATATgctcaaaaagaagaaaaagaaatacgGCAGATTTGGGATTAACAATGAAGACGATCAATATCATGcaagttttctcttttttcactcTTCTTTCAGCAGGGCTGTCTGAGAGAAACCCTAAAGtttatgaGCTGAAAATGGATGAGGCATTTCTAATATTCCACAACGAACTCCCGTACGTTGTTCATGTTTACTACACCTCAGATTACTGTTATAAGTGTCTTTATCAGCCCCTTGTCACAGTTGGGAATGGTCAGAGCAATATTTCTGTGGTGGTGAGCACACAATTCACACTGACTCTAAAAATCACACCTGTGGATGAAAACGTCACTCTGTGCAGTCTGAGTCAGACGTTTGAGGAAGCTGGCCATTATTCTCTCTGGATGAGGCCGTCTGGATTTCCAAATGATGTAACCTGCTCTCTTGCCGTGGATAGGAGTCCAAATAACGCATACCTGCCTCTGTTGGCGGCATTCTTGATTCTGGCTTCTATCACTGTGTTTTGGGCCTCTTTGCCTTATATACTCAGATGCAGTTGTACACAGAGGCTAAAGAATCGTATCTGCCATCGTGGATCTCAAAACTCCACAGAAATGaatgaGTTGAATAATGAACCTCCGGTGGATAGAAGCAAATCAAAGTCATCAAGGCTAAAGTCACTGGACACATTTCGAGGattCTCTCTGACGGTCATGGTATTTGTAAACTACGGTGGAGGCGGTTACTGGTTTTTCCAACATGCACCTTGGAATGGTCTCACAGTAGCGGATCTTGTGATGCCTTGGTTTGTGTTTATCATAGGTACGTCTGTAGTGCTAGCATTCACCTCGATGCATAGGAAAGGTGTTCCACGGCTACAGCTCCTTCGCAAGGTTACATGGAGAACCATCGTCCTGATGCTCATTGGTTTCTGCTTCATGAACTACAGCCCAAGAGATGGATATTTATCCTGGTCCTGGCTACGGATACCTGGAGTGCTCCAGCGTTTGGGTTTCACTTATTTTGTCCTGGCCCTGATGCAGACTTTCTCTCCCCACAGAGAGATCCCCTTGAGGGAGCATAACTGGTGGAACCCTATTCAGGATTTGGTTTTATACTGGCCTGAGTGGATCTTTATCGTGTTGCTGGAGACCATGTGGTTATGTCTCACTTTCCTACTGCCTGTTCCAAACTGCCCCACTGGTTATGTAGGAGCTGGTGGTATTGGAGATGGTGGTTTGTACCCTAACTGCACAGGAGGAGCAGCCGCGTATATAGACAGGTGGTTATTTGGGGATAACATCTTCTGGTATCCAACATGCAAGGTCTTGTATCGTACAACCGAGCCTTTTGACCCAGAGGGTGTTCTGGGTACAATTAATTCCATAGTCATGGGATTCTGTGGAATGCagGCTGGGAAGATTCTTCTATTTTTTCgcaaaaagaataaagatatCCTCGCTCGATTCCTCATTTGGGCCCTCATTCTGGGAATCTCTGCAGCCATCCTTTCTAAGTGCACAAGAGACGAAGGATTTATACCTGTCAATAAAAACCTTTGGTCCCTGTCATTTGTTACTTGCATGGGCTGCATGTCCTTTGTGCTGCTGGGTCTGATGTATTTCATTGTAGACATTAAGGAATGGTGGGGCGGACAACCTTTCATTTATCCTGGGATGAATTCAATATTTGTCTACGTTGGACACTCTCTGCTGGGATTTTACTTTCCCTTCAGCTGGGAGATGCGTTTTCAGGACAGTCATTGGGAACGGCTTTTCCAGAATATATGGGGTACTTCACTTTGGGTCTTCATTGCCTACTTGCTCTACCGCAAAAAATTCTTCCTTAAAATATGATACTGTTGATATTTTTGACTCATAAAAGtcattgcatttctttttaatttaagttacaggctaaaataaagttttaattattaaattattaagttTTAGCAACATTATGTTTAGGTATTCTatttaaaatccaaaataatttatattttttgtatttgtaagtGATAAATGTCTCTTCATGTCTGTAAATCTGAATTTGGGGTATTCCTGTGTCCAATTAGTTAATAGGCATAAGAACCGAAACCAAAGAATCAGATTTACTGTCTTCCATGGACACctgcagtgttttatttgatgTCAGTTGTGTTAAGACCTGAACGTAGTGATTAAATCAAATTCGCTGAAGTGGTACTTAACAAATTAGAACAAGCAATTCCACCACTTGAGGAGTAGCCATTATATATCGGTTGCCATGGCCACCCCCCCTCAGTGCTGTGAGACAGAGAGTGGGTACCATCTGCTCTTCAACTGACAGCCCTTTAATAGGGGTCAAGCTGGACGGCTTACTGAGGAGTGTTTCTGGGGCCAGCACTTTTCATGCTCACACTAATGCAAAATCAGGGAAATTACACCAGCAGATCTCATGCACATACGGAAATTACTGTGTAACACAAAAAACCCTGATGTTTTCTGTCAAGTCATATTCATGAGATCGAATAAAGTCACTAGCACAAGCTCTGGAGGCCCGGCGCATGGTACTTGAGTGGTTTTGAATTGAGATTTGTTAATAAGAATATGTGGAAAATTCCAGGAAAAGAAACTGATGTCTTAAAGGAGTAAGtcaccctaaaattaaaattctgtcatcgtgtACTCGTCCTCTTGCCCTTCCAAACACACACGTCCTAGACAAATAGTGTCCCGTCCTCAAGATGCTAGTTTTTTTGTTATCCTTCTTATGATTGTTCAGTCACCATCTGTGCTAAGAACACATTTCTGTTACTAAGcagataatattatattttattggtAGTGCAGATTTTTCCCAAATTTAGATTAGTTCTCTTCATTAGTGTTAACCCTGTCTATCGATATAtatgtattcttttattattattattatttttaatcaagcaTGTTTTGTTAGATTTCATCCTTTACTTCAATAAATTGTCTGCTCAA
>XM_043256044.1
TCAATATCATGcaagttttctcttttttcactcTTCTTTCAGCAGGGCTGTCTGAGAGAAACCCTAAAGtttatgaGCTGAAAATGGATGAGGCATTTCTAATATTCCACAACGAACTCCCTGTCTTTATCAGCCCCTTGTCACAGTTGGGAATGGTCAGAGCAATATTTCTGTGGTGGTGAGCACACAATTCACACTGACTCTAAAAATCACACCTGTGGATGAAAACGTCACTCTGTGCAGTCTGAGTCAGACGTTTGAGGAAGCTGGCCATTATTCTCTCTGGATGAGGCCGTCTGGATTTCCAAATGATGTAACCTGCTCTCTTGCCGTGGATAGGAGTCCAAATAACGCATACCTGCCTCTGTTGGCGGCATTCTTGATTCTGGCTTCTATCACTGTGTTTTGGGCCTCTTTGCCTTATATACTCAGATGCAGTTGTACACAGAGGCTAAAGAATCGTATCTGCCATCGTGGATCTCAAAACTCCACAGAAATGaatgaGTTGAATAATGAACCTCCGGTGGATAGAAGCAAATCAAAGTCATCAAGGCTAAAGTCACTGGACACATTTCGAGGattCTCTCTGACGGTCATGGTATTTGTAAACTACGGTGGAGGCGGTTACTGGTTTTTCCAACATGCACCTTGGAATGGTCTCACAGTAGCGGATCTTGTGATGCCTTGGTTTGTGTTTATCATAGGTACGTCTGTAGTGCTAGCATTCACCTCGATGCATAGGAAAGGTGTTCCACGGCTACAGCTCCTTCGCAAGGTTACATGGAGAACCATCGTCCTGATGCTCATTGGTTTCTGCTTCATGAACTACAGCCCAAGAGATGGATATTTATCCTGGTCCTGGCTACGGATACCTGGAGTGCTCCAGCGTTTGGGTTTCACTTATTTTGTCCTGGCCCTGATGCAGACTTTCTCTCCCCACAGAGAGATCCCCTTGAGGGAGCATAACTGGTGGAACCCTATTCAGGATTTGGTTTTATACTGGCCTGAGTGGATCTTTATCGTGTTGCTGGAGACCATGTGGTTATGTCTCACTTTCCTACTGCCTGTTCCAAACTGCCCCACTGGTTATGTAGGAGCTGGTGGTATTGGAGATGGTGGTTTGTACCCTAACTGCACAGGAGGAGCAGCCGCGTATATAGACAGGTGGTTATTTGGGGATAACATCTTCTGGTATCCAACATGCAAGGTCTTGTATCGTACAACCGAGCCTTTTGACCCAGAGGGTGTTCTGGGTACAATTAATTCCATAGTCATGGGATTCTGTGGAATGCagGCTGGGAAGATTCTTCTATTTTTTCgcaaaaagaataaagatatCCTCGCTCGATTCCTCATTTGGGCCCTCATTCTGGGAATCTCTGCAGCCATCCTTTCTAAGTGCACAAGAGACGAAGGATTTATACCTGTCAATAAAAACCTTTGGTCCCTGTCATTTGTTACTTGCATGGGCTGCATGTCCTTTGTGCTGCTGGGTCTGATGTATTTCATTGTAGACATTAAGGAATGGTGGGGCGGACAACCTTTCATTTATCCTGGGATGAATTCAATATTTGTCTACGTTGGACACTCTCTGCTGGGATTTTACTTTCCCTTCAGCTGGGAGATGCGTTTTCAGGACAGTCATTGGGAACGGCTTTTCCAGAATATATGGGGTACTTCACTTTGGGTCTTCATTGCCTACTTGCTCTACCGCAAAAAATTCTTCCTTAAAATATGATACTGTTGATATTTTTGACTCATAAAAGtcattgcatttctttttaatttaagttacaggctaaaataaagttttaattattaaattattaagttTTAGCAACATTATGTTTAGGTATTCTatttaaaatccaaaataatttatattttttgtatttgtaagtGATAAATGTCTCTTCATGTCTGTAAATCTGAATTTGGGGTATTCCTGTGTCCAATTAGTTAATAGGCATAAGAACCGAAACCAAAGAATCAGATTTACTGTCTTCCATGGACACctgcagtgttttatttgatgTCAGTTGTGTTAAGACCTGAACGTAGTGATTAAATCAAATTCGCTGAAGTGGTACTTAACAAATTAGAACAAGCAATTCCACCACTTGAGGAGTAGCCATTATATATCGGTTGCCATGGCCACCCCCCCTCAGTGCTGTGAGACAGAGAGTGGGTACCATCTGCTCTTCAACTGACAGCCCTTTAATAGGGGTCAAGCTGGACGGCTTACTGAGGAGTGTTTCTGGGGCCAGCACTTTTCATGCTCACACTAATGCAAAATCAGGGAAATTACACCAGCAGATCTCATGCACATACGGAAATTACTGTGTAACACAAAAAACCCTGATGTTTTCTGTCAAGTCATATTCATGAGATCGAATAAAGTCACTAGCACAAGCTCTGGAGGCCCGGCGCATGGTACTTGAGTGGTTTTGAATTGAGATTTGTTAATAAGAATATGTGGAAAATTCCAGGAAAAGAAACTGATGTCTTAAAGGAGTAAGtcaccctaaaattaaaattctgtcatcgtgtACTCGTCCTCTTGCCCTTCCAAACACACACGTCCTAGACAAATAGTGTCCCGTCCTCAAGATGCTAGTTTTTTTGTTATCCTTCTTATGATTGTTCAGTCACCATCTGTGCTAAGAACACATTTCTGTTACTAAGcagataatattatattttattggtAGTGCAGATTTTTCCCAAATTTAGATTAGTTCTCTTCATTAGTGTTAACCCTGTCTATCGATATAtatgtattcttttattattattattatttttaatcaagcaTGTTTTGTTAGATTTCATCCTTTACTTCAATAAATTGTCTGCTCAA

Function

symbol description
si:dkey-192p21.6 Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in mucopolysaccharidosis type IIIC and retinitis pigmentosa 73. Orthologous to human HGSNAT (heparan-alpha-glucosaminide N-acetyltransferase).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K10532 HGSNAT; heparan-alpha-glucosaminide N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256043.1 True 2994 mRNA 0.41 18 9523227 9548967
XM_043256044.1 False 2860 mRNA 0.41 18 9523227 9548876

Neighbor

gene id symbol gene type direction distance location
ret ret,LOC107726966,LOC107666456,LOC107743501,LOC107655443 coding downstream 3250 9498234 ~ 9519977 (-)
csgalnact2 csgalnact2,LOC107666416,LOC107559332,LOC107655442 coding downstream 25514 9491569 ~ 9497713 (-)
LOC122356541 LOC107655439,LOC107726945,LOC107601886,LOC107559330,LOC107743503 coding downstream 41808 9474220 ~ 9481419 (-)
tial1 tial1,LOC107655435,LOC107726955,LOC107743507,LOC107666496 coding downstream 72878 9443786 ~ 9450349 (-)
LOC122357054 itprip,LOC107726956,LOC107666382,LOC107601878,LOC107655423,LOC107559320,LOC107743607 coding downstream 113696 9405901 ~ 9409531 (-)
sgpl1 sgpl1,LOC107726953,LOC107601887,LOC107655444,LOC107559334,LOC107666355 coding upstream 4320 9553287 ~ 9564073 (-)
pdlim1 pdlim1,LOC107666525,LOC107726967,LOC107601889,LOC107655446,LOC107743498,LOC107559336 coding upstream 20131 9569098 ~ 9574575 (-)
rel LOC107726948,LOC107666554,LOC107601890,LOC107655447,LOC107559337,LOC107743496 coding upstream 35437 9584404 ~ 9594240 (-)
papolg papolg,LOC107601893,LOC107726947,LOC107666450,LOC107559338,LOC107743495 coding upstream 47859 9596826 ~ 9606503 (-)
LOC122356762 vrk2,LOC107718826,LOC107693217,LOC107560458,LOC107585344 coding upstream 517958 10066925 ~ 10079168 (-)
G92367 LOC107666417,LOC107726946,LOC107655437,LOC107743505,LOC107601798 non-coding downstream 68920 9451223 ~ 9454307 (-)
G92314 NA non-coding downstream 72539 9450396 ~ 9450688 (-)
G92295 gsto1,gsto2,LOC107655421,LOC107743610,LOC107666511,LOC107601880,LOC107726961,LOC107559317,LOC107666561,LOC107726960,LOC107559318,LOC107743609,LOC107601879 non-coding downstream 117567 9398804 ~ 9405660 (-)
G92289 NA non-coding downstream 182157 9340345 ~ 9341070 (-)
G92277 NA non-coding downstream 388742 9134152 ~ 9134485 (-)
G92391 NA non-coding upstream 46059 9595026 ~ 9595280 (-)
G92407 NA non-coding upstream 91502 9640469 ~ 9641201 (-)
LOC122356802 NA non-coding upstream 150046 9699013 ~ 10050383 (-)
G92427 NA non-coding upstream 151666 9700633 ~ 9700864 (-)
G92548 NA non-coding upstream 691299 10240266 ~ 10243061 (-)
G92267 NA other downstream 407676 9115093 ~ 9115551 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 1475326 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 1706848 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 3023654 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 3126801 6358201 ~ 6396426 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 625446 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 1083283 10632250 ~ 10634566 (-)
G92819 NA other upstream 1375977 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 1651585 11200552 ~ 11218985 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other upstream 1976436 11525403 ~ 11532457 (-)

Expression


Co-expression Network