zmiz1a (zmiz1a,LOC107588626,LOC108443181)


Basic Information

Item Value
gene id zmiz1a
gene name zmiz1a,LOC107588626,LOC108443181
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11033947 ~ 11146626 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256084.1
AGCGCTTTACGCGACTCTGGGACACATTTTGTCAGCAACCAGCAAGCATGGCTCTGTGGTAATAGAATAGCCCGTGTAATTTGACACTTCAACTTGCCGTGCACTACGTTAGTTGATTCAGACAGTCACACTAACGAAACGCCGTGCGCTTTTCTCTCAGTGTTTGTGAAGTGTGAGGGGAGAAAACAGATCGCAACTTCAAATCCCGGAGATTTTCGGCGCCGTGCTGTGATTGGACCTGAAAgtGCGGTGGACCCTAGTGTAGACGGGAGCTCGCAGAGGGACCTTCCCCACGGACTATATGAAGGGAGGGGAGGGGGAGGGGGGGCTGCTGATGTTACTCCCTGCTTGCAGAACACACAGATCACTTCTATGATTGATGAGGATATGTGAGTGAATTTGCCAAACACTGAACAAAGAAATCTACTGCATCCTCCGGGCCAACCACTGCTTATGCAGACAGGACCTGGCCAGAAGATCATGTGCTAATTAGAGAAGAACTTTAATGGCTTCCAGGTAGAAAGAAAGAGGCAGCAGTCAAGATGAACTCGATTCCTTCGATGGACAGGCACATACAGCAGACCAATGACAGGCTGCTGTGCATCAAACAGCACTTACAGAATCCGGCCAATTTCCAGACCGCGGCCACGGAGCTACTGGACTGGTGCGGAGACCCACGAGCCTTCCAGCGGCCATTTGAGCAAAGCCTTATGGGATGCTTGACGGTTGTAAGTCGCGTGGCCGCGCAGCAGGGTTTTGACTTGGACCTCGGCTATCGGCTCCTGGCTGTGTGCGCGGCAAACCGCGACAAGTTCACCCCTAAGTCGGCAGAaaccaccacctgcaggagatGTCAAAGTGACACAGCTCTCCTTTCGTCCTGGTGCGAGGAGCTGGGACGGCTGCTCTTGTTGCGGCATCAGAAGAATCGTCAGAGCGATCCACAGGGCAAAGTACCCTTGCAGCCGCCCATGAACTCCATGAAGCCCTCACTCTCACATGGTGATGGGTCCTTTCCATATGACAGCGTTCCCTGGCAACAAAACGCAAACCAGGCCCCGGGCTCGCTGTCGGTGGTCACAACGGTGTGGGGAGTTACCAATACATCACAAAGTCAGGTCTTGGGTAACCCCATGGCCAATACCAACAATCCCATGAACCCTGGGGGCAATGCACTAGGGTCGGGTATGTCAGGCAACAACCCAGGGATTAACTCACCTCAGTTCCCTGGCCAACAACAACAGTTTTCAGCCAAAGGGGGATCCAACCAGGCCTACATGCAGCAAAGCATGTATGGGCGTCCAGGGCACCCGGGAGGAGGAGGCTTTGGTGGAAGTTACCCAGGCGGACCGAATGCTCCGGGTGGCATAGGCATGCCCCCTCATACACGACCGCCCTCTGATTTCACCCAACCTGCTGCCGCTGCTGCTGCCGCCGCCGTTGCTGCTGCCGCCGCCACCGCAACAGCTACTGCCACAGCAACTGTGGCAGCCCTGCAAGAGACCAATAAAGACATGAACCAGTACAACCAGGTCTGCTCTTCTTTCCAGATGGGGCCTACGCAAGGCTACAATAACCAGTTCATGAACCAGCCAGGGCCCCGTGGGCCCCCGTCCATGGCTGGAGGCATGAACCCAGCTGGTATGGGTGGTGGCATGAATAGCTCCAATATGAGTGGCCCGCCAATGAGTATGAACCAGCCCAGAGGCCCAGGGATGGGGCCCTTCGCTGGCCACGGCCAAAGGATGCCTCAACAGGCTTACCCTGGACCCAGACCTCAGTCCATGCCCATGCAGGGCACAAAGAGGCCCTATCCAGGAGAGcctAATTATGGAGGCCAGCAGTTTGGACCCAATGGCCAGTTTCCCAACCAGCAAGGGCAGTACCCTAACCCGAACGCTTCTAGAGCTCTTCCTTCACCCAATTACCCTGGGCAAAGGATGCCGGGACAACAGGGATCTGGCCAATACCCACCTACTGGGGTAGCCATGGGCCAGTACTATAAGCAAGAGCCATTTAATGGTCAGAACAACAATTTCTCTGGAGGTGGTTATGGGTATAATCAAGGAAATGGGCCTCCTCGGCAGGTGGTGAACTACCCACACTCGCCAGTTCCTGGTAACCCCACGCCACCCATGACCCCAGGAAGTAGTATACCGTACATGTCGCCCAGTCAAGATGTCAAACCTCCGTTTCCTCCGGATATGAAGCCAAACATGACGTCTCTGCCTCCACCACCAACCAACCCCAACGAGGAGCTGCGTTTGACGTTCCCAGTGAGAGATGGAGTGGTGCTGGAGCCCTTCAGACTAGAGCACAACCTGGCCGTCAGTAACCACGTCTTCCATCTGCGCCCCTCCGTCCATCAGACACTCATGTGGAGATCTGATCTGGAGCTGCAGTTTAAGTGCTATCATCACGAGGACCGACAAATGAACACCAATTGGCCCGCATCCGTCCAAGTCAGCGTCAACGCCACCCCACTCACTATTGAGAGGGGCGACAATAAAACATCCCACAAACCCCTGCACCTAAAGCACGTGTGTCAACCAGGAAGAAACACCATCCAGATAACGGTCACGGCCTGCTGTTGTTCGCACTTGTTCGTGCTGCAGCTGGTCCATAGGCCGTCAGTGCGATCGGTCCTGCAAGGGCTCCTCAAGAAGAGGCTCCTTCCTGCCGAACACTGCATTACCAAAATTAAAAGAAACTTCAGTAGCGTAGCAGCATCCTCTGGGAATGCCACACTAAATGGAGAGGATGGAGTAGAGCAGACAGCCATCAAAGTGTCCCTCAAGTGTCCAATCACATTCCGACGGATCCAGCTCCCTGCTAGGGGACATGACTGCAAACACGTGCAGTGCTTTGATTTAGAGTCCTATCTGCAGCTGAACTGTGAGAGAGGAACGTGGAGATGTCCTGTATGCAAtaaaacagcattattGGAAGGGCTAGAGGTGGATCAGTACATGTGGGGAATTCTCAATGCGATTCAAAATTCGGAGTTTGAAGAGGTCACCATTGACCCTACGTGTAGTTGGAGGCCTGTGCCCATAAAGTCAGACATTCATATAAAGGAGGACCCAGATGGCCCTCTGGCCAAGCGTTTTAAAACCATGAGTCCCAGTCAAATGATCATGCCTAATGTGATGGATATGATCGCCCAGCTGGGTCCCGGCCCTTCTCCCTACACCCCCCTCCCCCCTCAGCATGGAGGAAACAATGGCGAATATGGGGGCCAAGGCAATAGTTACCAGGGCCATGGAAACTTTGACTTCTCCCACAGTAACTCTGGTGGCGGAGCTCCCATGAATGACTTCATGCACGGACCCCAGCTCTCACATCCTCCAGACGTGCCCAACAGCCTCATGGCCCCCGACAAGCCTCTAGCCCATGGCATGCCCGACTCGATGCCCCATCCCGTGAGCGCTGATCAATCCCATGCTTCCATGCAGCCAGGCATGCACGCATCCCCTCACCCCAACAGCCAGTCAGCTCAGCCATTGCATCACAGCGGCCCCCATCCTCCCAGCCCCCACGCCAGCCCGCCCCAGCAGCCAGGCCAAAACAGTCACCCACATGCCGACATGACCTTCAACCCCACCGTCGACGGGCAGGCAGGTGGCCAGGGACCTGCAGACATGCCCGAGCCTTCTCTGGATCTTCTACCAGAACTGGCGAACCCAGACGAGTTGCTGTCATACTTAGACCCTCCTGACCTCCCAAGCAGCAGCAATGACGATCTGCTTTCCCTTTTTGAGAACAACTGACTTCCTTCGGTCGGCCTTTTGGAGAGGCCCTAATTTGTTTGGCTGTCAGGAATCGAGAGGCACCTGAAGACTGACTCTGTACTTTGCAAACAGGAAACAGCCATCCTTTTGCCTCTTCCTCGTGTAAATATCTCACTCTTTTACAAGCAACCTTTTCCACACATATATGGCAGCCATGTTGGTTGGCACTAAAGTGATATCTTTCAATACTAATGGAAATACATGTGCAGCTATAATCAGTTCATATGAATACGTCAcacagaactgtgtgtgtgctcactAGGAAAGTATTGtagcatttttaattcagatttttttccttttgtgaaAAGAAGACCTGAatagaatatatgtatatgt

Function

symbol description
zmiz1a Predicted to enable nuclear receptor coactivator activity. Predicted to be involved in chromatin-mediated maintenance of transcription and regulation of transcription by RNA polymerase II. Orthologous to human ZMIZ1 (zinc finger MIZ-type containing 1).

NR:

description
PREDICTED: zinc finger MIZ domain-containing protein 1-like isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K22403 ZMIZ; zinc finger MIZ domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256084.1 True 4130 mRNA 0.54 27 11033947 11146626

Neighbor

gene id symbol gene type direction distance location
rps24 rps24,LOC107673958 coding upstream 40635 10990562 ~ 10993312 (+)
qrfpra LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699 coding upstream 44213 10986085 ~ 10989734 (+)
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding upstream 52163 10969343 ~ 10981784 (+)
spock2 spock2,LOC107668819,LOC107673954 coding upstream 82679 10924934 ~ 10951268 (+)
dnajb12a dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064 coding upstream 114276 10915644 ~ 10919671 (+)
ppifa ppifa,LOC107668776,LOC107588732,LOC107564349,LOC107673899,LOC108442288,LOC108263515 coding downstream 3370 11149996 ~ 11152447 (+)
LOC122356105 LOC107588620,LOC107707271 coding downstream 66873 11213499 ~ 11215087 (+)
cxcl18a.1 LOC107707282 coding downstream 68614 11215240 ~ 11217428 (+)
ercc6 ercc6,LOC107588615,LOC107668807,LOC107757150,LOC107708008,LOC107673869 coding downstream 140424 11287050 ~ 11302394 (+)
drgx drgx,LOC107588616,LOC107708289,LOC107668808,LOC107548637,LOC107673892 coding downstream 157438 11304064 ~ 11309190 (+)
LOC122356274 NA non-coding upstream 11891 11004910 ~ 11022056 (+)
G92748 NA non-coding upstream 49302 10984238 ~ 10984645 (+)
G92746 NA non-coding upstream 50668 10982940 ~ 10983279 (+)
G92731 NA non-coding upstream 72251 10959420 ~ 10961696 (+)
G92729 LOC107716350,LOC107673932,LOC107707381,LOC107588636,LOC107585302 non-coding upstream 86028 10820942 ~ 10947919 (+)
G92767 NA non-coding downstream 56028 11202654 ~ 11203684 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding downstream 221640 11368266 ~ 11368907 (+)
G92923 NA non-coding downstream 267597 11414223 ~ 11462116 (+)
G92952 NA non-coding downstream 362612 11509238 ~ 11509888 (+)
G92958 NA non-coding downstream 367851 11514477 ~ 11533930 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 65033 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 613521 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 784222 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1599342 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1869833 9161517 ~ 9164114 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 66900 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 108968 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 242759 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 425034 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 457071 11603697 ~ 11604852 (+)

Expression


Co-expression Network