gbf1 (gbf1,LOC107708418)


Basic Information

Item Value
gene id gbf1
gene name gbf1,LOC107708418
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 4837778 ~ 4904092 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256111.1
TTTGACAGGAAACATCAAGGTTGTGTGCGCCTGCACCATTTCCACGTCAGTAAGTTTGCCTGTGGAGGAGATTACCTACCGGTGACAGAATATCTGTCTTAGTGCTTTTACAGAAAAACAGCAGGGCATGACAACACTACGTGGAACTGTCTAAAATATTCACTATGGTGGACAAGAACATATACATCGTTCAAGGAGAAATTTCTGTTGTCGTCGCTGCTATTAAGAGGAACTCTAGATGGAGTACCCATACTCCTTTGgacGAAGAACAGGACCCACTACTCAACAGCTTCAGCCACTTGAAAGAGACCCTCAATAACATAAAAGATCTTTCAGATGTGGAACCCAACGTGTTTCTTAGACCTTTTCTGGAGGTGGTCCGCTCAGAGGACACAACTGGACCAATCACAGGCCTCGCTCTCACATCGGTCAACAAGTTTTTGTCATACGGCCTGATagATGCCAATCATGAAGGGGCAGCGGAGGGCATCGAGAACATGGCAGATGCGGTCACACATGCAAGATTTGTGGGCACCGACCCCGCCAGTGATGAGGTGGTGCTAAAGAAAATCCTCCAGGTTTTAAGGACTTTGCTGCTGACTCCAGTTGGAGCCCACCTGACCAACGAGTCTGTTTGTGAGATCATGCAGTCTTGTTTCCGTATATGCTTTGAAATGAGATTAAGCGAGCTGCTGAGAAAGTCAGCTGAGCACACGCTGGTGGACATGGTGCAGCTGCTCTTCTCCAGATTGCCACAGTTCAAAGAGGAGGCCAAGAGTTACGTGGGCACTAACATGAAGAAGGCTTACAATATCTTATGGAAAAACAAACGAGTGCAGcTAAAGATGAGAGCTGGGGGAATGAGCGAGTCGTCCAAGTGGAAGAAACAGAAGCGTTCTCCCCGCCCCCCTCGTCACATGGTTCGCAGTCCCTCAGGACAGATGGATACAGGCCAGTCCAGCACTCTCACCAACAACCTTTCAGGTGGAGTTCCTTTCATAGAGCAGCACAGCGGTTCTTCTACTCTTCCTGGTTCTGATAGTGCAGCGTCCTCCATCTCCAGCCCCACCACTGACAGCGGCTTAGACACAGGCTCTAAAACCACATCAAAGGAAGATCTCACAGACCTGGAGCAGAGCAGCTCAACGGCCAGCACTCCCATGACACCCTCCGCTGAGCCAAGCAGACTGGAATCACAGTCTGAGGGCAGGGAAGTGGAGCGTGCCCAGTCGGCCTCAGTCGAGTCCATTCCTGAAGTCCTGGAAGACCGAGACTTGCTGGCTGACCAGTCAGATTCGGCATCGGTTCACGACATGGACTACGTGAACCCCAGAGGAGTGCGCTTCACACAGTCAACCCAGAAAGAAGGTGCTGCTCTAATCCCGTATGGTCTCCCGTGCCTGAGAGAGCTCTTCCGGTTCCTCATATCTCTCACCAACCCACATGACCGCCATAACTCCGATGTGATGATGCACATGGGCCTCCAGTTGTTGAACGTGGCCCTAGAAGCCGCACACATCGCCCCCTACCAGTCGTTGCTCTGTCTTGTCAAAGATGAGCTCTGTAGGCACCTCATACAGTTGTTGAGCGTGGACCGAATGAATCTGTATGCCGCCTCCATACGCGTGTGCTTTCTTCTCTTTGAAAGCATGCGAGAACATCTGAAGTTTCAGCTTGAGATGTACCTGAAGAAGCTAATGGACATCATTACCTCAGAGAACCCTAAAATGCCCTATGAAATGAAGGAGATGGCTCTGGAGGCCATCGTGCAGCTCTGGAGGATCCCCAGCTTTGTCACAGAGCTCTACATAAATTACGACTCCGACTTTTACTGCTCCAACCTGTTTGAGGACCTCACCAAGCTGCTCTCTAAGAATGCCTTTCCGGTGTCTGGGCAGCTCTACACAACCCATCTCCTGTCACTCGAAGCCCTACTGACAGTGATTGACAGCACAGAGGCTCATTGTCAGGCCAAAGTGCTCAACAGCGCTGCACAGCAGGACCAGTCAGATTCAACGACTGTGGAAGGAGACAGTTCGGTCAATACAATCACCGATTCAACATTAGAAGCTGGCAAATCTGCACCCAGTTCTAATGGACAGACTTCTGTGGTGTCAGAAATGAGGACCACCTGTCCTCCCACCAGTGGTCATCTGATGGCAGAGAAGATGAGATTAGGCAGACAGGACCAGGAGGAGACAGACACGGAGAAGAAAAGTTTGAAGAAGCCTCATCGTTTTAGCAGCTGTCTTCCAGACTCTCAGGAACTTTTAGAGATCAAGAACAAGAAGAAGCTTCTGATCACGGGTACAGAGCAGTTCAATCAAAAGCCCAAGAAAGGCATTCAGATCCTGCAGGAGAAAGGGCTGCTCAGCAGTCCCATGGACAATAATGAAGTGGCCCAGTGGCTGAGAGAAAACCCCCGCCTGGATAAGAAGATGATCGGAGAGTTTATCAGCGACCGCAGGAACACTGACTTGCTCGACAGTTTTGTCAACACGTTCGCCTTCCAGGGCCTGCGCATAGACGAGGCGCTCCGCTTGTATCTGGAGGCATTCCGTCTTCCTGGCGAAGCGCCTGTCATTCATCGGCTCTTGGAAACCTTCACTGACAACTGGCATAAAGTGAACGGTAATCCCTTCCAGTCAAACGACGCTGGCTTCGCCCTGGCTTATGCAGTCATCATGCTCAACACCGATCAGCACAACCATAACGTCCGAAAGCAGAACATCCCCATGACGTTGGAGCAATTCAAGAAGAATCTCAAAGGTGTGAACGGAGGAAATGACTTTGATCAAGACATGCTGGAAGACATCTACAATGCCATCAAGAACGAGGAGATTGTGATGCCTGACGAACAGACAGGGCTGGTGAAGGAGAACTATGTGTGGAGTGTTCTTCTGCACAGAGGAGCCTCGTCTGAAGGGGTATTCCTGCATGTGCCTGAAAGCAGTTATGACCGCGACCTTTTCACCATGACCTGGGGACCCACCATAGCCGCCCTCTCCTACGTTTTTGACAAGAGCCTAGATGACACTATCATTCAGAAAGCCATCGCTGGATTCAGGAAATGTGCCATGATCTCCGCACATTATGGCTTCAGTGATGTCTTTGATAACTTAATCATTTCACTCTGCAAGTTTACTACTCTGAGCTCTGAGTCTGTAGAGAACCTGCCCACTGTGTTTGGCAGTAACAGGAAGGCTCAAGTTGCAGCCAAGACCGTGTTCAGCCTGGCCCATCGTCATGGTGACATTTTACGAGAAGGATGGAAGAACATCATGGACTCCATGCTGCAGCTTTTTAGGGCTGAGCTCTTACCCAAGTCCATGGTAGAGGTTGAGGACTTTGTGGACCCTAATGAGAAGATTTCCTTACAACGTGAAGAGACTCCATCGAACAGGGGCGAGTCGGCTGTATTGAGTTTTGTGAGCTGGTTAACATTGAGTGAACAGTCTGGCCACAGAGGCCCCTCCACTGAGAACCAGGAGGCCAAACAAGCTGCCCTGCTCTGCATAAAGCACTGTGACCCAGAAAAGCTGATTACCGAAAGCAAGTTTCTGCAATTGGAGTCTTTACAAGAACTCATGAAGGCTCTCATCTCGGTGACCCCCGATGAGGAAACATACGATGAAGAAGATGCTGCTTTTTGTCTGGAGATGCTGCTACGTATTATTCTTGAAAACAGGGACAGAGTATCATGTGTTTGGCAAACTGTACGGGATCATCTGTACCAGTTATGCGTCCATGCCAGTGAGAGCTGCTTCCTGGTGGAGAGAGCGGTGGTGGGATTGCTCAGACTCGCCATACGCTTATTGCGCAGAGAGGACATAGGCTCACAGGTTCTCCATTCTCTTCGCTTGCTGTTGATGATGAAGCAACACGTCTTGTCCAGAGTCTGTCGAGAGGTGGCCTTTGGCTTACACGAGCTGCTTAAAACCAATGCTGCCAACATCCACTGCACTGACGACTGGTACACGCTCTTTTCACTTTTGGAGTGCATCGGGGCTGGGGTCAAACCCCCAGCTGCCCTGCAGGTCGCCAACACCAACCCAGACAATGACACAGGCGCTCAGTCAGATAGCGAACTGAGTTCATATCATCAGAGTGAAGTTAGTCTTGACCGGGGATATACGTCTGACTCCGAGGTGTACACCGAGCACGGCAAATCCAGACTACCTCGTTCAGCTACCGATGTGGATGTGGGCTGGCTAGTGGTGGGGAAAGATGATCTGGATGGATCTAAGGCAGCAGTGACTCCAGGTTCAAAGCCCCTGACCCATCCTCTCATTAACCAGTACAGTTTAACTCTTGGGCAGGACATGGGTCTGCACGACACTAAATCCCTCATCAAGTGCGTGGATTCCCTTTCGTTCATCGTACGCGATGCTGCCCATGTCACTCCAGAAAACTTTGAACTTTGTGTTAAAGCCATACGAGTGTTCGTGGAGGCTAGCCTTAATGGAGGGTACCGCACCCACGAGAAGAAAAAGAGCCACAAATATGACTCCAAATCCAGCCGGCTCCGAAAGAAGCCACGCGAGAAGGAAGGCTCATCGAGGAGAACCAAAGTGTCCAGTCAGCGGCCCGCCCGTTCCCATAGTGACGATGAGGAGGACGAGGGCGTGCCGGCCAGTTACCACACTGTGTCTTTTCAGGTTAGTTTGGACTTGTTAGACCTGATGCACACACTGCACACGCGAGCCGCCGGCATCTACAGTTCATGGGCAGAGGAACAGCGCCATCTAGAGGACGCGGGCAGAAAGATTGAGGCAGACTCTCAAACACTATGGTCCAGCTGCTGGTGTCCTCTCCTTCAAGGTATGGCTTGGTTGTGCTGTGATGCACGGAGGCAAGTCCGCATGCAGGCTCTCACCTACCTACAAAGGGCACTTCTTGTACACGATCTACAAACCTTGGATGCGGTGGAATGGGAGTCGTGCTTCAACAAGgTCCTGTTTCCTCTGCTGACAAAACTCCTAGACAACATCAGTCCCGCTGATGTGGGAGGTATGGAGGAGACCAGGATGAGGGCCTGCACACTGCTTTCTAAGGTGTTCCTGCAGcatctctctcctcttctctctcttcccaCATTTGCCGCCCTCTGGCTCACCATTTTAGACTTCATGGACAAGTACATGCACGCCGGCTCCAGTGACCTTCTGCTGGAGGCCATCCCTGAGTCTCTGAAGAACATGCTGCTGGTGATGGACACAGCAGGGATCTTTCACAGCGCAGACTCCCGTACGGGCTACTCGGATTTGTGGGAAATCACCTGGGAGAGAATTGACTGTTTCCTGCCCCGTCTGAAGGAGGAGCTCTTCAAACAGGCTGTCATCCCAGAACCTGTGTGTAATGTTCCTGTGGAGCCTGTCCCACCGCCTGCTGCCGTGACCCCGGTCTGTCCCCCTGTGCCAGCCCCCTCACCAGTGCCAGCTGCTCCCGCAGAGCCAAACATCCCCAGCAGACCCGCGTCACCTCAAGATACGCCCACACCCAGTGCCAACGGTGATCGATCAGACAGATCATCTCCAGTTCCTCCCTCAACTCCTCCGATGCCCACTCCATCGAAGATATGTCCCCCCGAGTCCCCTCCGCCGCCTCTGAGCCAGTCTCCGCTCATCCTGCAGCCCCTCGCTTCTCCGCTGCAGGTGGGCGTCCCGCCGATGTCCCTGCCAATCATCCTGAACCCAGCCCTCATAGAGGCTACCTCGCCCGTGCCCCTGCTGCCCCGGCCCACCACCGACTGACCTGCCCCTCAAACATCAGCCCAAAGAGTGCCGCCACGTCTGACCGGACTGTTCTCCTGCACGTGTGCACTCGCTGTAGCCCACGCTATTAAATTATGTAACAGCGGGACCTGGAAGAAGAGCGCGCGAGAGGACATTGACATGCATGGCTGCCTCGCCGCTTCAAAAACATCAAAGCATCTCCCAAACCGCTCCGATTTGAATGTCCTTCAGCTAGAGATGTTACATAGATGACCGTATTTATTCAAAACGGGAAGGTGCCACCCTGGAGGGACGGTTCATTATTGATGGGACTGGATTCCGGTCGGGTTAAGAGCAGATTCGAGTGCATCAGAACTGGGTTGTTACTCGGGCAGTGATCACAGAGAATGGCTGATGGGAAGTGGGTCCAGCTAATGAAGGCgtgaaaaaaacatacattagtgTTGAAGCTTTTATCACCGCTCCGGCTTAATAAAACTGTACAGTACGATGAagaaaacgtaatttattttgaaaattcatATTGTTTCTTATCGTGGCTTTTACACTTTAATTACATAGTTTTGCCGTAAATTGCTCTGGAGGAAACAGTCAGATGTAGCCACGTAATGTTTGCCATCGATGGTTCATTAGGGAGAAAACTGAAAGCATAGTTCACCCACACATCAAAACATCATCACGTACTCGCCctgttgtttcaaacccgtaTGAATTTCTTCTGTTGTAAGTTGGAAAGCGAGCATTGCCATCAGTTGACTTTCTATTGCATGGaccaaaacatttctttaaacatCTCTGATGTTCCACGGAAGAAGGAAAGTCTTTCAGGTTTGGGGcaacgtgagggtgagtaaatcatgtgcatttttgggtgaaccgtctTTTTACGTCCATTTTTATTTggctaaaaacaacaaaatattgtttgttttgatgaCGCCGCGTAATTATCATGCATCCGTACAACATTCCAGATACACCGCTGATGTTTTCAACTAAGCGAACCAGCTTAACTCTGTaagtcaggttttttttttattttgatgggtatTATTTTATTCGTAACTTGTCTTAAAGAGAGGTGGTTTTGTTGTGCGTGTACATCGCTAAGGCACTACTGCTCTTTATAGCTTTCCTTCACAAGGATTTCTCCTGGAAAATACTAAAATTCTTCCAaatatatctttctttctattaaCTGTATCCCTTTATTGTGGTGATCTCGGCTCTGGAAGTTTACAGACCACTTTTAGTTTGCTATGAATTAATGCTTCACGAGAAGTAGATCTCAGAAGAGAACTATAAAATTCactaatataaaagtataatagcTCTCAGACCTGCACCTCCTTCCATCAGCCAAGACCACCCACGAGCAATCAAGTGCATTTAGCGATCAGCGTTTGACCTGAGACTTATGCTATGTTTGGATCAGTACCGAGACTGTAGCGTTTTTTTTTGAGGAGAGATACTGTAATTTAACAGCAGATCAATGTTCACACCATCACAGACGTAGGAGGTGGATCTGGACAGATGgacgttttcttttctttgtatgTGCACTTGTTGTACTGCATTGTTAGATACATCAGGAGCTAATTCTGTAGTCAACAGGtaattcaatgaaaataatctgtatatatatatatgaataaaagttaatgtactttttacaatgtaataaatatggtaaaatatCCTAA

Function

symbol description
gbf1 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within regulation of ARF protein signal transduction. Predicted to be located in Golgi apparatus. Is expressed in head. Orthologous to human GBF1 (golgi brefeldin A resistant guanine nucleotide exchange factor 1).

NR:

description
PREDICTED: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1

GO: NA

KEGG:

id description
K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256111.1 True 7438 mRNA 0.49 41 4837778 4904092

Neighbor

gene id symbol gene type direction distance location
hells hells,LOC107727385,LOC107586490,LOC107699304,LOC107708407,LOC107678596,LOC107589556 coding downstream 165528 4626388 ~ 4672250 (-)
galm galm,LOC107586487,LOC107699302 coding downstream 226670 4607224 ~ 4611108 (-)
socs5b socs5b,socs5,LOC107727375,LOC107586485,LOC107708402,LOC107699300 coding downstream 365828 4462022 ~ 4471950 (-)
prop1 LOC107727379,LOC107699286,LOC107586498 coding downstream 391490 4441892 ~ 4446288 (-)
ttc7a ttc7a,LOC107586483,LOC107678602 coding downstream 400286 4404523 ~ 4437492 (-)
ninl ninl,LOC107708420,LOC107589549,LOC107699311,LOC107727377,LOC107582480,LOC107678585 coding upstream 27327 4931419 ~ 4955793 (-)
sema4ga sema4ga,LOC107690158,LOC107582524,LOC107733683,LOC107678493,LOC107708465 coding upstream 104480 5008572 ~ 5040509 (-)
slf2 LOC107690156,LOC107582525,LOC107678590,LOC107567840 coding upstream 136472 5040564 ~ 5054042 (-)
wdr32 wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556 coding upstream 160206 5064298 ~ 5070193 (-)
pomk pomk,LOC107733691,LOC107582561,LOC107678554,LOC107567859,LOC107708470 coding upstream 166833 5070925 ~ 5073955 (-)
G90846 NA non-coding downstream 4634 4829751 ~ 4833144 (-)
G90842 NA non-coding downstream 86810 4750432 ~ 4750968 (-)
G90786 NA non-coding downstream 214974 4549111 ~ 4622804 (-)
G90785 NA non-coding downstream 252817 4560776 ~ 4584961 (-)
G90802 epas1,LOC107586486,LOC107727363,LOC107699276,LOC107589559,LOC107708405 non-coding downstream 267020 4545021 ~ 4570758 (-)
G91022 NA non-coding upstream 54291 4958383 ~ 4959411 (-)
G91025 NA non-coding upstream 60510 4964602 ~ 4964959 (-)
LOC122356716 NA non-coding upstream 224420 5128512 ~ 5129707 (-)
G91066 NA non-coding upstream 226259 5130351 ~ 5130949 (-)
G91085 NA non-coding upstream 356973 5261065 ~ 5262123 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 58046 4690882 ~ 4779732 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other downstream 148610 4672966 ~ 4689168 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 782365 4052743 ~ 4055413 (-)
wu:fj16a03 NA other downstream 881823 3951763 ~ 3955955 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 1402198 3422753 ~ 3435580 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 1016410 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 1157593 6061685 ~ 6073197 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 1316083 6220175 ~ 6227272 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other upstream 1454109 6358201 ~ 6396426 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 1549439 6453531 ~ 6499573 (-)

Expression


Co-expression Network