znf503 (znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531)


Basic Information

Item Value
gene id znf503
gene name znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 931312 ~ 937729 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256149.1
TAGGGTCTCGTGTCTTGCGCTCGCGGTAGCGCacttgaataaaagtatttatgcTGCTAAAATGCGCTTCATAGGACGCCActggaaatgtatttaaatggtcgtctttgtagaaaataaaaggattttGCCTGTAACTGTTCGTACCTGTCGTAGCGCATCGGAGCGCGTTTGTGTAATTTCAGagGAAGCGGCGCGTACGACAACCTGCATATTGCGCAAAATCTCCTCCCCCAAGTTGTCAAAATAGAGGCGCTTGCAGAAGGAGGAACGTCACATCCCCTTGACCCTCCAATCACCTCGGGGTCCCATTTGATTGGAAGGCGGCAAGGGCTTTAATCTCGGACTAATTCAGCTGCTTTTGAAGTGAAAATTTCTACCAGTTCTTGGTTTGGGAGGACAAGCGCGCGGACCTACGGGAAGAGACAGAGCGCGCGCTATGCCTGTGGTGTCACACGCGGCTCCGGATCTGCGATAGCCTCGCGCTCTGCCCCGCACGGATTATAccatttatctttatttctgcttttcGAAAGAAGATTgcgtttttatttatgaatctgATAAATGAAATACCAACACAATACGTGAGAATTGGGTCATGATCACATCGCCCTCTGCTTCAAGAAATAGTGATACCGATCTAGTCTGGGAAAGCAGCAGCGGCAGCAGCTCTCGGAATAACAGCTCCGCGGTCGTCAGCAAGCCTTTTCTCCATTCCGTCCCTCCTTCGGACCCTTTACGGCAAGCTAACCGACTTCCCATAAAGATTTTGAAAATGCTTACTGCACGCACAGGACACATTTTGCACCCTGAATATCTCCAGCCGTTACCATCCACCCCGGTCAGTCCGATTGAGCTCGACGCCAAGAAAAGTCCTCTGGCTCTTCTTGCGCAAACATGCTCTCAGATCGGTAAACCGGACCCTCCGCCCTCCTCCAAACTCTCCTCGGTAACATCAAACGGATCTAGCGAGAAAGAGTCGAAATCCGGCCCTTTAAAACTGAGCGACATCGGCGTGGAAGACAAATCCAGCTTCAAGCCGTACTCGAAGCCAGCGGATAAGAAGGACTCGTCCTCTGCGGTGTCTAACGGGGAGAAGTCTGGTTTCCGTGTGCCTAGCGCCACCTGCCAGCCGTTCACTCCCAGGACTGGCAGCCCTAATTCCAGCACCTCGGCTTCCCCGATGCCGTCAGACGGGAAGGGCGAGcgggatgaaaagaaagagtcTGATTGTAATAAAAACTGCACCTCGGACGGATCCGCGCCGACCAGCGTCAGCCACAGCAGGATAAGCGTGAGCTGTGCGGGAATTAACGTGGAAGTCAACCAGCACCAGGAAACCACGCCGGGATCCAAAGCGGCGACGTCGGAGTCCTCGTCGGTCACCTCCTCTTCCTCGGCCTCCGTCCTGGGGTCGGGACTTGTAGCCCCCGTTTCTCCGTACAAACCCGGGCAGACTGTTTTCCCTCTGCCCCCGGCCGGCATGACCTACCCTGGCAGCTTAGCGGGGGCCTACGCCGGCTACCCCCAGCACTTCCTGCCCCACGGTGGAAGTCTGGTCAACGCGCAGCTCGCCAGCTCGCTGGGCTGCAGCAAAGCCGGCTCGAGCCCCCTCGCCGGGGCGTCCCCTCCATCCATAATGTCTGCTAGCCTTTGTAGAGACCCTTATTGCTTGAGTTACCACTGTGCCAGCCATTTAGCCGGTGCGGCCGGTGCCTCCTGCACGCACGACTCTGCGGCCGCGGCCGCCGCGTCCGCTTTGAAGTCCGGATACCCACTCATGTACCCCACACACCCTTTACACGGCGTTCACTCCTCGCCGCCATCTTTTGGTGGACACCCTTTGTACCCCTATGGCTTCATGCTGCCCAACGACCCTCTACCGCATGTGTGTAACTGGGTGTCAGCTAACGGACCTTGTGACAAGCGTTTCTCGTCCTCCGAAGAACTTCTTAACCACCTGCGGACGCACACCGCGTTCACCGGGAGCGACAAGTTGATATCGGGTTATCCCAGTTCATCATCGTTAGCTAGCGCTGCCGCCGCGGCTATGGCGTGCCATATGCACATGCCGCCCTCAGGAGCCCCTGGGAGCCCCGGGACACTGGCACTCAGGAGCCCGCATCACGCGTTAGGACTAAGCAGCCGCTATCACCCGTATTCAAAGAGTCCGTTGCCTACTCCCGGCGCGCCGGTTCCGGTGCCTGCCGCCACCGGTCCTTATTACTCTCCCTATGCACTGTACGGTCAAAGACTCACCACAGCATCAGCGCTTGGAtaccagtaaaaaaaataaaaaaatccacacacatacacacatacacacacacacacacacagactttgtCCAAATTTATAGATTATAAAGATTGaatataaagacttttatatCATCGCGCCACTGAAGGACTGGATCCGTGGActcactgtatttatttatgtcgGCTTAAAGCGGACgataatacaaatgaaaatattcgAGCAACTCAGAAGTGCATTACATTTGAATTGAACTCTGTAGATAACGTGAAACACATGTTAGAGTACTAATAAAATAGGGGTCTTCAGTTGGATGTTGATTTGGAATTGCTATGATTGTATTGTTCGTTATTATTTAATGTCTCATTGAAAAGAAGATaatttacatgcatgtttgtttctTAAATCCCAAAACTGTCCACATGATTTGAAATTGCCGTTATTTTTCAGGTGTACACCACGGAGAGAGAATTGgtattttttgtatgtattcTGGAAAATAAGAAACAATTCTGTTCCATA

Function

symbol description
znf503 Predicted to enable metal ion binding activity. Acts upstream of or within embryonic camera-type eye morphogenesis and hindbrain development. Located in nucleus. Is expressed in several structures, including external yolk syncytial layer; mesoderm; nervous system; neural tube; and optic cup. Orthologous to human ZNF503 (zinc finger protein 503).

NR:

description
zinc finger protein 503-like

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0048596 embryonic camera-type eye morphogenesis biological_process
GO:0030902 hindbrain development biological_process
GO:0005634 nucleus cellular_component
GO:0005515 protein binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0001076 obsolete transcription factor activity, RNA polymerase II transcription factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256149.1 True 2784 mRNA 0.52 3 931312 937729

Neighbor

gene id symbol gene type direction distance location
LOC122357037 NA coding upstream 121892 808535 ~ 809420 (+)
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding upstream 253713 563819 ~ 677599 (+)
LOC122356635 LOC107698159,LOC107747466 coding upstream 390882 380963 ~ 540430 (+)
anxa11a anxa11a,LOC107721228,LOC107708439,LOC107698157,LOC107582500,LOC107589536,LOC107678500 coding upstream 611269 306723 ~ 320043 (+)
mocos mocos,LOC107698156,LOC107582499,LOC107678503,LOC107708374 coding upstream 625973 299033 ~ 305339 (+)
ifit8 LOC107747472,LOC107582559,LOC107690202,LOC107678487,LOC107577686,LOC107589567 coding downstream 73816 1011545 ~ 1014177 (+)
LOC122356862 LOC107747462,LOC107690182,LOC107582548 coding downstream 76583 1014312 ~ 1021027 (+)
tet1 LOC107582512,LOC107690175,LOC107747454,LOC107708452,LOC107589523 coding downstream 234127 1171856 ~ 1205536 (+)
eif4e1c eif4e1c,LOC107582514,LOC107690176,LOC107708453,LOC107747456,LOC108444323 coding downstream 270514 1208243 ~ 1214044 (+)
zgc:110319 zgc:110319,LOC107690174,LOC107582515,LOC107747453,LOC107708456,LOC107678512,LOC107589524 coding downstream 283426 1221155 ~ 1224114 (+)
G89675 NA non-coding upstream 242863 687427 ~ 688449 (+)
G89669 NA non-coding upstream 247540 683478 ~ 683772 (+)
G89635 NA non-coding upstream 426406 499262 ~ 504906 (+)
G89630 NA non-coding upstream 550901 380112 ~ 380411 (+)
G89627 NA non-coding upstream 552483 377357 ~ 378829 (+)
LOC122356899 NA non-coding downstream 22940 960669 ~ 965089 (+)
G89714 NA non-coding downstream 70133 1007862 ~ 1008216 (+)
G89718 NA non-coding downstream 83806 1021535 ~ 1021880 (+)
G89719 LOC108444242,LOC103386924,LOC107747461,LOC107690181 non-coding downstream 86844 1024573 ~ 1026667 (+)
G89721 NA non-coding downstream 89244 1026973 ~ 1029295 (+)
G89631 LOC107698159,LOC107747466 other upstream 253711 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 554741 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 694419 190797 ~ 236893 (+)
klc1a klc1a,klc1,LOC107721224,LOC107698151,LOC107708436,LOC107678539 other upstream 747874 150439 ~ 183438 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other downstream 70539 1008268 ~ 1011247 (+)
G89770 LOC107582509,LOC107690188,LOC107747458 other downstream 201430 1139159 ~ 1140195 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 404367 1342096 ~ 1345863 (+)
G89846 NA other downstream 531676 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 643629 1581358 ~ 1613330 (+)

Expression


Co-expression Network