mrpl14 (mrpl14,LOC107676385,LOC107679189,LOC107549148,LOC107734281,LOC107586084)


Basic Information

Item Value
gene id mrpl14
gene name mrpl14,LOC107676385,LOC107679189,LOC107549148,LOC107734281,LOC107586084
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16593300 ~ 16594640 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256179.1
GTCCTCCAGCGCTGCAGGTGGCGCTCAATTCGCTGCCATCGAATCAAtacaagaagaaaaaggaaacgTCGCTTTGTTATGACGCAGATTCGTGCATGACATTGGTGTGGCGTGAATGATCTGAGCAGGTCAGGATGGCCATGTTGTCGTCCGGCGTGTTTTTGCCCAAACTGATGCAGCAGAGGGCTTTCAGCGTCTCTGCAGCTGTGTCTGCTATTCAGAAGTTAACACGCGTGAGGGTGGTCGACAACAGCGCTCTCGGAAATGCCCATCACCACCGTCCACCAAAAGTCATTCACGTATACACCAAGAACGGAGTAGGTAAAGTGGGAGACAAAGTCTTGCTAGCCATTAAAGGACAGAAGAAGAAAGCTCTCATAGTGGGCCACAAGATGCCTGGAGATCGAATGACCCCACGCTTCGACTCCAATAACGTGGTTTTGATAGAAGAGAATGGAAACCCCACAGGAACGAGAATAAAAGTTCCTATTCCGACGAATCTGCGCAAAATGGAGGGAGAATATTCAAAACTGTTGGCGATTGCTCAGAGATTTGTttaaatgggtgtttttgtaTTCCGAGAGGTCAAATCTGAGGACAAAACCGCttaaatttgtaaatacattaaaaatgttcacgCCGTTCAGGTAATTCGCCTTCATGGTTACTTGTGGAATAATTTGCAATAAAGCATGTGGATGAAACCGTGA

Function

symbol description
mrpl14 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Predicted to be active in mitochondrion. Orthologous to human MRPL14 (mitochondrial ribosomal protein L14).

NR:

description
39S ribosomal protein L14, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02874 RP-L14, MRPL14, rplN; large subunit ribosomal protein L14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256179.1 True 710 mRNA 0.46 3 16593300 16594640

Neighbor

gene id symbol gene type direction distance location
mlh1 mlh1 coding upstream 22507 16564308 ~ 16570793 (+)
cpeb3 cpeb3,LOC107586080,LOC107719219 coding upstream 77596 16488877 ~ 16515704 (+)
ide ide,LOC107665588,LOC107549153 coding upstream 123807 16448734 ~ 16469493 (+)
opn3 opn3,LOC107549142,LOC107665579,LOC107747290,LOC107586115,LOC107719228 coding upstream 161291 16422784 ~ 16432009 (+)
cdc42ep3 cdc42ep3,LOC107549143,LOC107665567,LOC107676396,LOC107747292,LOC107719229,LOC107586113 coding upstream 203185 16381358 ~ 16390115 (+)
cdh23 cdh23,LOC107679169,LOC107676383,LOC107734258,LOC106579432 coding downstream 25642 16620282 ~ 16826870 (+)
smoc2 smoc2,LOC107724603,LOC107679127,LOC107734272,LOC107676362 coding downstream 239650 16834290 ~ 16867531 (+)
dact2 LOC107679215,LOC107724587,LOC107568117,LOC107676395,LOC107568524,LOC107734259 coding downstream 300244 16894884 ~ 16900363 (+)
zfyve21 zfyve21,LOC107724627,LOC107734304 coding downstream 381490 16976130 ~ 16985202 (+)
LOC122356173 marveld1,LOC107564681,LOC107664302,LOC107736855,LOC107665576 coding downstream 826981 17421621 ~ 17422822 (+)
G94365 NA non-coding upstream 35163 16557836 ~ 16558137 (+)
G94361 NA non-coding upstream 50362 16541185 ~ 16542938 (+)
LOC122356350 NA non-coding upstream 212224 16361672 ~ 16381076 (+)
LOC122356273 NA non-coding upstream 678354 15898871 ~ 15914946 (+)
G94176 NA non-coding upstream 805070 15774767 ~ 15788230 (+)
G94397 NA non-coding downstream 146827 16741467 ~ 16796842 (+)
G94481 NA non-coding downstream 291444 16886084 ~ 16925137 (+)
G94484 NA non-coding downstream 332274 16926914 ~ 16938654 (+)
G94501 NA non-coding downstream 427224 17021864 ~ 17030075 (+)
G94543 NA non-coding downstream 618307 17212947 ~ 17244969 (+)
G94324 NA other upstream 74474 16515827 ~ 16518826 (+)
nkx1.2la nkx1-2,nkx1.2la,LOC107601042,LOC107702751,LOC107665606,LOC107586110,LOC107719237 other upstream 688391 15901540 ~ 15904909 (+)
G94186 st3gal7,LOC107665608,LOC107601047,LOC107747259 other upstream 715878 15873444 ~ 15877422 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other upstream 721484 15864839 ~ 15871816 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other upstream 1275123 15314814 ~ 15318177 (+)
G94378 capn1a,LOC107549131,LOC107676389,LOC107586085,LOC107679188,LOC107734280 other downstream 3141 16597781 ~ 16605383 (+)
G94564 LOC107664233,LOC107736862,LOC107665565,LOC107747268,LOC107601026 other downstream 965656 17560296 ~ 17575938 (+)
G94760 NA other downstream 1844533 18439173 ~ 18439583 (+)
G94789 LOC107563058 other downstream 1942252 18536892 ~ 18537443 (+)
G94776 NA other downstream 1950712 18545352 ~ 18631718 (+)

Expression


Co-expression Network