zmp:0000001138 (LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445)


Basic Information

Item Value
gene id zmp:0000001138
gene name LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 19245604 ~ 19247578 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256196.1
ACGTCATGTGACTATCATGTGACTAATATGTTTTTGGTCGGTTTTAACAGAAACATTTCGGCTATTTTCTGCGAACCAAACTGCGTGAATGGACAATATGGGAATCATACAAACATTCATATCAATACTTCTGCTTTCTCCTCAGATCACCATGTGGACAGactACCAGACAGTAAATGTCCTGGCCTACACACGGATGACAGAGAATGGCTCCGTAGACCAGGCGGTGGTTGTTTTGGTGAATGATGCCCCGTTCGCATATTTCGACCAGGCAAATAAAACCTTTATCTTGCGTCCCAGTGCAAGCGCCGGCTTCTCCGTCTTAGAGAGCAGCGATCAGTCGTTCTGCATGTACGAGGTGCTAGCGGGATTTAACCGACAAACCGATTACCTGGagaaattcaaacaacaaaCTAATTCATCAAAAGCGCTTTTGGTACCTCCTTCAGTCAATGTGTATACTGAGTTTCCTCAACAGCAAGGAAAAGTAAACGTCCTTTATTGCCTCGCCACTGGGTTTTACCCTGCCGACattgaaataaacttttatcTAAATGGGCAGAGGTCCACCGCGAAAGCAGAGACCTCTGACTTAATGTACGGGGAAGACTGGAGCTTCAGAGTGTACAAGTATATGAACATCACCCCACAGCGTGGAGACAAGTATGCATGCGAAGTGAGACACAGCAGTATGGCTGAACCTAAAATGGCAGAGTGGAggcctgaattttcagcgtccACATCCCATCTGTACTGGATCTGTGCGCTACTTCTCGGCATGCTGTTGGGAATCACGGTATCTGTCCTGATTGTAAGAAGAAAACAAGTATAATGGGGGAAAACCGAACTGCATGTTCATCTGAGCAAAGTACAGAACTCATTTAAGTAGATGCAATTTCTGTAAATccatatttgccatttttatacCTGGTTTCACAGGCAAGACTGTAGTCccaggcaaaaaataaaataaaaatacatgtttgagTCGTTTTAGCTGAAACCAACATACACTGACATATCTTAAAATACGTCAGTGCCACGGATTTATAAGGCgtattaaaaacaatcaaataaacaaaactaatcTAATCTAGGGACCATAGGTGgcattttttaactaaatatctACAAATGTACTTTTTCCCCAACTTAATACATTATTGAACAAAAAccaatcaaataaacaaaaataagctAATCTAAACCCTGTCTGTAAAACcaggtttttgtgttttttggttaCTTTAAAATAACCTACTGTCATATTTATATGAACTGCCTGCtccagaaaaataaatgcataaacgataaataaacaaa

Function

NR:

description
PREDICTED: patr class II histocompatibility antigen, DO beta chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256196.1 True 1323 mRNA 0.40 4 19245604 19247578

Neighbor

gene id symbol gene type direction distance location
LOC122357016 fbln7,LOC107679196,LOC107754577,LOC107585467,LOC107733340,LOC107688955,LOC107597673 coding downstream 757 19222056 ~ 19244847 (-)
LOC122356839 acoxl coding downstream 236738 18975831 ~ 19008866 (-)
LOC122356218 vip,LOC107655780,LOC107585469,LOC107597641,LOC107679148 coding downstream 412656 18830268 ~ 18832948 (-)
slc29a1a slc29a1a,LOC107655740,LOC107733356 coding downstream 436024 18780375 ~ 18809580 (-)
LOC122356860 NA coding downstream 465365 18777668 ~ 18780239 (-)
LOC122357009 NA coding upstream 10808 19258386 ~ 19266509 (-)
golga4 golga4,LOC107724992,LOC107688375,LOC107733336,LOC107679131 coding upstream 115994 19363572 ~ 19399890 (-)
kcnk12 LOC107679129,LOC107585442,LOC107688640,LOC108430255 coding upstream 182258 19429836 ~ 19460397 (-)
fbxo11a fbxo11a,LOC107725019,LOC107679165,LOC107733352,LOC107588452,LOC108413220,LOC108430631,LOC107667079 coding upstream 258284 19505862 ~ 19532003 (-)
ntpcr ntpcr,LOC107557727 coding upstream 432667 19680245 ~ 19685333 (-)
G94997 mertk,LOC107724611 non-coding downstream 37335 19201843 ~ 19208269 (-)
G94978 NA non-coding downstream 75515 19169868 ~ 19170089 (-)
G94961 NA non-coding downstream 166765 19078560 ~ 19078839 (-)
G94941 NA non-coding downstream 328954 18916245 ~ 18916650 (-)
G94849 NA non-coding downstream 618292 18623483 ~ 18627312 (-)
G95068 NA non-coding upstream 177985 19425563 ~ 19427926 (-)
G95110 NA non-coding upstream 344294 19591872 ~ 19593376 (-)
G95147 NA non-coding upstream 422131 19669709 ~ 19670331 (-)
LOC122356282 NA non-coding upstream 570475 19818053 ~ 19835653 (-)
G95190 NA non-coding upstream 598723 19846301 ~ 19846534 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 270080 18957703 ~ 18975524 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 572711 18545571 ~ 18672893 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other downstream 1858598 17374750 ~ 17387006 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 2819069 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 2953225 16290154 ~ 16292379 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 38452 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 614952 19862530 ~ 19907062 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other upstream 661617 19909195 ~ 19921669 (-)
LOC122356211 gng4 other upstream 1017148 20264726 ~ 20275386 (-)
G95520 NA other upstream 1232347 20479925 ~ 20486704 (-)

Expression


Co-expression Network