LOC122357024


Basic Information

Item Value
gene id LOC122357024
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12022560 ~ 12024291 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256201.1
atgagCCATTCTTGTTCAGGATTCGGAGCAGCCACTATGTTCCAGAGAGATTACCAAAAGCAGAGTGATGAAATGTTACGTGTGGCCTTTGATGGTGATGGAGTCCTGTTTTCAGATGAGTCAGAGAGAGTCTACAAAGAGAAAGGTCTAGAGGGTTTCTTCCAAAATGAGTGTACCAAAGAGGGGACATCTTTGCCAATGGGTCCTCTGGCAAAGTTTTGTGAAGCATTGGCACATCTCAATAAGAAATTCCGGAAAGCCCCAAGCCCAAGTCCAATTCGTACCTACTTGGTAACATCACGTAGCACAGGCAGCCCTGGAATCAGAGCTCTGAAGACTcttcaggagaacaatctggaGATAGATGAGGCATTCTTTCTGAGTGGTGCCCATAAAGGGCCTGTACTACAAGCACTCAAACCTCACATATTCTTTGATGACCAGATGCAACATGTTAACGGAGCCCTTGAAAAAGGGGTTATTAGTGCTCATGTTCCTTATGGTGTACGGAATGAGTGAGAATCAAACCTAGTCTTATTTGTAAATGCGTGACAAAACCATACATCATTCTTGTCATGACTTCAttctgatcagtttgtttttggtcTCTGTCTAACAGTTtgccatgtgcttgtgttttcccTCCCCACTGTCATCTGATTAACCACTTcagctgccttctcacctgtggctccaAGCATAGCtggtattttttagttttactccTTTTGCTCACTCTGCCTCTTGTTTCCTCCAGACCTCTGTTCCCCTGTCCTGGCTCCTccagtgctgtgttttgtagTTCCTCCTCACCTGCTCCTTTTGGAGTACTCTACAAAGATCTTTTGCTGGGATGTTGGGACTGATGCAGAGACTATAAGAGCAGATTCCTCTACTCCAAACGCTCCTTGCCTAGCGGAGTGACTGGACACATGTTTATTGACCGCTTACTTGGTTATTTTATCTGTCTGGAATTATGTCTTCTGGCCCTCTGCCCCAGTCAAGTTTTTGTTAAGAGACAGGAAATAGATTTGAGTTCACACCTGCAACTTAATCCTTGTTCATTCCTGACAATTCTTTCTTCTGCAACATGATTTATAATGCCAGGAAAGTTAAATTTGGCACTTTCCACTGATGTTTTTAAGGCTTAAATTGTAAGTGAAATTAAGGCAAatgctgattttaaataattatattttaatcaataaatctttacctaaatgtcttttttctcCTGCATTCTTACTACAGTGCACGCATACAAACTGATATTTTGAACATATGAACATTTTACCAATTCCAAACCACATTGATCTTTTCAAAGACCAGAATCACATCCTCTTGCACCACTCTTTCAGTTTATCTGGCAGTAAATTTTTTGAGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256201.1 True 1388 mRNA 0.41 2 12022560 12024291

Neighbor

gene id symbol gene type direction distance location
osr1 osr1,LOC107588719,LOC107757107,LOC107668777,LOC107548611,LOC107675531 coding upstream 140683 11875804 ~ 11881877 (+)
hif1aa LOC107757129,LOC107675566,LOC107707991,LOC107548618,LOC107588596,LOC107668801 coding upstream 298200 11712438 ~ 11724360 (+)
prkcha prkcha,prkch,LOC107707065,LOC107675581,LOC107757130,LOC107668768,LOC100380676,LOC106598906 coding upstream 313852 11693923 ~ 11708708 (+)
slc38a6 LOC107548621,LOC107668833,LOC107588598,LOC107707073,LOC107757131,LOC107675562 coding upstream 332319 11681351 ~ 11690241 (+)
mnat1 mnat1,LOC107668823,LOC107707092,LOC107757134,LOC107675563 coding upstream 343948 11661587 ~ 11678612 (+)
LOC122357022 nt5c1ba,LOC107668815,LOC107707024,LOC107588591,LOC107585516 coding downstream 111 12024402 ~ 12029159 (+)
rdh14a rdh14a,rdh14,LOC107757127,LOC107675576,LOC107585474,LOC107668816 coding downstream 5160 12029451 ~ 12031896 (+)
mtres1 LOC107706999,LOC107757125,LOC107588589,LOC107681546,LOC107675559,LOC107585479 coding downstream 77682 12101973 ~ 12104666 (+)
sobpa sobpa,LOC107706905,LOC107681548,LOC107757118,LOC107585480,LOC107588585,LOC107675556 coding downstream 120347 12144638 ~ 12172343 (+)
slc66a3 pqlc3,LOC107706924,LOC107681540,LOC107675554,LOC107757120 coding downstream 155956 12180247 ~ 12183265 (+)
G93113 NA non-coding upstream 215314 11807028 ~ 11807246 (+)
G93006 syt14a,syt14,LOC107668771,LOC107757094,LOC107675522,LOC107548616 non-coding upstream 263951 11751939 ~ 11758609 (+)
G93001 NA non-coding upstream 294076 11727823 ~ 11728484 (+)
G92984 NA non-coding upstream 393994 11628359 ~ 11628566 (+)
G92974 NA non-coding upstream 403748 11566030 ~ 11618812 (+)
G93153 kcns3a,LOC107681537,LOC107588718,LOC107757122,LOC107708176,LOC107585531,LOC107675527 non-coding downstream 53346 12077637 ~ 12079902 (+)
G93166 LOC107681535,LOC107706968,LOC107588687,LOC107675558 non-coding downstream 74403 12098694 ~ 12099226 (+)
G93167 NA non-coding downstream 75315 12099606 ~ 12100355 (+)
G93169 LOC107588588,LOC107706947,LOC107681544,LOC107757121 non-coding downstream 80442 12104733 ~ 12107484 (+)
G93182 NA non-coding downstream 97648 12121939 ~ 12178466 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other upstream 417708 11603697 ~ 11604852 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other upstream 429960 11571660 ~ 11592600 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 609045 11389385 ~ 11413515 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other upstream 759940 11255594 ~ 11262620 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other upstream 804385 11213526 ~ 11218175 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 407628 12431919 ~ 12436643 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other downstream 478094 12502385 ~ 12535071 (+)
G93296 rrbp1 other downstream 547340 12571631 ~ 12575212 (+)
mgme1 mgme1,LOC107675546,LOC107654997,LOC107585523 other downstream 562595 12586886 ~ 12588998 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other downstream 1110182 13134473 ~ 13158440 (+)

Expression


Co-expression Network