golga5 (golga5,LOC107588574,LOC107705390,LOC107585491)


Basic Information

Item Value
gene id golga5
gene name golga5,LOC107588574,LOC107705390,LOC107585491
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12373606 ~ 12379217 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256217.1
GTTCCTGGTCCACGTCGGTCTGGATCAGGATGAGTACCAGGATAAAAACAGTCACCGATAAGCGATCAAGGGATCAGTAGACACAATTTGCCCTGATATCCTCCAAAACATGCACATGCAAGATTTATTTGCCGCTTTCTGAGATATCGAGAGCCCCTTCAGAAGACCTCAAGATGTCTTGGTTTGTTGATCTTGCTGGGAAGGCAGAGGACTTCCTAAATAAAGTGGACCAGGGTGCAGCCAGTGCTTTGACAAAAAGCACTCACAAGTCCTCCCTGTCCTACAACAGCCCTGACACCACAGATTCGATTCAGTACAGCTCCACTGAACTGCATGGGGACTCCATCTCCTCCTCATCCCATGAAACTTCAGCTTTCATCTCCGCAGCTGCTGGGAACATAAAGAAATCTAAAGCCACAGTTTTGGCCGCTACAGCTAATGTTTCCAGCACCATGTCTTTGGGTTCTAGCAGCAAGGCATCATCCAACTTTGTGcgacccaaaaagccagaagtaAATGATGATTTGCTATTTGACTTCTTGAATAGTTCAGACCCACCGCAGAGTGAAAGAAGGGAGGTCAGAAGAGAAACAGTGTCTAAGGTTTTGGGTCCAGCAGGGGGGTCAGTTCAGACCCAGATGCCCCCTATTTCTGTGGCTGGTGACCTGCAGGTTGGTCCCTCTGTTACTGCAACCCCATCATCAACACAGGGCCTTTCTAGAAATTCCAGCCTCAGCTCTCTTTCAAACAGCTCACACAGCGTTAAAACTGAGGATGGCTCCAAAGACCAAAGCCAAGCTGATGTTCATGAGGGTTTGAATCCAGGGCTGGATGTTCCCGCAGAGGCCCAGCCAGCACTGGAGATCCCATCTCAAGAGcttcagcagcagcaacagGGCCAAGAGCAGGTGATCTCCAACCTTCGTCTCGAGAACCAGCTTTTACGCAATGAAGTCTCTTCTCTCAACCAGGAAATGGCCTCTCTAATCCAGAGAGCCAAAAACATGCAGGAGGAGGTAAACGTTTCCAGGGCTCGTGCTGAAAAGTGGAACTCTGACCAGTCTCGTGTTGACCGCACGGTTCGAGAGCTAAGGGCCCAGGTTGATGACCTCACAGAAACCCTGTCTGCAAAAGATGGACAGCTGGCAGTCCTTAAAGTACGACTGGATGAGGCAGATCAGCTACTGAAGTCCCGAAGCTCTGCCCTGGAGGAAGCACAGAACGAAAGGGTCAGgATTCTTCAGGATCACAGTGAGGGAAGCAGTCTTCAGTCTCAGGCTTTGCAGACATTACAGGACAGAGTAAGAGACGCAGAAGCAGCAGTGAAGAGAGAACAGGAGAGCTACAGACAGATGCAGaGTGAGTTTGCAACACGACTGGCAAAGTTAGAGTCCGAGCGTCAGCAATTAGCGGAGTCATTAACAAATTCAGAGCGCCGAGTGACAGAAGAGAAACAAAGAGCTGAGGAACTACTTCAGCAAGTCAAGAGCGCCCGATCCGCAGCAGAGTACACCAAACAAGAGTTACAAGACTACAAAAACAAAGCCTCACGCATATTACAGTCTAAGGAGAAGCTGATCAGCAGTCTGAAGGAAGGCTCGGGTCTAGAGGTGCTGGAGGGAGCTGGGGCTGGAGTCGAACTCGAAGAGCTCCGTCATGAAAAAGAGCTGCAGAGAGAGGAGATTCAAAAGCTACAGGCCCAAATACAGAGCTTACGAACAGAGATACAGGATCTGGAAACACAGGCACTCACAGAGAATGAAAACTGGAGAGAACAGGTGGCAGAAGTACAGGAACAACATGGCCAGCAGATCAGAGCCAAACAGGAAATAGAAGCAGAACTGGAAAGATCTAAACAGGAACTTCAGTACATTGAGGAAGAGCATCATCGCACTAAAATCACCCTTCAGGGTCGCATCAAAGACAGAGAAGATGAGATCCAGAAGCTTAGAAACCAGCTGACCAACAAGGCTCTGAGCAACAGCAGTCAGGCAGAGCTGGAGGGCCGTTTGCACCAGCTGACAGAGACACTGATTCAGAAGCAGACCATGTTAGAGGCCCTTGGCACAGAGAAGAActctctggtctttcagctggaGAGGCTGGAACAGCAGCTGAAGAGTCTGCAGGGTGGTCAGAACAGCGGCTCACACATTAACATGGCTGCCATAGAAGGACCAGgTGCTAGGCAGAGGAACACACCAATCTTGTTTAATGATGCAGACGGACCAGGTACAGGAGTGTATGGGAAGGTTCGTAAGGCAGCCAGCACCATCGACCGCTTCAGTATACGTCTAGGAATCTTTCTCAGACGTTACCCTATGGCCAgggtttttgttattatttatatgGCACTACTACACCTTTGGGTAATGATTGTCCTTTTGACATACACACCAGAGATGCATCACAATCATCCTGATGGGAGATAAAGGCATTCTACCTGTAACAACACATAATAACCTGTTTGAGATTAGTAAGGGTTAATAAAGGTTAAGCTTAGGGAAATTTCAGGCTGCTGTACAGTGGcttattatgcattcattttcaatttgCACAGACATGCTGTTGGGCagttcttttttctctctctctgttactCTGTTTCTCTGACATTTCCCCTTGttcagcttttcttttttttgcccgTATGTGATTGAATGCTTTCAGTGAAATTTGGCATGAGTGTTAAGAACAgtataaagtgaaatatttaaggTGTAATTTAAAGGTGTGGTTTTATCAAAATGAGaatcttttgtcttttattcATCTTTCACGCAAATGTAATCATGACTATTTTTGTTACAGGAAATAACAGATTGTATTCCTCACACTGTAAAGCAGATTTctcttaataaatattaacacggacataa
>XM_043256218.1
GTTCCTGGTCCACGTCGGTCTGGATCAGGATGAGTACCAGGATAAAAACAGTCACCGATAAGCGATCAAGGGATCAGTAGACACAATTTGCCCTGATATCCTCCAAAACATGCACATGCAAGATTTATTTGCCGCTTTCTGAGATATCGAGAGCCCCTTCAGACCTCAAGATGTCTTGGTTTGTTGATCTTGCTGGGAAGGCAGAGGACTTCCTAAATAAAGTGGACCAGGGTGCAGCCAGTGCTTTGACAAAAAGCACTCACAAGTCCTCCCTGTCCTACAACAGCCCTGACACCACAGATTCGATTCAGTACAGCTCCACTGAACTGCATGGGGACTCCATCTCCTCCTCATCCCATGAAACTTCAGCTTTCATCTCCGCAGCTGCTGGGAACATAAAGAAATCTAAAGCCACAGTTTTGGCCGCTACAGCTAATGTTTCCAGCACCATGTCTTTGGGTTCTAGCAGCAAGGCATCATCCAACTTTGTGcgacccaaaaagccagaagtaAATGATGATTTGCTATTTGACTTCTTGAATAGTTCAGACCCACCGCAGAGTGAAAGAAGGGAGGTCAGAAGAGAAACAGTGTCTAAGGTTTTGGGTCCAGCAGGGGGGTCAGTTCAGACCCAGATGCCCCCTATTTCTGTGGCTGGTGACCTGCAGGTTGGTCCCTCTGTTACTGCAACCCCATCATCAACACAGGGCCTTTCTAGAAATTCCAGCCTCAGCTCTCTTTCAAACAGCTCACACAGCGTTAAAACTGAGGATGGCTCCAAAGACCAAAGCCAAGCTGATGTTCATGAGGGTTTGAATCCAGGGCTGGATGTTCCCGCAGAGGCCCAGCCAGCACTGGAGATCCCATCTCAAGAGcttcagcagcagcaacagGGCCAAGAGCAGGTGATCTCCAACCTTCGTCTCGAGAACCAGCTTTTACGCAATGAAGTCTCTTCTCTCAACCAGGAAATGGCCTCTCTAATCCAGAGAGCCAAAAACATGCAGGAGGAGGTAAACGTTTCCAGGGCTCGTGCTGAAAAGTGGAACTCTGACCAGTCTCGTGTTGACCGCACGGTTCGAGAGCTAAGGGCCCAGGTTGATGACCTCACAGAAACCCTGTCTGCAAAAGATGGACAGCTGGCAGTCCTTAAAGTACGACTGGATGAGGCAGATCAGCTACTGAAGTCCCGAAGCTCTGCCCTGGAGGAAGCACAGAACGAAAGGGTCAGgATTCTTCAGGATCACAGTGAGGGAAGCAGTCTTCAGTCTCAGGCTTTGCAGACATTACAGGACAGAGTAAGAGACGCAGAAGCAGCAGTGAAGAGAGAACAGGAGAGCTACAGACAGATGCAGaGTGAGTTTGCAACACGACTGGCAAAGTTAGAGTCCGAGCGTCAGCAATTAGCGGAGTCATTAACAAATTCAGAGCGCCGAGTGACAGAAGAGAAACAAAGAGCTGAGGAACTACTTCAGCAAGTCAAGAGCGCCCGATCCGCAGCAGAGTACACCAAACAAGAGTTACAAGACTACAAAAACAAAGCCTCACGCATATTACAGTCTAAGGAGAAGCTGATCAGCAGTCTGAAGGAAGGCTCGGGTCTAGAGGTGCTGGAGGGAGCTGGGGCTGGAGTCGAACTCGAAGAGCTCCGTCATGAAAAAGAGCTGCAGAGAGAGGAGATTCAAAAGCTACAGGCCCAAATACAGAGCTTACGAACAGAGATACAGGATCTGGAAACACAGGCACTCACAGAGAATGAAAACTGGAGAGAACAGGTGGCAGAAGTACAGGAACAACATGGCCAGCAGATCAGAGCCAAACAGGAAATAGAAGCAGAACTGGAAAGATCTAAACAGGAACTTCAGTACATTGAGGAAGAGCATCATCGCACTAAAATCACCCTTCAGGGTCGCATCAAAGACAGAGAAGATGAGATCCAGAAGCTTAGAAACCAGCTGACCAACAAGGCTCTGAGCAACAGCAGTCAGGCAGAGCTGGAGGGCCGTTTGCACCAGCTGACAGAGACACTGATTCAGAAGCAGACCATGTTAGAGGCCCTTGGCACAGAGAAGAActctctggtctttcagctggaGAGGCTGGAACAGCAGCTGAAGAGTCTGCAGGGTGGTCAGAACAGCGGCTCACACATTAACATGGCTGCCATAGAAGGACCAGgTGCTAGGCAGAGGAACACACCAATCTTGTTTAATGATGCAGACGGACCAGGTACAGGAGTGTATGGGAAGGTTCGTAAGGCAGCCAGCACCATCGACCGCTTCAGTATACGTCTAGGAATCTTTCTCAGACGTTACCCTATGGCCAgggtttttgttattatttatatgGCACTACTACACCTTTGGGTAATGATTGTCCTTTTGACATACACACCAGAGATGCATCACAATCATCCTGATGGGAGATAAAGGCATTCTACCTGTAACAACACATAATAACCTGTTTGAGATTAGTAAGGGTTAATAAAGGTTAAGCTTAGGGAAATTTCAGGCTGCTGTACAGTGGcttattatgcattcattttcaatttgCACAGACATGCTGTTGGGCagttcttttttctctctctctgttactCTGTTTCTCTGACATTTCCCCTTGttcagcttttcttttttttgcccgTATGTGATTGAATGCTTTCAGTGAAATTTGGCATGAGTGTTAAGAACAgtataaagtgaaatatttaaggTGTAATTTAAAGGTGTGGTTTTATCAAAATGAGaatcttttgtcttttattcATCTTTCACGCAAATGTAATCATGACTATTTTTGTTACAGGAAATAACAGATTGTATTCCTCACACTGTAAAGCAGATTTctcttaataaatattaacacggacataa

Function

symbol description
golga5 Predicted to enable protein homodimerization activity. Predicted to be involved in Golgi organization and retrograde transport, vesicle recycling within Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cisterna and Golgi membrane. Is expressed in axis; hatching gland; notochord; and polster. Orthologous to human GOLGA5 (golgin A5).

NR:

description
PREDICTED: golgin subfamily A member 5

GO:

id name namespace
GO:0048193 Golgi vesicle transport biological_process
GO:0007030 Golgi organization biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256217.1 True 2879 mRNA 0.47 13 12373606 12379217
XM_043256218.1 False 2876 mRNA 0.47 13 12373606 12379217

Neighbor

gene id symbol gene type direction distance location
trip11 trip11,LOC107655016,LOC107588575,LOC107585490,LOC107675555 coding downstream 615 12354697 ~ 12372991 (-)
fbln5 fbln5,LOC107585489,LOC107724235,LOC107588577,LOC107655017,LOC107705389,LOC107675578 coding downstream 22080 12341913 ~ 12351526 (-)
LOC122357133 tc2n,LOC107705388,LOC107654930,LOC107724545,LOC107588684,LOC107675517 coding downstream 31830 12333170 ~ 12341776 (-)
plek2 plek2,LOC107655018,LOC107705386,LOC107585533,LOC107724538,LOC107675532 coding downstream 42272 12327780 ~ 12331334 (-)
zfyve26 zfyve26,LOC107705383,LOC107655019,LOC107724201,LOC107675540,LOC107585484 coding downstream 50905 12298229 ~ 12322701 (-)
rtf1 rtf1,LOC107655008,LOC107588567 coding upstream 480 12379697 ~ 12391749 (-)
nusap1 nusap1,LOC107585493,LOC107724270 coding upstream 16564 12395781 ~ 12399528 (-)
LOC122356084 LOC107705397,LOC107654925,LOC107588565,LOC107675586 coding upstream 61822 12441039 ~ 12444878 (-)
btbd6a btbd6a,LOC107724364,LOC107588564,LOC107705400,LOC107655006,LOC107585501 coding upstream 78654 12457871 ~ 12461979 (-)
rrbp1a rrbp1,LOC107705351,LOC107654983,LOC107585504,LOC107675545 coding upstream 180941 12560158 ~ 12575184 (-)
LOC122357111 NA non-coding downstream 126666 12121940 ~ 12246940 (-)
G93315 NA non-coding downstream 206708 12114926 ~ 12166898 (-)
G93148 NA non-coding downstream 331677 12041695 ~ 12041929 (-)
G93144 NA non-coding downstream 336788 12036612 ~ 12036818 (-)
LOC122357025 LOC107585516,LOC108412594,LOC105899417 non-coding downstream 343984 11983711 ~ 12029622 (-)
LOC122356854 NA non-coding upstream 22454 12401671 ~ 12406933 (-)
G93392 jag2a,LOC107654986,LOC107705348,LOC107724379,LOC107675567,LOC107600569,LOC107585503 non-coding upstream 152764 12531981 ~ 12533886 (-)
G93394 NA non-coding upstream 154769 12533986 ~ 12535068 (-)
G93460 NA non-coding upstream 725862 13105079 ~ 13105684 (-)
G93470 NA non-coding upstream 777713 13156930 ~ 13158437 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other downstream 80012 12278454 ~ 12293594 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 574574 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 725571 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 841149 11525403 ~ 11532457 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other downstream 1154621 11200552 ~ 11218985 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other upstream 49980 12429197 ~ 12430778 (-)
LOC122356414 NA other upstream 177860 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 930735 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1141196 13520413 ~ 13558834 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other upstream 1185205 13564422 ~ 13568025 (-)

Expression


Co-expression Network