LOC122357054 (itprip,LOC107726956,LOC107666382,LOC107601878,LOC107655423,LOC107559320,LOC107743607)


Basic Information

Item Value
gene id LOC122357054
gene name itprip,LOC107726956,LOC107666382,LOC107601878,LOC107655423,LOC107559320,LOC107743607
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9405901 ~ 9409531 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256236.1
TAGCGACCTCGTGTGGGTACATTTATCATCCGCCTAGTAGTCACTAGCAGCTGCGTTCTCCaaaagaaagggaaagaaatatcaaataggagCGAAAACGGCCCCATCGGTCACTTCCTGGATGTGAGAGCAGATGAGGAAACAGAGTAACGGTACCGCAGCGCTTTCTCTTGTGTCGGTTCAGTAGGCCATCGTTCTCAAACAATGAACAACGCTGGATAACTCTTAACTCTTGGATTACAGTACACACAGTGAAGGATGCAAGGTGCTTTCGCACGGGTTTGCATGGTGGTAGTAGCCGCTATCCTCAACCACCCGCTGCTCTTTCCTAACGAGAACACCACCATCCCTGAGCAAGATGACGAGCTCCTGACCCGGATGAAGGAGCACCAAGAGAAGCTGGAGGCCGAGCAGAAGCGCCTGGAACAGGAGATCTCACAAACAGAAACAGCCCAGACGGATGATCGGGACAGTTACAGCTGGTACTTTTGGAGCACTCTCTGCCTAGTCATTTTCTTCACCATCGAGGTGTGCAGGCAGGATATCATCCCTACGGAAATGCCAGACTCCGCGGAAGATGAAGATGGAGATTCCAGTGTCGAATATCTCAGCGCTAAGACTGTAGCCCTAGATAAATGTGTTCTAAGCAACTTCTGCAAGACCCGCTTCCATCCTTTCATCCACGAGAGTGGGAGAGTGCGAGAGTTTATCGAGGGCTTTGCAGATGATCTTCTCGAGGCTTTGAGAAGTGTTTGCGATCGAGATTCTGACCTGGAGGTCGAGGAATTTGTTGGTATAGGGAGCATGTTTGAGTCCTGGAGCGTGTCTAAACCTCCCACATGTGACCTCATTGTGCCTTTTGCTCCTCCACGGCCGTTCAGCTTCCAGTTTCAGCTCTGGTGTGACCCCTCCACTGAAATTCCACTCGACATGCAAGGATGTGGAAGGATTAAACTGATAAAACCAGGTGGAAGTGGCACAGACTGTCTTTGTGGCTCAGCCAATCTCGGTGATGATATGCTGTGTCTGCTTCACAATAGACATGAGAGCGAAAAGCTTGAGGAACACACACTGGTGGAGCTCCTCTGTGAGAAGAACACCTCGTTTTTGTTGAAAGATCAGATCATGAGATGGTTCCAGATCTCGGTGAGCAAAGCGTGGGGACAGATCTCCCATAAGTACGATTTTGAGCTGGCATTTCGGAACCTGGACTTCCCTGGAGCTCTGAAAATCAGATTTAGGTCTGGAAAGACCATCATTCTTAACATCACCCCTGCCGTACAGTTTGAGGACACGGATGCTTTCCTCATCTCTCACTTCCCATCTGACACTAGTAACTCTTCAGACATTCACTGGCAACTCTCACTAACTGTTTATGAGAAGAACCTGCTTAAACATCTAGCAAAACGACTTCCTGCAAATTCGTGTCATGTTCACTGTCTTCAGATAGTTTGTTTCTTGCACAAAAAGCAGACGGCTTTGACTGGGAGAAGCGCCCTTTCCGATTACCATATAAAGACGGCGCTTTTGCATCTGCTGTTGAGTAAACGTGCTGCGATGTGGCAGCCGCAGAATCTCGATCACAGATTACGAGATCTGCTCAGCTTTCTGCAGCAAAGCCTGGAGGAAAAGAGACTATATCATGTTGTTGTTGGGAACCCTCGCATCCCAGTGGAAATTCTGGTTCCCAAAATAATCCGTACTGCAGAACCGATAAACCTGTTTAGGTCTCTTGTATTACAGAGGCACATATATGCCAAAATGGAGGAGCATTTTCAGGAGATGGTCAAAAATACCTCCGTGCTTGTTCAGGAATACACCCCACACTTTTCTAATGGTTACGTGAGACATGAATTTAGCTCGACAGACCAGACATAGACTTACTCACTGCTCTGGCTGTGAGTGCAGGGGAATTTTACAGCCTAATTGCATAATGACGTCATGCACTTCAAATGTAAGCAACATGTTAAGCATTGACTGTTTGTGGTGCTATGAGGATATTTGGGTGTTTCTTTAACTTTGGGCATATATGTTCCAGGGGCCAAATTTCaagttttacatatttgttaGATGTAGGTGATGTTAAATCagtcttttttaaacatttagttgta

Function

symbol description
itprip Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein).

NR:

description
PREDICTED: inositol 1,4,5-trisphosphate receptor-interacting protein

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256236.1 True 2114 mRNA 0.47 3 9405901 9409531

Neighbor

gene id symbol gene type direction distance location
plaua LOC107666402,LOC107726940,LOC107601811 coding downstream 19182 9382396 ~ 9386719 (-)
vcla vcla,LOC107666493,LOC107726962,LOC107655431,LOC108426801 coding downstream 28452 9342453 ~ 9377449 (-)
adka adka,LOC107601874,LOC107666490,LOC107743514,LOC107655429 coding downstream 68229 9207546 ~ 9337672 (-)
kat6b kat6b,LOC107601873,LOC107552931,LOC107725428 coding downstream 202482 9174923 ~ 9203419 (-)
slka LOC107667283,LOC107666433,LOC107725454,LOC107552933,LOC107601868 coding downstream 247351 9137489 ~ 9158550 (-)
tial1 tial1,LOC107655435,LOC107726955,LOC107743507,LOC107666496 coding upstream 34255 9443786 ~ 9450349 (-)
LOC122356541 LOC107655439,LOC107726945,LOC107601886,LOC107559330,LOC107743503 coding upstream 64689 9474220 ~ 9481419 (-)
csgalnact2 csgalnact2,LOC107666416,LOC107559332,LOC107655442 coding upstream 82038 9491569 ~ 9497713 (-)
ret ret,LOC107726966,LOC107666456,LOC107743501,LOC107655443 coding upstream 88703 9498234 ~ 9519977 (-)
si:dkey-192p21.6 si:dkey-192p21.6,LOC107601802,LOC107726935,LOC107666356,LOC107655416,LOC107559314,LOC100702339 coding upstream 113696 9523227 ~ 9548967 (-)
G92295 gsto1,gsto2,LOC107655421,LOC107743610,LOC107666511,LOC107601880,LOC107726961,LOC107559317,LOC107666561,LOC107726960,LOC107559318,LOC107743609,LOC107601879 non-coding downstream 241 9398804 ~ 9405660 (-)
G92289 NA non-coding downstream 64831 9340345 ~ 9341070 (-)
G92277 NA non-coding downstream 271416 9134152 ~ 9134485 (-)
G92276 NA non-coding downstream 272426 9133099 ~ 9133475 (-)
G92274 LOC107666432 non-coding downstream 279043 9126560 ~ 9126858 (-)
G92314 NA non-coding upstream 40865 9450396 ~ 9450688 (-)
G92367 LOC107666417,LOC107726946,LOC107655437,LOC107743505,LOC107601798 non-coding upstream 41692 9451223 ~ 9454307 (-)
G92391 NA non-coding upstream 185495 9595026 ~ 9595280 (-)
G92407 NA non-coding upstream 230938 9640469 ~ 9641201 (-)
LOC122356802 NA non-coding upstream 289482 9699013 ~ 10050383 (-)
G92267 NA other downstream 290350 9115093 ~ 9115551 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 1358000 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 1589522 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 2906328 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 3009475 6358201 ~ 6396426 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 764882 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 1222719 10632250 ~ 10634566 (-)
G92819 NA other upstream 1515413 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 1791021 11200552 ~ 11218985 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other upstream 2115872 11525403 ~ 11532457 (-)

Expression


Co-expression Network