srgn (LOC107601835,LOC107725442,LOC107666570)


Basic Information

Item Value
gene id srgn
gene name LOC107601835,LOC107725442,LOC107666570
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8410008 ~ 8413812 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256247.1
TTTCACACAGCACTGAACTGGGAAAACTTCTGTCTGACGTTCATCTCAACACATTTTCCTTCGCATCTTCTGCTTGACAGAGACAACAGAATGAGATTTTACCTCATAATAACTTTGGCCCTGGCAACAATATGCCTTTTGGGGGACGGAGGACTGGGAGCCCCAACCAAAGCCAGGTATATGTGGGTGAAATGCAAGCCGAAAGATAACAAAGCAAACTGTGTAAGACAAACGGGCCCCTTGGTGCCCCTAACAGGGCAAAGCTCTCGACTTCCGCCTTCTGCTGCAAAACACATATTCCCTGTTAGCACAGAGGAAGCCACTCCTGAGATGGAGGAGCAGTCAGGAGAGGGTTCAGGTAACTCAGACGCCTTCGCTCCTTTTATTAGCATGGATCAGAAGTTGATGAGAGATGAGAGAAGTCCAGAGCAAGAAGTCAACAAGAATGAAGAGGAGGGGTCAGCTGAGTTCAGTGGAGACTATGCTATACCTAAGGAAACAGAATGGCTTTCTAAAGaggttttgaaagaagaaaacattattgCATAAAGGGCTACATTAGATCTcatgtgctttttcttttcttatttttttttttttttgtacaatgtgAATCATAATGGATGCTGCTTTGGTCACAgatgtaattaaaacatattctAAAACTGTGGCATGCtctgcaaaaatgtattgtattccAGTTTGCATTGTAACAATcttaacttttatattattatttactcttaATGTCCAGTGTGACCTTTGATCCGCATCAAAACGATAAATTGATTTGGAATGGAAATATTGCTACATTAAACAGAGGCAACTTGAATAAAGTGTTTGGATAGCAAGaagtaaattttgtaaaaatgccgtattgtatttataatacattctgaactttaaaaaaaattacttttgaa

Function

NR:

description
serglycin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256247.1 True 923 mRNA 0.39 3 8410008 8413812

Neighbor

gene id symbol gene type direction distance location
vps26a vps26a,LOC107676600,LOC107666532 coding downstream 1363 8403168 ~ 8408645 (-)
supv3l1 supv3l1,LOC107725491,LOC107601833,LOC107666535,LOC107743553,LOC107676608,LOC107563062 coding downstream 7490 8396879 ~ 8402518 (-)
hkdc1 hkdc1,LOC107743550,LOC107725456,LOC107676583,LOC103047009 coding downstream 13699 8387046 ~ 8396309 (-)
hk1 hk1,LOC107676584,LOC107725457,LOC107666459,LOC107743551 coding downstream 28055 8368937 ~ 8381953 (-)
tspan15 tspan15,LOC107563042,LOC107601779,LOC107743619,LOC106612421,LOC106589828 coding downstream 48551 8343096 ~ 8361457 (-)
LOC122356335 kif1bp,LOC107666503,LOC107676599,LOC107743600,LOC107601781 coding upstream 2920 8416732 ~ 8422038 (-)
si:dkey-103j14.5 si:dkey-103j14.5,LOC107725445,LOC107666467,LOC107601805 coding upstream 67080 8480892 ~ 8501602 (-)
prim2 prim2,LOC107666539,LOC107725490,LOC107676604,LOC107743543,LOC108443732 coding upstream 171769 8585581 ~ 8640007 (-)
map3k21 si:ch211-120p12.3,LOC107743542,LOC107666507,LOC107552954,LOC108434955 coding upstream 233642 8647454 ~ 8663589 (-)
rgs17 rgs17,LOC107552952,LOC107743539,LOC107666476,LOC107676609,LOC107601843,LOC107725462 coding upstream 270145 8683957 ~ 8701125 (-)
G91916 NA non-coding downstream 141935 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 187393 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 242076 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 278160 8131243 ~ 8131848 (-)
G91769 NA non-coding downstream 368790 7997680 ~ 8041218 (-)
G91960 NA non-coding upstream 21214 8435026 ~ 8435920 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding upstream 51269 8465081 ~ 8468983 (-)
G91968 NA non-coding upstream 55460 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 177546 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 253684 8667496 ~ 8678386 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 362107 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 593629 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1910435 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 2013582 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2182736 6220175 ~ 6227272 (-)
G92267 NA other upstream 701281 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1760601 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2218438 10632250 ~ 10634566 (-)
G92819 NA other upstream 2511132 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2786740 11200552 ~ 11218985 (-)

Expression


Co-expression Network