dnajb12a (dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064)


Basic Information

Item Value
gene id dnajb12a
gene name dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10915644 ~ 10919671 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256345.1
GGGGTCAGGAAAGAGATCAGTCATCAGTTCCGCCGTCGCAATGGAATCAAACAAGGACGAAGCGGAACGCTGCATCGAAATAGCAATCGCAGCGCTGCGAGATAATGAGCTCGACAAAGCCAGGCGGTTCCTCGAAAAGGCGCAGAGACTGTTTCCCACCGACAAGGCGAGATCTTTACTAGAAACTATTGCTGAGAATGAAGGACCTTCCACAAGTGAAGAAAACATCAGAGAACACGATGGATTACGAAACAGAAGTCACAACACTGAAGACCACTCCTCTGGACAGAGTGCCACAGAATCAGCCAAACCGTACACATCAGAGCAGCTGGACGCTGTCAAAAGAATTAAGAGATGCAAAGACTATTATGAGATTCTTGGAGTCAGTAAAGAAGCGTCTGAGGAGGATCTGAAAAAAGCCTACCGAAAGCTAGCTCTAAAATTTCATCCAGATAAAAACCACGCACCTGGTGCCACCGAAGCATTTAAAGCTATAGGTAATGCTTACGCAGTTCTAAGCAACCCTGAAAAAAGAAGGCAGTACGATGTTTACGGCGAAGAAAAAGCCCATCCGACTCACAGGCACAGGACCTATCACAGAAATTTCGAGGCAGATATTTCCCCCGAGGACCTTTTCAATATGTTCTTCGGAGGTGGATTTCCCACCAGTAATGTGCACGTATACAGCAACGGCAGGATGAGGTTTGGCCATCAACAGCGACATGAACGGCGAGAACAACAGAGAGAAGGTGGCCTTGCCTTGTTTGTACAGCTGATGCCAATACTAATTCTGATCATAGTCTCGGCTCTGAGCCAGATGATGGTTTCCAGTCCTCCATACAGCCTCAGCCACAGACCATCCATGGGCCACACAAACAGGCGGCACACTGCAACTCTGAAGGTGCCTTACTATGTAGGCGACCACTTCTCAGAAGAATACACGGGGATGAATCTTAAAAATGTGGAACAAAGTGTGGAGGAGGACTATATATCAAACCTGAGAAACAATTGCTGGAAGGAGAAGCAGCAAAAGGAAGGCTTGTTGTATCGAGCGCGTTACTTTGGAGATGCAGATTTATACCAAAGGGCACAGAAAATGGCTACACCCAGCTGCTCGAAACTTTCAGATATACAGGTTCTGTTGCACGGTCATTGAGTAGAAGAATGTGGTGTCCTCTGTTGAGACGTCATTCGAAGATGATAACACACAGAAATGTTCTGTTCTCTTTGCTAAAATGGGACATTGCATCGCACCAGATCAGGAGAAGCAAAGATAGCCCGTCCTGGTGCCACATGGGTTCACTCTCATCTCTCCTTCAAAATCTTAGGAAAATTACATGGAAGATCTTACCGTCTGCGAAATGGTTTTATATATGGATTTAAATATGTAacgaattaaaaaataaagcattggaTGATTTAGAGAGGAAAGTACACAGCTGTTAAATGGTAATCAGCGCTGCtagcttacatttttttttttttttttttttatttagacctTTTCTTCTcgaaacattttttcaataccCATATTTGGGTTTTCTGAGCCAATTTTTAGTAGTGTCTGATCCATTTATCTGACCACAGGAAGTCAAATGATTACACCGGTGTCATTCAGCATTTAATGAATTGTTCACTGTGGTTTTTGCCtgttggatttttaaaaaagaatgtttGAGATTTATGCAAAtggaaaattaatatttgtatttattaaatggtATCATACtattttcttccattttaatttattttttgaaccTTAGAAGCAGtcattttaacagtgttttgCAGAGTGTAGATTGAGGGATTTAAAGCATAATCAAGTGCCTTGCCAGATCCAGTCTTACTGTATACTGTAAGTCTCTGCATTATGTAATATAGGAAGGAAAACATCAATGCTTGACATTAGTGCTTAGACCAATTAGCCACTAAAACTCGCTTggaagatttttattttcctccagattttgtttttttcagtgcaaactttttatgatttttttttttgtgtgtctgtatgtaatgtaacatagttacctaaaaataaataaataatattacatttcctTTTAATGAATTTAGAGTTGAAACATTTCGCATTCCGAAGTTATATTAAGCTCGTgacagtaatttttattt

Function

symbol description
dnajb12a Predicted to enable Hsp70 protein binding activity. Predicted to be involved in cellular response to misfolded protein; chaperone cofactor-dependent protein refolding; and ubiquitin-dependent ERAD pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human DNAJB12 (DnaJ heat shock protein family (Hsp40) member B12).

NR:

description
dnaJ homolog subfamily B member 12

GO: NA

KEGG:

id description
K09518 DNAJB12; DnaJ homolog subfamily B member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256345.1 True 2145 mRNA 0.40 9 10915644 10919671

Neighbor

gene id symbol gene type direction distance location
cuedc2 cuedc2,LOC107585308,LOC107716345,LOC107673918,LOC107588639,LOC107707447 coding upstream 30134 10881919 ~ 10885510 (+)
pax2a pax2a,pax2,LOC101463634,LOC107707401,LOC107668824,LOC107588637,LOC107716343,LOC107585307 coding upstream 87284 10796082 ~ 10828360 (+)
chst3a chst3a,LOC107708342,LOC107588701,LOC107673894,LOC107683746,LOC107585362,LOC107716304 coding upstream 226206 10681748 ~ 10689438 (+)
lrit2 lrit2,LOC107707486 coding upstream 246755 10663971 ~ 10668889 (+)
lrit1a lrit1a,LOC107585312,LOC107673966,LOC107716298,LOC107707479,LOC107588643,LOC108442250 coding upstream 251884 10659603 ~ 10663760 (+)
spock2 spock2,LOC107668819,LOC107673954 coding downstream 5263 10924934 ~ 10951268 (+)
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding downstream 49672 10969343 ~ 10981784 (+)
qrfpra LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699 coding downstream 66414 10986085 ~ 10989734 (+)
rps24 rps24,LOC107673958 coding downstream 70891 10990562 ~ 10993312 (+)
zmiz1a zmiz1a,LOC107588626,LOC108443181 coding downstream 114276 11033947 ~ 11146626 (+)
LOC122357062 NA non-coding upstream 151953 10753233 ~ 10763691 (+)
G92675 NA non-coding upstream 213541 10657508 ~ 10702103 (+)
G92671 slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 non-coding upstream 270407 10642556 ~ 10645237 (+)
G92563 NA non-coding upstream 605868 10309237 ~ 10309776 (+)
G92552 NA non-coding upstream 639466 10275584 ~ 10276178 (+)
G92731 NA non-coding downstream 39749 10959420 ~ 10961696 (+)
G92746 NA non-coding downstream 63269 10982940 ~ 10983279 (+)
G92748 NA non-coding downstream 64567 10984238 ~ 10984645 (+)
LOC122356274 NA non-coding downstream 85239 11004910 ~ 11022056 (+)
G92767 NA non-coding downstream 282983 11202654 ~ 11203684 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 495218 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 665919 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1481039 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1751530 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 1826523 9080848 ~ 9089121 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 45184 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 293855 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 335923 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 469714 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 651989 11571660 ~ 11592600 (+)

Expression


Co-expression Network