LOC122357122 (cul9,LOC107655624,LOC107669557)


Basic Information

Item Value
gene id LOC122357122
gene name cul9,LOC107655624,LOC107669557
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2916892 ~ 2951762 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256388.1
ACAGGCGAGCTGAACGCATACCTGTTCCACAGGAAGCAGGACAGGACTACACTTAACTATACAACAGGCAGCAAAAACGACTTCAGGCTGGGCAACGATACGTTACCACGGAGAAGAAAACTCCATCCACCCCGGGGGAAAGTCGAGAAGGAGGGGAGGCCCTGCAACACCGGAGCTACCATGGTGGGTGAGCGCCGCAACGGTAACCTGCTGGTTCAGCTGGGCCCGAAGCTGCAGGCTTACCCAGAGGAGCTTATCCGTCAGAGGAGGACTCACGACGGCCAGACGGAGTACCTGATTCGCTGGAGCCTGCTGGCCGTGGACGACAGCAGCAGCTCCGGCTGCAGCAATGAGGCGAGCGGCGGCAGCGGCAGCAGCTCCGGCGTCGGAGGCTCCAGTGGCTCCACCTCAGGAGAGAGCAAGAGCGAGAGCATCCTCATGTGGATGTCCACGGAAGACGTCTACGCCAACTGCCCCACTCTGCTGGGCAAGCGCAAGGCTGACTCCCAGAGGCCTCtgctggaggaagaggagcggCCCAGCGGCCAGTTCCCCGCTGACGTCACCTTCGACGAGGGAGAGCTCCTGGACATGAAAGACGACGTGAAGAATCTCGTGCGACGCGCCCGGAAGCAGATGGCCAAGAACAGCGACTTCGGGATCAGCATCACGCACACCATCCACGTGCTGAGCGCCTACGCCAGCATCGGTTCTCTGGTAGGGGTCTTCAAGGAGACCGGCGCTCTCGACCTGCTCATGGAGCTGCTCTGCAACAAGGAGCGACAGACCAGACGCAGCGCTGGCAAGATGCTGCGAGCCCTGGCTTCTCACGATGCGGGGAGTCGTGCCTATGTGCTGTTGTCCCTCAGCCAGCAGGATGGCATCGAGCAGCACATGGACTTTGACAACAGATACACCCTGCTGGAGCTTTTTGCAGAGACCACCTCCTCCGAGGAGCATGGCATCTCCTTTGAGGGCATCCATCTTCCACAGATTCCAGGCAAGCTGCTTTTCTCTCTGGTGAAGCGTTACCTGTGCGTCACTTCGCTGATGGACAAGCTGAACACGGCGGGGGTGGAGTCCTCCTCTGAGCGTCAGGAGGTTggcccctcctcctcctcctcggcaGCCTACCAATCGGAGCACGCTCGCGTGCAGCGGGAGTTCGAGTTCACCATGGCCATGGCTAACCTCATCTCAGAGCTGGTGCGCGTCATGGGCTGGGACCGTAACCGGCAGCTGCCCCTCAATTCCACAAGCTCCAGCAGAGGGCTTGAGGAGATGAACAATGAAATTCAGAAACACCCCGTCCGGTCCATCTTTCAGCCGCGCTTCTCTGCCGCCGTTTCCTTCATGGCCGCTACAGCAATGGCTGCGGTCACACcaccaaagaagaagaaaacggCTAATGGTTTCAAGACTCGTTCTGACTTCACTTCCCGCTCTGCTTATGTGGAGTATGTGCAGGACAACCTGAAGAGCGGCATGATGGTCCGTATGCTGGAGGACTATGAGGAGGTCAGCGCCGGGGATGAAGGGGAGTTTCGTTACAGTAACGACGGCTCTCCGCCGGTGCAGGTGTACTGGAACTCCCTGTCCAGGACCTACTGGGTGCACTGGCACATGATCGAGATTTTGGGCAACGGCAGCGGAGGACAGGCGGAGAAAGAGACCCAGGAGAAGGCTTCGTCCCTCACAGAGACACTCAAACTCACTACTGTGAGTCAGACGTTCTTCTCGAAGCCCCCCGGTGGGCTGTACACATTGCCTTACTTGATGGAGGGCTCTCAGGATGACGCAGGCACCCTGAGCCGTGCTGAATGGTGGGAAGTGCTGTTTTTCATCAAGAAGCTGGAACCCAAGCAGCAGCAGGAGATCAACGGCATCCTGCGACAGAGCCTCGATGAGCCGATGGTAGAGCTTGACGAGTCGACTCTCATCCAGCTGTCCCTCTCGAGTGAAGTAGCACGGAAAGTCCTCCACTACCTGAAACAGAGCTTGCAGGCGTCTTGTTTGGGAGACCTGCTCTGCTCACACACCTTCATCAAGCACTACCTGAACTGTGGCGGCGCTGGCCTCGAGGATGAGGAAATGCTGATGGGCAGCTCGATCGGAGGACAAGGAGCTTCGTCCTCTTCGTCGCTGTCCTCCGCCACAGCATCGTCCTCTTCCTCGGCTTCTTCCTGCACCATGGGCTCCGTGTCCAAGAAAGCCAAGAAGGAGATCCCAGCAGACACGGGCAGCTGTGGCAGCGAGACAGAGAGTGAACTTCCCACCGAGGATGACACAAAGTATCCTGATGACCTGGAGGAGAAGATGAAAGTGTTCAACAGTCCGAAGGTGCAGGGTAAGAAGAGCTCGCTGGAGAAGATGGGGGAGGTGGTGGACATCATGAAGAAGAGCAGCTCAGACTCGGGACTGCAGCTGGCCGGCATGAAGGTCATCGGAAAGATCCTGGAGGAGGAGGGACCTCAAGAGAGGAGCACCCTCAGATCAGACTCGGCGCAAACCATCCGCGACAAAGCCTTAAAGATGCTGGTGGAGATGATTGGCAGTCAGCCCAAGCAGAACGCTGTCACCGCGCTGCTGCTGACCCGCAGTCTAATGCTGAAATATGAGTGGAGGGTCTCATTCGCCACCGAGGGGGGTGTTAAGGCCATCCTGTGCTGCATGCAGGAGTATCCTGTCTGTATACAGGTGCAGCAGATCGCACTGGCGACTCTGAAGGTCATCACGGGTGCCAGTAAACACGACCCTCGCAGTGTGGGTGGCTGTCTGCCCCTTTCTGAGTCTGGCACTCAGATGATGCTGGAGATTTTTGCGAGCATAGGCTCCGCTACACCCGAAGGCTCCAAAGGGCTCCTGTGTACCATCCCTTCTGCCATCGACCTCATGCTCAGCACGACGGGTTGCGGTCTATCCGTGCGGAACGGGCTGCTGGTCATCATCATGCTGATTTCCAGCCACAAGAGCCTGGCAGAGCAGCTAGTCGCCTGCAATGTCAGTGCCACGCTAAAGAAGTGCCTTTCTGCTCAGAATCAACACAGCATGCTGGCTATTATCGCCCTCAACCACATCTCCATGGTTCACAAACTGGAGAAAAAAGAGTCTCAAGATGAGCATGACTTTAAGGACACAGAGCTGAAGATGTTGGTGGTGAGTCTGAAGGAAATGCCAGCCACTAAAGAGGTTATACTGACTCTGGAGCAGCTGCTCTGTGACGACGCCTCCCagctggaggaagagaggaacGAGGTAACGCGCAGCAGAGACACCTTCCAGGACCTCATCCGCCTCATGGACCAGCACAGAGTGGATCGGGCGGTGCAGCTGTCCATCCTGAGgattttaaacaagtttttgGATAACTACCAGGAAGACCTGTTGCCGTGGCACGAGAGTATTGAGCCTTGCCTGTCGTCTATGACGGCGTTTGTCAGTGACCGGGAGGTCGTACAGCAGTTTATCCGCTTCTTATATCGACTTGCATCTCTGAATAAAGACTATGCCGTTGTGATGTGTCGGCTGGGCACCAAAGAGGCTCTTATCAAAGCCGTGGACAAACACAGCACCAGCTTGCTGATGGTCACAGAGCTGCGGGATCTGATCAACGACTGTGAGAAGTACGCTAGCCTCTACAAGAAAATGACCACCAGTGTTCTGGCTGGATGCATACAGATGGTGCTCGGTCAGATTGAAGAGCATCGTCGCAGCCATCAGCCCATTAATATTCCTTTCTTTGACGTGTTCCTGCGCAACTTGTGTCAAGGCTCCAGTGTGGAACTGAAAGAGGACAAATGCTGGGAGAAGGTGGAGGTTTCCTCCAATCACCATCGAGCTAACAAGCTGACAGACAAAAACCCAAAAACCTACTGGGAATCCAACGGCTGTACCGGCTCCCATTTTATcaacatttacatgcataaaGGGGTGATCATCAGGCAGCTGACTGTGCTTGTAGCCAGTGAGGACTCGAGTTACATGCCAGCTCGCATTGTAGTCCTAGGAGGAGACGATCCCACAAACATCAATACTGAACTCAACACTGTAAACGTGGCCCCCTCCGCCAGTCATGTGGTTTTGCTGGAGAACATGACCCGCTTCTGGCCTATCATTCAGATCAGAGTCAAAAGATGTCAACAGGGTGGCATTGACACACGAGTGCATGGGTTTGAGGTCCTGGGGCCGAAGCCTACGTTCTGGCCTGTGTTTAAGGAGCAGCTGTGCTGCCGTACTTATCTCTTCTATACGACAAAAGCTCACACCTGGTGCCAGGAGATCCTGGAGGACAAGAACCAGCTGCTGCAGCTCTTTAACAAGTTAAACAGCGCCCTGAAGCATGAACAGATGTTTGCTGACCGTTTTCTGCCTGACGCCGAGGCTGCAGAGGCTTTAGGGCGGACCTGCTGGGAAGCTCTCATCACCCCCATCGTGCAGAGCATCACTATCTCAGAGACATCGACTCTCAGCCCTCTGTCATGGCTGATGAACGAATATTTGGAGAACACTGAATCCTCCAAGAGATGTAAGAGCTCAGCCTCCACCTTCAACTCGCGTGTGCGGCGTCTCACTCATTTGCTTGTCCACGTGGACACCAGCACAGTCGATACAGAAGAGCTCAAACCTCCCATCAAATCCAaagGTATCAACAGAAGCAGAGATTTGAAGAatggTAAAGAGGGCAAGAATAAGGAAACGACGGCAGTGAGCTCATCTTCATCCTCAGGCAAACCAAAAGTGAAGAATACAAGCAGCATCGCAGGCATTGCTTTGTGCTGGCAGGGTGTCGTTCAGCGACAGGTAAAGAGTTTCCTGGATTTGACTTGCAGCCTCCCTGACTTCGTAGAGCGCTACAGGGGTCTGTTCCTCCGGCTAAAAAATGCCATGGAGGAACTTTTTGGTCAACACACTGCCTTTGTGCTTGCCCTCCGTCAGGGCTTCTCCGCCGCCTTGCTCCAGCTCTCCATCCTGACCGCTATGCATGTGAGCGAACGTTTTGCACAGTACATAGACAAGATGATCCAGGAAAGTGGAGTGGACTCTGGAAATGTGGACACCTTGAACCAGCTGCAGCAGTTCCTGGAGCCCATGCTGTTTCTCTCGGGTCTGGAGCTGGCCAACACCTTTGAGCACTTTTACAGGTACTATCTGGGAGATCGGCTGCTGGGTCAAGGGAAGGTGTGGTTAGAAAGCGCTGTGGTGGAGCAGATCGGTACCTGCTTCCCGAACCGGTTTCCCCAGCAGATGCTGACCAACCTCAGTGAATCTGAGGAGCTTCAACAGGAGTTTCATCTTTACCGCCTACAGCAACTGGACAAAAACCTGGAGGACTTTGAGGAGATGATGGATGAGGACGTGTCTGAACTCGAGGAAGAGAGTGACGTGAAAGTGTTGGTGTTGTCCCCGCGCTGCTGGGTTGTGTCTGCTCCCTGCTACCTCGAGGACCCCAGCAAACACTTCCCTGCCCAACTCTGCACTTACCTGGCCGAATTCACAGACTTTTACGCCAACGGTCAGCGCATGTATAGTTTGACTCACAGTAAGCCTCGGCGGCTGCAGTGGACGTGGCTCGGACACGCAGAGCTTCAGTATGGCTCCTCTACTCTCTACGTCTCCACGCTGCAGATGTACATCTTGCTTCAGTTCAACAAACATGAGGACGTGAACGTGGAGATGTTGCAGCAGGCCACGGGTCTCTCTCCAGCCATGATGAGCCATGCCCTCAAACCTCTCACTGCAGAGAAAGGGGTTCTCACTCACACCGGCTCCAGCCAGGACCCCATGAAAGgGGTCCTGAGACTGAACAAGAAGACGCTCTCACAGAGCTCAGAACGACACGGTTACCATTTCCTGCTTCCCAAGCAGACCTACCTGAATGTGGATGAAGATGCTGCGCTCACGCtagagaggaagaggaactACATCTACTGTCTCATTGTGCAGATCATGAAGAATGAGAAGGAGATGCATATAGACAATTTAGTGTTTATGGTGTTGGACCGGTGTCAGAAGCAGGAGGGCAGTCGGACTCACCCCTCGGTCCGCTTCAGCTGCAGCACTACAGACGTGCTCTCCTGCATCATGCACGTCATCAACAAAGGCTACCTCCGCCGCAACGAGGAAAGCCCGCACATCGTGGAGTTCTTGATGGAGGACCCGTCCACTCCCCGCAAGGGCCAGGCGCAGTTCTCCTTTAAGATGGACGTGAAAAAAAGCTCAGCGagcagcagcggcggcggcAAGGCCGACACCAGCCTGGGAGGCCTAATAGTTCCCCCGCAGCATCCGGAGGACGGCGTGCTGGAGGCCGTGCTGTTCTCCATGGGTCGCACAATGACCCAGGAGGAGGTCAAGCAGCTGATGCAGCGCACCGTCCAGCAGGTGGCGGGGACCCTGAGCCTGGATCTGGACCGGGCCGAGCACCTGCTCATTCACTGCAAATGGAACGTGGATCTGTTGATCCAGCGCTACACGGACGACCCAGATGCCCTGGTGCTGGCTGCCGGCCTTAAGATCCGCAACCCCCAGCCGGCCCCCGTCCCCGTGGCCCACTGTCCCGTCTGCCTCTCCCAGTCCAAAGAGAGTGACCCCCCTCCCATGCTCTGCTGCATGCACTACTGCTGCAGGTCCTGCTGGCAGGAGTACCTCACCGCTCGTATCGAACAGAATCTGGTGATGAACTGCGACTGTCCGATCACAGACTGTCGGGCTCAGCCCACTTCCAAGTTCTTTCACAACATCCTCACAGATAAGGACACCATTGCCAAATGTACGTACAGGTCAGCACTCTCACGCTCGGTTATGTGGCGCCCTTCTGCGGGCTTCGTGGAGTGCTGCTCCAACCTGACCTGGTGCACCAACCCTCAGGGCTGTGACCAGATCCTGTGCAAGGAGAACATTGGCAGCATGGGCACCTGCTCCAAATGCTGCTGGTCTTCCTGTTTCAGCTGCAACTTCCCAGAGGCACATTACCCAGCCAGCTGCAGTCACATGTCTCAGTGGATGGATGATGGAGGCTACTATGAGGGAATGAGTATGGAAGCCCAGAGTAAACATCTGGCCAAACTTATATCCAAACGCTGCCCCAGCTGTCAGGCCCAGATTGAGAAGAACGAGGGTTGCCTACAtATGACGTGTGCCAAATGTAATCATGGATTTTGCTGGAGGTGTCTGAAACCATGGAAGCCAACGCATAAAGATTATTACAACTGCTCAGCCATGGTCAGTAAAGCTGCAAGGCAAGAGAAGAAGTTCCAGGACTACAATGAGAGATGCACATTTCATAACCAAGCCAAGGACTTTGCAATCAATCTGGAGAATAAGGTGTTTTCTATTAATGAAGCTTTACAGATGAAGTCTTTGACGTTTGTGATCGACGCCTGCAAGATTCTTGCCCAAGCTCGAAAGGTGCTGGCATACTCGTGTGTTTACAGCTATTACAACCAGGACACCGAGAAGATGGACGTGATGGAGCAACAGACGGAGGCTCTGGACCTTCACACTAACGCCCTGCAGATCCTGCTTGAGGAGACGCTGCTGCAGTGCACTGATCTCGCATCCTGCGTCCGACTCCTAAAACCCGAACACCTAAACACCGGCCTGGAGCTCATTCGCCGAATCCAGGAGCGTCTTGTGGCCATCCTCCAGCACTCCACTCAGGACTTCCGTGTAGGATATCAGTCCAAGACTGGGCCAGACCAGGAGACCGCACAAGCTTCTAATCTAGCTAACCACACAGACACCAACAAAGAgtccAAGTCTGATGGAGGCTCTGACTCTGGAGACTCCGACAACAACAACTGCGCCGGCGAGGACCCCGGCGATGAAGCAGAGGAGGACGACGAGTATGACGACGAATACGTTCCAGAATGGCACGAGGATTACGATGAGGAAGATATAGACGACGACGACTTTTTTTCTGACGACGACGAATCTGAAAACTTAGAGAGGGACTTCAGCCCTTTCGACTAAACGAGCCCGAGAGCGATACACAATGCTTACACGATGCCTACCGATGTGAAAGTAGACACTACAAATTCCACACCCAtataagaacaaaaagaaaaaaagatatggGAATCCAGAATTCGGAGTAAGTTTTTCTGTAACGTGGTTTTTGCTTCGCACTTAGCACCTACTTTGAGCCCTAGCGTAAATTCGTCGTTACACCAAAAGTGGTATTTCacgtttatttagatttatgcTACAGTTTCATTAACTTCCGAAATTGTAAATTTGTTCTTGGCTGATGAAGGTACTTTAAGTTCAATGAAGGATCTTAATTATTCATGTTATATTGtagaagtattatttttttgaaacagtTTTGTTAACAAATTAGAATTATTTGGTCAAAATTTGAAAAAGAAGGGATGCGTAAACAttagaaaagtttttttgttttttttgtttttttttatctggtcGAAGGTGTCGGCATTgtgtatttagtttaaatacCAAAAGCACTTGCctttattccattttaaattcCTTTAAATGCCTTCATATGTATGACGTTAAGTTGGTTGATCGCCATTCGAATGATTGTAagcatttggaaatatttgcaGAGATcttgaaaagagaaaaacatcagcATCCGTGTTTAAGGGCTGCATGAAAAATGACTAGTCCGTGATGAGGATGGTGCTTCAATGACCTGCTGGTTGTGTCAGGCACCGGAATCCTACAAACTCCAACGTTTTACTTTAGCCCGTCTCATTAAGATGCAAtggcaataaatatttaaaagtattgtaGCTCGTCGCATTATTTGCTAAGCAAAACATACCTTAATCGCTTTCAGTTtcttcctcaaaaaaaaaaaagttttaattctttttttggacatttatgTTCACTTGTATAGAGATGGAGATATAAAATATCTTCCGAAGTCCAGTTTTGAATTGAGATAcctatatattcatatactgtccatcttctgaaatgttttctctGTTCAACTTAAAAAGGAAGTTGCTCAACTTCAGctcacaaaataaatgcttttcttcaaA

Function

symbol description
cul9 Predicted to enable several functions, including ATP binding activity; metal ion binding activity; and ubiquitin protein ligase binding activity. Involved in microtubule cytoskeleton organization; protein ubiquitination; and regulation of mitotic nuclear division. Located in cytosol. Part of cullin-RING ubiquitin ligase complex.

NR:

description
PREDICTED: cullin-9 isoform X1

GO: NA

KEGG:

id description
K11970 CUL9, PARC; cullin 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256388.1 True 9023 mRNA 0.52 43 2916892 2951762

Neighbor

gene id symbol gene type direction distance location
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 56225 2852563 ~ 2860667 (+)
ppm1g ppm1g,LOC107660231,LOC107717838,LOC107754752,LOC107702697 coding upstream 70632 2839850 ~ 2846260 (+)
LOC122356205 LOC107719934,LOC107699158,LOC107597732 coding upstream 414571 2500682 ~ 2502321 (+)
polh polh coding upstream 428757 2482202 ~ 2488135 (+)
tmem14a zgc:163080,LOC107751370,LOC107701972,LOC107579763,LOC107597714 coding upstream 438043 2477593 ~ 2478849 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding downstream 5896 2957658 ~ 2971147 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding downstream 19384 2971146 ~ 2979249 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding downstream 70854 3022616 ~ 3050667 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding downstream 258030 3209792 ~ 3227749 (+)
LOC122356787 LOC107739478,LOC107564218 coding downstream 277351 3229113 ~ 3231423 (+)
LOC122356240 NA non-coding upstream 35206 2865807 ~ 2881686 (+)
G90292 NA non-coding upstream 287285 2629192 ~ 2629607 (+)
G90290 NA non-coding upstream 291609 2624938 ~ 2625283 (+)
G90232 NA non-coding upstream 435117 2481369 ~ 2481775 (+)
G90220 NA non-coding upstream 479383 2437106 ~ 2437509 (+)
G90339 NA non-coding downstream 65032 3016794 ~ 3017220 (+)
LOC122356074 NA non-coding downstream 68306 3020068 ~ 3020891 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding downstream 248085 3199847 ~ 3201487 (+)
LOC122356226 NA non-coding downstream 294501 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 363901 3315663 ~ 3315908 (+)
G90230 NA other upstream 446511 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 632085 2264746 ~ 2284807 (+)
cutc cutc other upstream 736063 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 750864 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 919582 1989872 ~ 1997310 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other downstream 30797 2982559 ~ 3010641 (+)
LOC122356070 dnph1 other downstream 100220 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 222973 3174735 ~ 3285406 (+)
G90349 NA other downstream 227665 3179427 ~ 3179933 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other downstream 236064 3187826 ~ 3192113 (+)

Expression


Co-expression Network