LOC122356074


Basic Information

Item Value
gene id LOC122356074
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3020068 ~ 3020891 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252271.1
CCTCTGGAATCTGAGGAACCCATGTCGTTCTCTCCCCTTCCCGGGTCTTTCACTGAGCAAATAAACTTGGATACATTTGAATTCAATTTTGAGACTTTGTAAAGGATCTACGAAGAGTAGGTTTAGGGATGTATATGATACCTCTGAATGTAATGCCAGTGAAAACGTGGACTGAAAAGCATTCATTCTGAAGTGGATGCTGGGGAAGGAATCCCTCtaagaaaatgaaaactttcATCAAGTAACGAACCCTTAGTATGTGTAAAAGTTTTGCTATCTTGTCAAAAGCACCTGGTGTTGAGCTACTTGTTTCCTTATTCTGTTTCCAGCAGAAACCATTCCTTTTTCCCCAAAggtaatgtaaaaacatataatgAATATGATGAGTATCAAACATTTAAGTCTGTAAAACCATTTGCTTTGTTCgttccatttaaataaatgaagatattttaatgcagGAGCCAGAAAGATCCAGGCTCAGAGAAGAGAAATGGTGTGGAGTTCATGCTTCAAGGACATATGCGTTCACAACTGTGGCCAGAAAATGTCAGGCTTGGCCTCCATAGTTTTTATTACACTGTACTCTGTATTGATGACTTTtctttccagtttttttttttaaggaactaATGTAGTTCACATTGCTACCACGCTACTTTAGCATCTGCAGATAGTTGGTGTAATTGCACATGTTCTGTGCTAGCTCAAATAAATCACAGCAACCCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252271.1 True 732 lncRNA 0.38 2 3020068 3020891

Neighbor

gene id symbol gene type direction distance location
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 40819 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 48921 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 68306 2916892 ~ 2951762 (+)
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 159401 2852563 ~ 2860667 (+)
ppm1g ppm1g,LOC107660231,LOC107717838,LOC107754752,LOC107702697 coding upstream 173808 2839850 ~ 2846260 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding downstream 1725 3022616 ~ 3050667 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding downstream 188901 3209792 ~ 3227749 (+)
LOC122356787 LOC107739478,LOC107564218 coding downstream 208222 3229113 ~ 3231423 (+)
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding downstream 214152 3235043 ~ 3246109 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 299538 3320429 ~ 3398358 (+)
G90339 NA non-coding upstream 2848 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 138382 2865807 ~ 2881686 (+)
G90292 NA non-coding upstream 390461 2629192 ~ 2629607 (+)
G90290 NA non-coding upstream 394785 2624938 ~ 2625283 (+)
G90232 NA non-coding upstream 538293 2481369 ~ 2481775 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding downstream 178956 3199847 ~ 3201487 (+)
LOC122356226 NA non-coding downstream 225372 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 294772 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 381073 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 429282 3450173 ~ 3450485 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 9427 2982559 ~ 3010641 (+)
G90230 NA other upstream 549687 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 735261 2264746 ~ 2284807 (+)
cutc cutc other upstream 839239 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 854040 2153422 ~ 2166028 (+)
LOC122356070 dnph1 other downstream 31091 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 153844 3174735 ~ 3285406 (+)
G90349 NA other downstream 158536 3179427 ~ 3179933 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other downstream 166935 3187826 ~ 3192113 (+)
LOC122356782 NA other downstream 186520 3207411 ~ 3209753 (+)

Expression


Co-expression Network