LOC122356274


Basic Information

Item Value
gene id LOC122356274
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11004910 ~ 11022056 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252302.1
AGGTCTAGGCCCATGCCTTTCCAGGATCCATTTCAGCATTAGGCTGTATCACTGAGAGGATAGCTGTGTTCTGACCGTCAGGCAGGTGTCATTACTGCACTTCATTTGCAAGcattcactgcagaggacccaGTGGTCAGAAAGTGATGCAATGCAACATAACTCATTTGCACCTTGATGGCCTAAGGCTTCCAGCATCTGAGCGGTGTGGACCTCCCTGTGTTTCTCCGAGGAGAACGTTCTTCCTGTGCCTTGAGGACGTCCTTGCCTGCTCTGATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252302.1 True 281 lncRNA 0.52 3 11004910 11022056

Neighbor

gene id symbol gene type direction distance location
rps24 rps24,LOC107673958 coding upstream 11598 10990562 ~ 10993312 (+)
qrfpra LOC107668764,LOC107673889,LOC107716286,LOC107564357,LOC107564360,LOC107588699 coding upstream 15176 10986085 ~ 10989734 (+)
pald1b pald1b,LOC107588630,LOC107707320,LOC107668836,LOC107716354,LOC107673876 coding upstream 23126 10969343 ~ 10981784 (+)
spock2 spock2,LOC107668819,LOC107673954 coding upstream 53642 10924934 ~ 10951268 (+)
dnajb12a dnajb12a,LOC107716349,LOC107668821,LOC107707369,LOC107673930,LOC107585300,LOC107588700,LOC108443064 coding upstream 85239 10915644 ~ 10919671 (+)
zmiz1a zmiz1a,LOC107588626,LOC108443181 coding downstream 11891 11033947 ~ 11146626 (+)
ppifa ppifa,LOC107668776,LOC107588732,LOC107564349,LOC107673899,LOC108442288,LOC108263515 coding downstream 127940 11149996 ~ 11152447 (+)
LOC122356105 LOC107588620,LOC107707271 coding downstream 191443 11213499 ~ 11215087 (+)
cxcl18a.1 LOC107707282 coding downstream 193184 11215240 ~ 11217428 (+)
ercc6 ercc6,LOC107588615,LOC107668807,LOC107757150,LOC107708008,LOC107673869 coding downstream 264994 11287050 ~ 11302394 (+)
G92748 NA non-coding upstream 20265 10984238 ~ 10984645 (+)
G92746 NA non-coding upstream 21631 10982940 ~ 10983279 (+)
G92731 NA non-coding upstream 43214 10959420 ~ 10961696 (+)
G92729 LOC107716350,LOC107673932,LOC107707381,LOC107588636,LOC107585302 non-coding upstream 56991 10820942 ~ 10947919 (+)
LOC122357062 NA non-coding upstream 241219 10753233 ~ 10763691 (+)
G92767 NA non-coding downstream 180598 11202654 ~ 11203684 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding downstream 346210 11368266 ~ 11368907 (+)
G92923 NA non-coding downstream 392167 11414223 ~ 11462116 (+)
G92952 NA non-coding downstream 487182 11509238 ~ 11509888 (+)
G92958 NA non-coding downstream 492421 11514477 ~ 11533930 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 35996 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 584484 10416240 ~ 10420426 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 755185 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 1570305 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1840796 9161517 ~ 9164114 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 191470 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 233538 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 367329 11389385 ~ 11413515 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 549604 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 581641 11603697 ~ 11604852 (+)

Expression


Co-expression Network