LOC122356287


Basic Information

Item Value
gene id LOC122356287
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 7017223 ~ 7045575 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252306.1
AGTTTTCAGGATCGCTGCTCCAGTGTTTTGATGTCGcgtgatccttcggaaatccccaatattttttcagtgtattaaaTGTAGTCTTGGTGATGAGCATACAAGACTCCtatcaaaacctttttttgcaaaaagagATATAAAAGAAGAGCTTTTCACTGGACAAATGCAAGACTGCATTTGTTTCAGACATCTTGAACAAGTTGAGGAGAAAAGGTGTGTTCTTACCAGCTGGTGCCTCTGTGAAGATCACAAACCCAGACGTTTTTGTTCAAGTCTTCATTGTGGTTTGATTTTCCAGCTTCAAACTGAATACCATTACGCCTGAGAATGTGGAAAACCCCTTGAAAACATCTAAGCGTTAGAGTACCTGAGTTGGGCCTGTTGGCAACCCTTATGCTTAACAAAAAGAGGATTAGTTGTCCGTACTTTAGTCAGCCATAGAAAGTGAAACCAAATGGAGCCAGAGCTTTGCTTTCTGATACTGGTGCTATAATAGCATCTGTATCATTCTCCCATATTACGTGCAGTTCACTAGACACGCACTTTAGCATTATTGAGCTTTCTGAAAGGGAGAAAAGAAATCAATATTAGCAAATCTGCCTCTCATCTCCACACGCTAATCTCTCAAATCCTTTTTGAAAATGGAAATTATTTGACAGTCACTTTTACACGTTTAAAAGAGAATCGAATGTGTTTAATTGATTGCCCAGCGAGCTTGTTTCGTCATAGGATAGGAGGATGCTAAATCAGATCTTCGCATTGTCTTTGTTTATGTAAGGACTCAGAATCGACAGCTCGCTGTTGTTGGATTTAGCTTATCCTCCGAGGATATCCGTTGTATTCCTTTTTATGTACAGTAAGAAAAGGTTGGCTACGATCTTGCCTATCCCTTAAGAGATACCTGCTATAAAATGCTTGGATAAAGATGACAAACACGTCTAAGATTAAGGCTCCTCATTTGGCAAGAATTAAAAGCGCTTATTAGCATATCTCCTAACTGTCCAGTCGTCCAAAACCAAGCGAATCGGTTCTTGATGAAAACCTTGAAGTTAATAGCCTCCTTGTGTTGAATAAACAGAATTAAGTAGGTCAAAATATGATTATGCGCTGTTAAAGTGCGTTAAGCTCTCTCCTATTTCAACGGCTCTTTGTATAAATTATGCTAATTATGTTAGCTATTCTCAGCTGATTGGCCtccaaatcatttaaaaacgaTCAGCTCTCTGAATTGAATTATGCGTTCAAATTTAGCAAGGATCTTTAGGGTGTGCAATAATGCAGCCTTATTCCAGTTTTTCCATATGATTGGTATTTAATAGTATTCTCTGAAcaattctctctctgtctgatgTCATTGCTCGAGCCTTTGCTAATTAGATCAAGACTTAAAGTAATTAGCTTTCAGAAGTTTTTGCCGGTTTCCTCTGACCACGGTAGCTATTTCAAATGGTCATTttaattctctctttctctccctccttcctctttttccatgttttgcattataaaacagCGGTGGGAAGAATGACAAACACAGTTAATCTCTTGCTCACTGGCAATACATTACAAAAGGCCTAAGATAGGATTCGGCTCCAGCAGAGTAAACACTCACAATTCAGCAATTGTCCATTACGTCTAAATGTGAACGATAACAAGCCTCATTAATTTAACTGTGAGAGTAAGTGGGGTAACACGtatcaaaattaataattggCCTCCAATGTAAATGCAACTGGCATTTTCCAAATTCTGGATGTAGctcacaggttttttttttccttcccaaTCCTAGGGATAGGTTTAGTCATGGATGGctcttttaatttgtttaccaCCTTCTCTCCTTTTCCCCAGAAAACTGATCAAGAAGCCATTTAATTGCTGGAAGAAAAGGAATCACTTCCACCCTTCTCTTGTTTTGTTGCCAAGTCTGCTGCCAGGAACATGAAATATCTCACCACTTGTTTGTTATGGATCAACAAAACGTGATTTATGAGTACATGGCTTTTGCAGGGATTAGATGAGTGTGCTGTTCTAGCTGGAGCTGAACTTCACCCGATGTGCCTGTCTGCCTCTAGTCAACAACACAGCTGTCTGCCTCACCATGCTATCTGATTAAGGTCGAGACAACCTTTATCGGCTGAACGGATCCtcgtgagagagagaagacctTCGCCACAATGCTAACCTTTGGCACCAGGTGCACACAAAGGCCATCAATTTAGCTAAATGTTACCAATAAAAAGAGATGTATCTGCTTATCTCATATTTTACAAAAGAGGACTGCACTGACATTAGCGGCTTAGATAATATTCGATGGATAAATATCATTCTCTTCTACATGCAGGCACGTGTCGCACCAAATGAAGGCTGTATGTAAAATAGTGAAACGGTTTTTATACAAAAGTGTGTAAGTTCTGAACAATCACTAGTAtgtattattaacaacaattgAATTTGATTATgtgatttttatgtaatttcaaTATGCAAACTATAAGCGGTTGATATGCAAATGTTGTTAATTCTCCGATAGAAGGCAGCTTTATCTGTCAGTGgtagacaaaaaataaatcaaatattattttgtatttgatgcACAGACCTGCGGAGTGTGTAGTTGTTTATCAGTTGTGCATTcagtacagtatacagtataaaagtgtgttttcaaTTGTGCGATTTGTGTTTAATTGACATGTGCTGATTACTGTAATTGCATCATGCCTTTGTCTGTGTTTAGGTTTTATGAAGCTGCTGACAGAATTCTTTCCAtatgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252306.1 True 2785 lncRNA 0.38 4 7017223 7045575

Neighbor

gene id symbol gene type direction distance location
LOC122356744 rab11fip2,LOC107733785,LOC107666531,LOC107711431,LOC107585298 coding downstream 7110 6994152 ~ 7010113 (-)
dennd10 fam45a,LOC107711433,LOC107733722,LOC107585262,LOC107602482 coding downstream 145419 6867698 ~ 6871804 (-)
prdx3 prdx3,LOC107733724,LOC107666469 coding downstream 153426 6861288 ~ 6863797 (-)
srbd1 LOC107711437,LOC107666540,LOC107585258,LOC107733719,LOC107698739 coding downstream 176662 6788832 ~ 6840561 (-)
six2a six2a,six2,LOC107666385,LOC107711421,LOC107602488,LOC107602487,LOC107733704 coding downstream 294357 6720061 ~ 6722866 (-)
fam204a fam204a,LOC107733786,LOC107711429,LOC102781047 coding upstream 10674 7056249 ~ 7071527 (-)
LOC122356717 LOC107711426,LOC107666550,LOC107602490,LOC107733707,LOC107585285 coding upstream 52795 7098370 ~ 7105204 (-)
trnag-gcc_67 NA coding upstream 85570 7131145 ~ 7131215 (-)
trnag-gcc_69 NA coding upstream 89497 7135072 ~ 7135142 (-)
apcs LOC107666506,LOC107711423,LOC107706949 coding upstream 254008 7299583 ~ 7300598 (-)
G91574 eif3a,LOC107666466 non-coding downstream 137329 6879222 ~ 6879894 (-)
G91513 NA non-coding downstream 229616 6787267 ~ 6787607 (-)
LOC122357105 NA non-coding downstream 313300 6693662 ~ 6703923 (-)
G91490 NA non-coding downstream 329928 6687077 ~ 6687295 (-)
G91459 ppm1b,LOC107582773,LOC107700122,LOC107749348,LOC107698817,LOC107550052,LOC105904124 non-coding downstream 478855 6536601 ~ 6538368 (-)
G91758 NA non-coding upstream 933245 7978820 ~ 7980706 (-)
G91760 NA non-coding upstream 938371 7983946 ~ 7984316 (-)
G91769 NA non-coding upstream 952105 7997680 ~ 8041218 (-)
G91796 NA non-coding upstream 1085668 8131243 ~ 8131848 (-)
G91889 NA non-coding upstream 1111683 8157258 ~ 8167932 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 517650 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 620797 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 789951 6220175 ~ 6227272 (-)
gng2 gng2,gbg2,LOC107569409 other downstream 944026 6061685 ~ 6073197 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other downstream 1090546 5920502 ~ 5926677 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other upstream 764274 7809849 ~ 7816379 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other upstream 997990 8043565 ~ 8047901 (-)
G92267 NA other upstream 2069518 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 3128838 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 3586675 10632250 ~ 10634566 (-)

Expression


Co-expression Network