LOC122356495


Basic Information

Item Value
gene id LOC122356495
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2303485 ~ 2304076 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252340.1
AGCAGTCCCAGGGCTCTTAAAAGGAAGTAGTAAGGTTGTGTTTGTTCCTTTTACTTCCgtcttttgattttggggaAAGGTGGCGTGGAAGGTAGAGTGGCATGTAGatgttacTTTGGGGATATGAGCGCAGATAATCATTGCCGCCAAATACCGCGGGAGCGTTGCTGAGAACTGAGAATATGATGTACCGACTATTAGTAGGTAGAAGTCTGgtcatattgattttgtttataggtgttttgttttaattaaattatctgcctttttattttagtggtgTGACTGGATTATTGCCTGACTGTGGCCTGACCATCTTGTCGAAATAGTGGATGTGAAAGGGATGCATGGTTACCGTTTACTTTATGGTTAagatattgttttgtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252340.1 True 389 lncRNA 0.40 3 2303485 2304076

Neighbor

gene id symbol gene type direction distance location
LOC122356461 cox15,LOC107753717,LOC107582029,LOC108437854,LOC108260879,LOC102219127 coding upstream 79032 2217871 ~ 2224453 (+)
abcc2 abcc2,LOC107758572,LOC107582114,LOC107654078,LOC107558209 coding upstream 86465 2199984 ~ 2217020 (+)
LOC122356458 NA coding upstream 108298 2186258 ~ 2195187 (+)
LOC122356476 LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369 coding upstream 128052 2166620 ~ 2175433 (+)
wu:fc17b08 LOC107705013,LOC107565911,LOC107699137,LOC107742810,LOC107753730,LOC107753729 coding upstream 209457 2076173 ~ 2094028 (+)
nrxn1b LOC107654084,LOC107582113,LOC107699145,LOC107758571,LOC107558206,LOC107738897 coding downstream 10430 2314506 ~ 2424731 (+)
LOC122356459 LOC107715620,LOC107654086,LOC107727476,LOC107571253 coding downstream 124684 2428760 ~ 2432683 (+)
LOC122356456 LOC107710218 coding downstream 141974 2446050 ~ 2450413 (+)
tmem14a zgc:163080,LOC107751370,LOC107701972,LOC107579763,LOC107597714 coding downstream 173517 2477593 ~ 2478849 (+)
polh polh coding downstream 178126 2482202 ~ 2488135 (+)
G90206 NA non-coding upstream 17241 2285525 ~ 2286244 (+)
LOC122356498 pim3,LOC107732271 non-coding upstream 63438 2238942 ~ 2240047 (+)
G90094 NA non-coding upstream 227657 2075552 ~ 2075828 (+)
G90089 NA non-coding upstream 249639 2053597 ~ 2053846 (+)
G90088 NA non-coding upstream 251180 2052035 ~ 2052305 (+)
LOC122356488 NA non-coding downstream 5805 2309881 ~ 2311135 (+)
G90214 NA non-coding downstream 18533 2322609 ~ 2322964 (+)
G90220 NA non-coding downstream 133030 2437106 ~ 2437509 (+)
G90232 NA non-coding downstream 177293 2481369 ~ 2481775 (+)
G90290 NA non-coding downstream 320862 2624938 ~ 2625283 (+)
LOC122356772 pim3,LOC107732271 other upstream 18678 2264746 ~ 2284807 (+)
cutc cutc other upstream 122656 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 137457 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 306175 1989872 ~ 1997310 (+)
G90010 LOC107676803 other upstream 430894 1872184 ~ 1872591 (+)
G90230 NA other downstream 165869 2469945 ~ 2470381 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other downstream 678483 2982559 ~ 3010641 (+)
LOC122356070 dnph1 other downstream 747906 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 870659 3174735 ~ 3285406 (+)
G90349 NA other downstream 875351 3179427 ~ 3179933 (+)

Expression


Co-expression Network