LOC122356498 (pim3,LOC107732271)


Basic Information

Item Value
gene id LOC122356498
gene name pim3,LOC107732271
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2238942 ~ 2240047 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252343.1
GAGGAAGAGCAAGAAGTGGTGGCGGAGGCTGCGCTCTTTCTTCAGAGCTGCCAAAAAACAGCCTCCAGCTCACAGCTCAGGTCAGggagagcagcagcagcaagaTGAGGGAGAGAAGAGGAAGGTGGCATGGGCAGGAAGAAGTAGTGATGGTACACGGCACAACCATGAGAATGTGTTTTGCTTTAAACAGCTCTACTTTGATCATAGAAAAACAGATATAGAAATGTACATCGGCACACATTACACCAAATCCTATTGAGTTATTCTGTTATTCTGTTTTTAACAGACTACATCTTCAGCCGCTACGCCATTGGTGATCAGCTGGGGAAAGGCGGTTTTGGCGTGGTGTATGAAGGGAGACGTTTGGATGACGATCTTAAAGTGGCTGTGAAATATGTCACAAAGACTCAGCACACGGAGTGTATTATCATCCCCGATCATCCAAACCCTCTTCCGAAAGAGATCGCCCTCACCATCCTGGCCAATAAAGGACACAGAGTGCCGGAGATAATCAGGCTGCTGGACTGGACGGACCACCCTGACCACTTCGTCCTGGTCCTGGAATGTCCCTCTCCCTGCGAGAACCTGGTAGAGTTCATGAGGCGTCATGGTGGAAGAATCGATGAAGAAATGACGCGCCAGATCATGTGGCAGGCGACTTACGCTGCACACAAGTGCTGCCTCCGCAGAGTCTTCCACCGTGACGTCAAACTGGAGAACCTACTGATCAACATCGAGACATCCGAAGTCAAGCTGATTGACTTCGGATGCGGGGACATTCTGGGGACTTCATCTTACAAGTCCTACCACGGTATGTTTCAGATGATTCCCTTCTTCTGATAGATAAAGAACAATCATGCTGCGCTAAAGCAAACTTAAACTCCACTCTGGTCCAGGCACAGCAAAGTACTCCCCTC

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252343.1 True 920 lncRNA 0.49 3 2238942 2240047

Neighbor

gene id symbol gene type direction distance location
LOC122356461 cox15,LOC107753717,LOC107582029,LOC108437854,LOC108260879,LOC102219127 coding upstream 14489 2217871 ~ 2224453 (+)
abcc2 abcc2,LOC107758572,LOC107582114,LOC107654078,LOC107558209 coding upstream 21922 2199984 ~ 2217020 (+)
LOC122356458 NA coding upstream 43755 2186258 ~ 2195187 (+)
LOC122356476 LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369 coding upstream 63509 2166620 ~ 2175433 (+)
wu:fc17b08 LOC107705013,LOC107565911,LOC107699137,LOC107742810,LOC107753730,LOC107753729 coding upstream 144914 2076173 ~ 2094028 (+)
nrxn1b LOC107654084,LOC107582113,LOC107699145,LOC107758571,LOC107558206,LOC107738897 coding downstream 74459 2314506 ~ 2424731 (+)
LOC122356459 LOC107715620,LOC107654086,LOC107727476,LOC107571253 coding downstream 188713 2428760 ~ 2432683 (+)
LOC122356456 LOC107710218 coding downstream 206003 2446050 ~ 2450413 (+)
tmem14a zgc:163080,LOC107751370,LOC107701972,LOC107579763,LOC107597714 coding downstream 237546 2477593 ~ 2478849 (+)
polh polh coding downstream 242155 2482202 ~ 2488135 (+)
G90094 NA non-coding upstream 163114 2075552 ~ 2075828 (+)
G90089 NA non-coding upstream 185096 2053597 ~ 2053846 (+)
G90088 NA non-coding upstream 186637 2052035 ~ 2052305 (+)
G90041 heatr5b non-coding upstream 203105 2035337 ~ 2035837 (+)
G90034 heatr5b non-coding upstream 204375 2017183 ~ 2034567 (+)
G90206 NA non-coding downstream 45478 2285525 ~ 2286244 (+)
LOC122356495 NA non-coding downstream 63438 2303485 ~ 2304076 (+)
LOC122356488 NA non-coding downstream 69834 2309881 ~ 2311135 (+)
G90214 NA non-coding downstream 82562 2322609 ~ 2322964 (+)
G90220 NA non-coding downstream 197059 2437106 ~ 2437509 (+)
cutc cutc other upstream 58113 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 72914 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 241632 1989872 ~ 1997310 (+)
G90010 LOC107676803 other upstream 366351 1872184 ~ 1872591 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other upstream 396834 1840335 ~ 1842108 (+)
LOC122356772 pim3,LOC107732271 other downstream 24699 2264746 ~ 2284807 (+)
G90230 NA other downstream 229898 2469945 ~ 2470381 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other downstream 742512 2982559 ~ 3010641 (+)
LOC122356070 dnph1 other downstream 811935 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 934688 3174735 ~ 3285406 (+)

Expression


Co-expression Network