LOC122356716


Basic Information

Item Value
gene id LOC122356716
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5128512 ~ 5129707 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252371.1
GAACGATTTCGGCGCCTTAACGTTCCATTAACCGTTCTAGGAAAAATTCTAAAAAGCGTGTTAGAGGCGGCATAACCGAGGAAGTGAAGCAAGCAGCCGTAGCTGTTGGCTGGAGATAATAAACAAGCAACAATATGgcacacaaacacagacccGAGACATCCTCCAGAAGAGGTACTGTTGCTTTATTCATCATGTATTTTAGGTGCAAACATACAGCACCATTCAGTTCAGAGACTGCCATGATAAACAGACTCGGTTTCTTGTTAATTTCCAAATTACTGATAATTGACATACAATGTAACTTAGATGACACGACGAAAGCTGATGAAAGCATGATAGTTGTATTTAACCACAAGTCTAAAAACTCCAGTGCTAGAGCTTTTATTTCTACTCTTGATTTTCAGTCATGCTTTTATCGAGTCAAACGCTGTTAACGCTCAAGCAAAAGAATCAAATATTCTCAACCGAGCAAACACATGAGAAGCGGAGAACACAGACAAAcagcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252371.1 True 510 lncRNA 0.40 2 5128512 5129707

Neighbor

gene id symbol gene type direction distance location
alms1 LOC107690154,LOC107733682,LOC107582553 coding downstream 30683 5085837 ~ 5097829 (-)
bbof1 LOC107690193,LOC107582564,LOC107733688 coding downstream 42987 5080448 ~ 5085525 (-)
zgc:123321 LOC107582562,LOC107733692,LOC107690194,LOC107678492,LOC107708471 coding downstream 48686 5076696 ~ 5079826 (-)
pomk pomk,LOC107733691,LOC107582561,LOC107678554,LOC107567859,LOC107708470 coding downstream 54557 5070925 ~ 5073955 (-)
wdr32 wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556 coding downstream 58319 5064298 ~ 5070193 (-)
loxl3b loxl3b,LOC107690148,LOC107708481,LOC107678544,LOC107733697,LOC108263239 coding upstream 6325 5136032 ~ 5152932 (-)
pank2 pank2,LOC107733768,LOC107690147,LOC107708483,LOC107582531,LOC107678547 coding upstream 23611 5153318 ~ 5158423 (-)
mavs NA coding upstream 28890 5158597 ~ 5165274 (-)
LOC122356801 LOC107582566,LOC107690192,LOC107733726,LOC107567849,LOC107708397 coding upstream 38204 5167911 ~ 5169077 (-)
emx1 emx1,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC107718448,LOC108263581,LOC108441775 coding upstream 86286 5215993 ~ 5220510 (-)
G91025 NA non-coding downstream 163553 4964602 ~ 4964959 (-)
G91022 NA non-coding downstream 169101 4958383 ~ 4959411 (-)
G90846 NA non-coding downstream 295368 4829751 ~ 4833144 (-)
G90842 NA non-coding downstream 377544 4750432 ~ 4750968 (-)
G90786 NA non-coding downstream 505708 4549111 ~ 4622804 (-)
G91066 NA non-coding upstream 644 5130351 ~ 5130949 (-)
G91085 NA non-coding upstream 131358 5261065 ~ 5262123 (-)
G91210 fgfr3,LOC107733743,LOC108263592 non-coding upstream 601549 5731256 ~ 5732678 (-)
LOC122356110 NA non-coding upstream 797286 5926993 ~ 5929491 (-)
G91364 NA non-coding upstream 969561 6099268 ~ 6101183 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 348780 4690882 ~ 4779732 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other downstream 439344 4672966 ~ 4689168 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 1073099 4052743 ~ 4055413 (-)
wu:fj16a03 NA other downstream 1172557 3951763 ~ 3955955 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 1692932 3422753 ~ 3435580 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 790795 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 931978 6061685 ~ 6073197 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 1090468 6220175 ~ 6227272 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other upstream 1228494 6358201 ~ 6396426 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 1323824 6453531 ~ 6499573 (-)

Expression


Co-expression Network