XLOC_000667


Basic Information

Item Value
gene id XLOC_000667
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 52363402 ~ 52368198 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003167
AAAGGATCAGTCAAGACTGAAGTTGATCTGCTTTTCAACAGTACAAATGTTGTGCCATCAAATAATGAAATTGGCAATGCAATATTGAACAACGTACAATTTCTAAATGACCTAAACGCAACTGCTAATTCAGTTGACATTAATGGAACACAAATATCATCGATTACTGAACCAACAACGGAATACTCAACACCCACAACAACATCTGCTCAAACATTCACCCCTACTGCAGCAGAAACATCTACAACAACAGAGTCCTCCACAGCAGAGGCCTCCACAACAACTCCTGTGGAAACGTCTACTACTACCATAGCAGTAACATCTACTACAGCAACAGAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003167 True 341 lncRNA 0.40 2 52363402 52368198

Neighbor

gene id symbol gene type direction distance location
XLOC_000666 LO017718.1 coding upstream 295 52353162 ~ 52363107 (+)
XLOC_000665 NA coding upstream 16503 52345955 ~ 52346899 (+)
XLOC_000664 best2 coding upstream 193267 52162642 ~ 52170135 (+)
XLOC_000663 get3 coding upstream 210409 52137528 ~ 52152993 (+)
XLOC_000662 rnf11a coding upstream 226089 52130164 ~ 52137313 (+)
XLOC_000669 si:ch211-217k17.8 coding downstream 24313 52392511 ~ 52396264 (+)
XLOC_000670 si:ch211-217k17.9 coding downstream 30007 52398205 ~ 52400660 (+)
XLOC_000671 glb1 coding downstream 93870 52462068 ~ 52478746 (+)
XLOC_000672 cldnd1b coding downstream 113134 52481332 ~ 52486995 (+)
XLOC_000673 BX323839.1 coding downstream 126845 52495043 ~ 52510756 (+)
XLOC_000660 NA non-coding upstream 498637 51850561 ~ 51864765 (+)
XLOC_000658 NA non-coding upstream 537382 51752978 ~ 51826020 (+)
XLOC_000656 NA non-coding upstream 646187 51694751 ~ 51717215 (+)
XLOC_000681 NA non-coding downstream 439434 52807632 ~ 52807843 (+)
XLOC_000684 NA non-coding downstream 898202 53266400 ~ 53278288 (+)
XLOC_000686 NA non-coding downstream 951961 53320159 ~ 53320674 (+)
XLOC_000687 NA non-coding downstream 952733 53320931 ~ 53321338 (+)

Expression


Co-expression Network