XLOC_006673 (C13H10orf53)


Basic Information

Item Value
gene id XLOC_006673
gene name C13H10orf53
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 29404218 ~ 29406534 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012872
AGAGTGGTGTACACAAAAATGCAGTGTTGACAGCCTTGTATTGTGACATTCGGAGGGATTTGTAATAgtctgttatttataattatgcCAACTAATTCAATAGTAACAATAAGGTACGGTCCATACGATTCGTGTGGAATTGTCGATCACAGAACGTTTCGCCTGGACGGCTTACAAGCGGTGCTCAAAGGCGACGGTCACCGGTATGTCCTCGAGAAAACAGATGACTGGAATACAGTTGAGCTCATTGTGAATGGAGAGCGCGTGTATACATGCAACATCACTGACCTTGTATTTGGGGGTGATGGACGCCTTGATCCGCTGTGCCAGGAGGCCATTGACGCGGTGAGGGAGGCGTACTGAACACCGTACCCGTTTCAAATTAAAGTTAGCAATAGCATAGACTTCTATTGCCGAATACTGAACGGTATACACTGTATACCATAAAGGACCGTTTTGGAGGAATAAAAAGCAACTGTAATTATGAGTTTCATTCTCACACAATTTGTGATTCAgagtttatatcttgcaattcggataaattagtcataaattattttattgtagaataagttttagtattttatttctcAAGAGATCTGAAATTTTATATCATGCAGTTTTGATCTCATACTGTAAACTAATTTTTTTATGATTCTGTGAAAAAAAAGTCACAGAGAAAGCAATTCAGATTGTATTTCTCACAATTCAAATTTTATTTCACGCcgttctgagaaaaaaaaaattcttattatatttatcacaTTTGCGAAAAAGTCAGAGCTGTATCAAAAAATCTGATGAATTCAGTTATACTGTATACTGATATATCACTTATACGGTAATTCACAATGCTGTGAAAAGATGTTAACCTTATAATTtaggtaaaaaagaaaaatatgaataAGTTACAATTTCGCAATTGCGACAAAAAAGTTTTTGCCCTTGAATGCAAATGAGCTTGTTCTCTCCACCCTCTGTTCGGGCATATCTACTTCAAAAGATAAGGGATACTTGGCATCACACAAAAACATTACGCATTATACTGTACAATTACATTATGCTGTTTGCCAATACTGACACATAGTAATAGGCACTTGTCAATCAATATCGGGGTGTTGATAACAATGTCACGGTGCAGTTGGCCTCAAAATTGCTGGCATTTGGAAAAAGACTTGATGTGTTTATGCCACTCTAGTATGGCTGTGTACAATATGTACTATTCCTACACATTTCTGTTCAAACTGCTTCCCTTTAAACTGTGCCCTCTAGTTGTAAGGTACTATTTCAACCATGTTTAAAATTAAAGTGAGCCAAATAACTAGACAGCATTTTAAAGCATCCATGAAATGAGTACTATCGTAGGGTCCTATGTACATATGAAGGCAGCACACTGTCTGTGAGAAGACTGCTTGTATATGTGCACAGGTATATGACAAATGATATAACCACGCAAACATCCATCGTTTGTCAGTGACACAGTTTATTGCATTATTGCTGAAAAACATCTATCGTTCATCACAATCTATCACAGCGATCTTTTTCTCCCATGAGCAATGTCCTGTTTATAATATACTAAAACCaaatctatttttttacattaaattccCTATTCCAAGTGTCACATGAATAACCTACCACACAGTATGTGTAAAGTACAGTTTACCGCTATTTAGTTCAGCTAGTGTGAATATCAAGGTTTCACTATGTGTGAGCATCCAGCCACAGAGTGATATAATATAGCATTACCAAATGTTGCTAAATTTCTATAGAAAAGCAGTTTGACTGCATTAAGATTAAACAGAACGATATTGCTTCAGATGTTTGTGCTTATCAGATGGGTTGTGTAATTAATTGCTTTGTAGCTTACGTTTAATTGTTTCCCAGTGTGTATACTAGCATTTCAAAGTTGTCACAGACATGTTGACGTTATGAATGTCCTCGTTCCCACAAGTCTTAAATGTCACTAAAACCCTAAAGTCTAAAATAAAGCATATTTTGTGGAAGCTACAGAGAATATCAGGACTACCACGGAGAATAACGTTACTTGTCTAGATGCCATCTGTCTGATGTCTCAGGATGAAGCCAAGTGTGACAGTTATGGAagacaatttgtaaaaaaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000069363

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012872 True 2126 mRNA 0.36 3 29404218 29406534

Neighbor

gene id symbol gene type direction distance location
XLOC_006672 NA coding downstream 174283 29224992 ~ 29229935 (-)
XLOC_006671 NA coding downstream 554324 28827293 ~ 28849894 (-)
XLOC_006670 NA coding downstream 657641 28743798 ~ 28746577 (-)
XLOC_006668 NA coding downstream 684988 28677121 ~ 28719230 (-)
XLOC_006669 pcgf6 coding downstream 714501 28682614 ~ 28689717 (-)
XLOC_006674 chata coding upstream 280 29406814 ~ 29421331 (-)
XLOC_006675 slc18a3a coding upstream 15515 29422049 ~ 29424454 (-)
XLOC_006676 rgra coding upstream 39692 29446226 ~ 29455859 (-)
XLOC_006677 cdhr1a coding upstream 73476 29480010 ~ 29505946 (-)
XLOC_006678 NA coding upstream 100079 29506613 ~ 29701941 (-)
XLOC_006471 BX537274.2 misc downstream 19139313 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 28577993 825904 ~ 826225 (-)
XLOC_006665 NA non-coding downstream 831754 28546412 ~ 28572464 (-)
XLOC_006679 NA non-coding upstream 302811 29709345 ~ 29803009 (-)
XLOC_006680 NA non-coding upstream 530861 29937395 ~ 29942962 (-)
XLOC_006682 NA non-coding upstream 578343 29984877 ~ 29985502 (-)
XLOC_006689 NA non-coding upstream 839139 30245673 ~ 30250564 (-)

Expression


Co-expression Network