G6202


Basic Information

Item Value
gene id G6202
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 9333600 ~ 9334385 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU6879
ATTCATTCAGTGCCTTATGCTGGGTTCAGACTACACGATATTTTTGACGGTCACGATAGTCACTGTGTCAGATTATACAGTTTTTTGACTCCTAAAATCTTGCGGTGTCACGGACAAGAAACATGTCAGACTACACGTTGCTACCCGACCATTCATCGTGTGCCGTCTTTAACCGCGTGCGTGCTGTCATCGAGAAGGCGGGACTGACAGAAAGTACCGTGAACATAAACAAACAATGCAGCGTGTTTTGTCGTCAGAAAGCTCAAAAGTGGACACTGGATTGCATGGATATTTGGATTTCCTTTAAAAAGAACTGAGGTAACATATGTTTTATTTACCTTTTTTCACTCTGTCACGGTAACATAGTCCCTCGAGGAAACATCACAAATGCAGGAGTATTGTTGTCATAGCTCCACAAACATTCCTCCATTGTAAATTCCACCTAGCAGGAACGATGCCATTGTCTCTCTTTCAATTTGAAAGCATGTAGGAAGGCGCTTCTGTGCTTCTATTGGCCAGTGTCACACATGTGACGGAACTTGTCGTGGATGACGGAGAGAAAAATTAAACATGCTAGGCTGTGTCCGAAATCGCCCCCTATACCCTTAAATAGGGCACTATTTGAGGGGACAGCCATTTGTAGTGGTGTCCGAAACCGTAGTGGAAGATGTTGAGTGCACTCATTCAATCCCACAATGCACCGTAATAACGAGTGTACAACCGATGCACGCTCAACGGCTAGAGAATACCCATAATGCACTGTGAGAGTCGCACGCTGAATGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6879 True 786 lncRNA 0.31 1 9333600 9334385

Neighbor

gene id symbol gene type direction distance location
CI01000000_09059743_09060201 NA coding downstream 273399 9059642 ~ 9060201 (-)
CI01000000_09046286_09058330 FBXO38 coding downstream 275270 9045128 ~ 9058330 (-)
CI01000000_08992501_08994328 NA coding downstream 338839 8991233 ~ 8994761 (-)
CI01000000_08975466_08977875 HNRNPA0, ROA0, HNRNPA0B coding downstream 355725 8975404 ~ 8977875 (-)
CI01000000_08973303_08974193 HNRNPA0, HNRNPA0L, ROA0, HNRNPA0B coding downstream 359407 8972450 ~ 8974193 (-)
CI01000000_09421380_09425048 NA coding upstream 86892 9421277 ~ 9425048 (-)
CI01000000_09451613_09452011 NA coding upstream 116227 9450612 ~ 9452186 (-)
CI01000000_09469075_09494668 NA coding upstream 134635 9469020 ~ 9495980 (-)
CI01000000_09506970_09508416 NA coding upstream 171907 9506292 ~ 9509326 (-)
CI01000000_09530735_09630567 PCDH1B coding upstream 196350 9530735 ~ 9630567 (-)
G6096 NA non-coding downstream 141483 9169999 ~ 9192117 (-)
G6049 NA non-coding downstream 228175 9105191 ~ 9105425 (-)
G6037 NA non-coding downstream 239212 9094163 ~ 9094388 (-)
G6016 NA non-coding downstream 263573 9069824 ~ 9070027 (-)
G6015 NA non-coding downstream 264553 9068818 ~ 9069047 (-)
G6229 NA non-coding upstream 32963 9367348 ~ 9367573 (-)
G6515 NA non-coding upstream 118677 9453062 ~ 9453348 (-)
G6516 NA non-coding upstream 119699 9454084 ~ 9454294 (-)
G6463 NA non-coding upstream 185537 9519922 ~ 9529350 (-)
G3931 NA other downstream 2930075 6157013 ~ 6403525 (-)
G3716 NA other downstream 3332831 6000407 ~ 6000769 (-)
G3650 NA other downstream 3792719 5540463 ~ 5540881 (-)
CI01000000_05465020_05466303 NA other downstream 3867084 5464058 ~ 5466516 (-)
G2730 NA other downstream 4943448 4386383 ~ 4390152 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other upstream 1069943 10407395 ~ 10409950 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other upstream 1490026 10824324 ~ 10825464 (-)
G8125 NA other upstream 1705884 11040269 ~ 11040909 (-)
G8699 NA other upstream 3950939 13272585 ~ 13311429 (-)
G9036 NA other upstream 4392415 13726800 ~ 13727090 (-)

Expression


Co-expression Network