XLOC_006682


Basic Information

Item Value
gene id XLOC_006682
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 29984877 ~ 29985502 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013487
ttaaaaatgaataaaaaggttGAAATAAGAACATCTTGGATGACCTGGGGGAGACAAAATAATCAGAACATGTTGGaCAGGGTCATGACTGGAAGGTTATCCCTGCCATGGATGATTTGCAGTGAGGCATGAGTTTTGGGTGACTGAGAGTGAGGCGACACACTGGAAGAAAACAAGATTTGACTTTGTCATGTTTAGCATGTCCCAATGTTAGCTTGATGTTTGAAAGGGATTCTTtatgtcttaaagggacagttcactgaAGAAAATACTTCtattgtcatttactcatcctgctTAAGATTCTTTCTTCCGTTAggcataaaagaagatattttaaagaatgttgaaaaccttaAGCCAttgacattaattatttttttctactgtggaACTCACTAGTTTCTGATTGCCAACGTTCTCCAATATATCTAACTTTGtggtcaaaagaaaaaaaagatactcATAAagttttgaaaccacttgagggagagtaaatagtga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013487 True 504 lncRNA 0.36 2 29984877 29985502

Neighbor

gene id symbol gene type direction distance location
XLOC_006681 hif1an coding downstream 4662 29952633 ~ 29980215 (-)
XLOC_006680 NA coding downstream 41915 29937395 ~ 29942962 (-)
XLOC_006679 NA coding downstream 181868 29709345 ~ 29803009 (-)
XLOC_006678 NA coding downstream 282936 29506613 ~ 29701941 (-)
XLOC_006677 cdhr1a coding downstream 478931 29480010 ~ 29505946 (-)
XLOC_006683 wnt8b coding upstream 5588 29991090 ~ 30006260 (-)
XLOC_006684 scdb coding upstream 22052 30007554 ~ 30028103 (-)
XLOC_006685 trmt2b coding upstream 47534 30033036 ~ 30034754 (-)
XLOC_006686 tysnd1 coding upstream 150173 30135675 ~ 30143127 (-)
XLOC_006687 sar1ab coding upstream 159435 30144937 ~ 30150592 (-)
XLOC_006471 BX537274.2 misc downstream 19719972 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 29158652 825904 ~ 826225 (-)
XLOC_006672 NA non-coding downstream 754942 29224992 ~ 29229935 (-)
XLOC_006671 NA non-coding downstream 1134983 28827293 ~ 28849894 (-)
XLOC_006689 NA non-coding upstream 260171 30245673 ~ 30250564 (-)
XLOC_006690 NA non-coding upstream 563907 30549409 ~ 30551509 (-)
XLOC_006691 NA non-coding upstream 583065 30568567 ~ 30571143 (-)
XLOC_006693 CT025887.1 non-coding upstream 646603 30632105 ~ 30632219 (-)
XLOC_006698 NA non-coding upstream 823461 30808963 ~ 30812183 (-)

Expression


Co-expression Network