Gene
RNA
| Item | Value |
|---|---|
| gene id | G7968 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 10585597 ~ 10589211 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU8789 | True | 3594 | lncRNA | 0.38 | 2 | 10585597 | 10589211 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_10544400_10562125 | GPC4 | coding | downstream | 22519 | 10544322 ~ 10563078 (-) |
| CI01000000_10533216_10540624 | HS6ST2 | coding | downstream | 44629 | 10533134 ~ 10540968 (-) |
| CI01000000_10504203_10520863 | MBNL3 | coding | downstream | 64734 | 10504203 ~ 10520863 (-) |
| CI01000000_10481263_10483211 | RAP2A.S, RAP2C, RAP2A, RAP2AB | coding | downstream | 102003 | 10481089 ~ 10483594 (-) |
| CI01000000_10474520_10476010 | NA | coding | downstream | 109587 | 10474411 ~ 10476010 (-) |
| CI01000000_10590812_10591914 | NA | coding | upstream | 836 | 10590047 ~ 10592285 (-) |
| CI01000000_10612377_10662964 | GPC3 | coding | upstream | 23166 | 10612377 ~ 10662964 (-) |
| CI01000000_10722125_10723905 | NA | coding | upstream | 132845 | 10722056 ~ 10724052 (-) |
| CI01000000_10734747_10737823 | NA | coding | upstream | 145339 | 10734550 ~ 10737823 (-) |
| CI01000000_10745761_10748814 | CAB39L1 | coding | upstream | 156324 | 10745535 ~ 10751206 (-) |
| G8028 | NA | non-coding | downstream | 151311 | 10434021 ~ 10434286 (-) |
| G7946 | NA | non-coding | downstream | 214450 | 10369020 ~ 10371147 (-) |
| G8016 | NA | non-coding | downstream | 240101 | 10344942 ~ 10345496 (-) |
| G7924 | NA | non-coding | downstream | 363323 | 10221012 ~ 10222274 (-) |
| G7884 | NA | non-coding | downstream | 436517 | 10147499 ~ 10149080 (-) |
| G7991 | NA | non-coding | upstream | 115688 | 10704899 ~ 10719278 (-) |
| G7985 | NA | non-coding | upstream | 183216 | 10772427 ~ 10774179 (-) |
| G7996 | NA | non-coding | upstream | 206149 | 10795360 ~ 10796229 (-) |
| G8080 | NA | non-coding | upstream | 326799 | 10916010 ~ 10916315 (-) |
| G8081 | NA | non-coding | upstream | 327774 | 10916985 ~ 10917184 (-) |
| CI01000000_10407402_10409508 | UBL3B, UBL3.S, UBL3 | other | downstream | 171084 | 10407395 ~ 10409950 (-) |
| G3931 | NA | other | downstream | 4182072 | 6157013 ~ 6403525 (-) |
| G3716 | NA | other | downstream | 4584828 | 6000407 ~ 6000769 (-) |
| G3650 | NA | other | downstream | 5044716 | 5540463 ~ 5540881 (-) |
| CI01000000_05465020_05466303 | NA | other | downstream | 5119081 | 5464058 ~ 5466516 (-) |
| CI01000000_10824957_10825464 | MMGT1, TMM32 | other | upstream | 235200 | 10824324 ~ 10825464 (-) |
| G8125 | NA | other | upstream | 451058 | 11040269 ~ 11040909 (-) |
| G8699 | NA | other | upstream | 2696113 | 13272585 ~ 13311429 (-) |
| G9036 | NA | other | upstream | 3137589 | 13726800 ~ 13727090 (-) |
| G9602 | NA | other | upstream | 3751791 | 14341002 ~ 14346534 (-) |
