LOC122358919 (armc9,LOC107668662,LOC107668488,LOC107720734)


Basic Information

Item Value
gene id LOC122358919
gene name armc9,LOC107668662,LOC107668488,LOC107720734
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9252508 ~ 9280469 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU154960
CCTTCACTGTGACACGTGAGTGTTAATGATGTCAGCCgtgtgtgaggggtgtgtgACGTCTTTTGGTCTTTCTCCAATCAGTAACCGATTCGGAATGCTGGCGTTCCTCTGTGGAATCGGGGCTCACAGGCTCCCCAGAAAGACGCGTACCTCCACCAGGCCCAAACAACACCAACGGTCACTCGTACAGTGGCCAGAACGTGGGCTTTGCAAGCCGGCCTAAGATTCCTCGCACCCCTGACAGTGACGCAGGCAGTGCTGGCAGGTCTCGTCTGCCCCCGCTGGCCCCCCAGTTCTCCAACAGCGAGCCCCAGCAGAGCGGAAGCAGACCCGGCTCGTCGGGGGGCTCCGGCGGGCGGCCCAGCCAACAGAGCAGCCAATCGCatagaaagtgaaaaaaaaagaagctttcaGCAAGAGAAGCCTATCGCCAGAGGAGTATCCAACTTCCTGTAACAGCATCCAAGTTTCTTATCGCGGTCAAGCCAACGGAGACGGTCGTGGGCCTGCGGAACAAAGCTGAGGATTGTGGTTTCGGAGGGCCTTTCAGCCCCTGCCACAGAGCTCCTCTGTAACACAACACACTTGGGCAATAATAACAACAAGTACTTTCATTATCCCACAACCTTCCAAACGCCTGGCGCTCCGCTCCTGCTTTGTTACTCTTGAACCTCGACCACCCTCGCTGAGAGGAAGCGGATAGATGTAAAAACATTGAGCGAAAACACCGTCTGAATTTCCGTCGTTTGACGCCGTTTTATTGTTGCAGTTGCTTTTGTCTACGTTTTAGTTGCAAAACGTCATATAGCGCTGTTTTTGCATGAGTGTGCTGTGTGAAATAAATCTGGTAGACAAAAcgaatacagtaaaaatttagCTAATCGATTGATGTTTGGGCCTGTTGTTTGGG
>XM_043258901.1
TTCCTCATGGTTACCGTCGCAGTTAGCCAAACAGCTTCTGTTTGTCCAGCTGAAATCGTCTTCAATAGCTTATATATCTCCACGGatttaacataaaacacatcagATATGTTCAGCGACGGTTGTACATGAAATATAGTTGGTGAGATTGTAGATCAATGAGCTCCAGAAAACCTGAAAAGATGGGTGAGGATCTGGCAAGCGAAAGTGATCTGCTATCAATGATCAACGAGTATCTGAAGTTTGCTGAGTTTGAAGAGACCGCGAAAGTGTTTGAAAAGGAAGTCAGACGCAAAGGAAAACCCGTCCTCAAAAGTGCAGGACACTCACGGAGAGACTCCAAAATCATCGGCATTCACGAGGATTTTCTCAGCTCTTTTACCGATGGCGACTATAAGGTGTTCTCTGAGCTGTGGGCTAAAAGCGTTCCTCCGGAGATTCGGGATTTCGATCCAGCAGCTCAGAAACTGGAGTTCTACTTACAaattcattttacaatatacCCGCTGAAATCACCCGTAGGAAGTCACGATAAAGGAGAGTTTGAGAAGAGGATCGCGCATTTCAAACACTACCTGGAGACCAGAGGGGCCGCGCTGAGCCAGACCACCGAGTTCCTGCCCTTCTACGCCCTGCCGTTCGTGCCCAACCCCGCGGTCCATCCGTCCTTCCAAGAGCTCTTCCGGGATTCCTGGATGCCGGAGTTGAAGGAAAGGCTGGAGAAGTTTCTCTCGGTCACTCTGAAAGCTTCGAACGCGCCGAGGCTTCTGACTTTATATACCGAAGGTGGAAAAGGCGCCAAAGAAGCGATTCAACAAATGCAGCTCCATCTGACCGAGGCGGAGAGGAAGTCGTCGGTCTGCATGCGGAGATTGGCTAAGCTGCAGGCCGACCATCACAACCTCATCGGCATCACGGCCGAGCTGGTGGATTCGCTGGAGACCACCGTCCGTGGAAAGATGATCTCCCCGGAGTACCTGCAAGGCGTGTGCATGCGGCTCTTCAGCGGTCACCTGAGACAGAGCGCGGCTCAGAGCGTAGACTTCACCCGACCCGGCACTGGATATTACTCTATGAGTCCTTATGATGATGGATATGCATCCTCAATGCTGCGGGCATCAGTCGCACCTCAGAGGCCCAAAGATGTGCCATTGCTGCCTTCGCTTGACTACGAGAAGCTGAAAAAAGACCTAGTTAATGGATCAGATCGACTGAAGGCTCTGGTGCTCCAAGCTTTGCGCTGGAGGTTAACCAGATCTCTACACGGTGAGCAAAGGGACACGGTTTTACAAGCCTTCATCAGCAATGATCTTCTGGAGCGCTACAGTTCCAAACAGAAAACTGTTCTCTGTCTGATGAAATCCAAAAATGAGATTGTCAGACAGTACATGGCACGACTCATCAATGCCTTTGCCTCTTTATGTGATGGACGCATGTACCTTTCTCAGATACCCTCATTACTGAGGTTTCTGCTTGATTCTCTGAAGACCGAAGAGAAAGAGTCTGTAACACGAGAAAACGTACTTGCAGCTCTGCAGAAACTCAGCCTAAGGCGAGCACAGCAGTCTGCTATGATCAGAGACGGTCTGATTGGCTGGTTGGTCAAAGAGCTCCATGACTCCGACTGCCTGTCCGACTACACGCTCGAATACGCCATCTCCCTCCTCATGAACCTCTGCCTGCGCACTCAAGGAAAGAAGACATGCGCAGAGGAGGCTAAGCATGTCCTGAAAGTCTTGACGGAGCTCCTGGGACATGAGAACCATGAGATTCGGTACTATGTGAATGGAGCATTATACAGCATCCTGTCAGTGCCAGAGATACGAGAGGAAGCCAGACAGATGagTATGGAGGAGATCTTACGCTGTTACAGTAAAGAAGAAAATCCTGAACTCAACAGGCAGATTGAATTCATCATCAAACAGCTTAATTCAGCGGACATCCCTGAACACGAACCAGAGTCggatgatgaagaggatgatgacgacgacgatGACGAGGAAGATGTCATGGAAGCAGACCTAGATAAAGAGGAAGTTCTGCAACCTCAGCCGAAAGAGCTCAGTGGAGAATCTCTGCTGACAACAGAGTATCTCGGGATAATGACCAACATGGTGAAGATGAAGAGAAGATCGTACGCTCCATCATCTCGCAGCATAGACGAGCCCCTCCAGCGCCCCGTTACACCCAGTTCCCACAAGAACACCATAGCTGGTGGTGATGGAGTCTACGCTGTTAACCGACAGAGAAGTGATGATAGCCCCACCCATTCTCGCTTTAGTTCCCGCCCACCTACTTTTGGCAGCCGCCCGAGCACTGCGGAATCCATCCACCAAACATTAGTAACCGATTCGGAATGCTGGCGTTCCTCTGTGGAATCGGGGCTCACAGGCTCCCCAGAAAGACGCGTACCTCCACCAGGCCCAAACAACACCAACGGTCACTCGTACAGTGGCCAGAACGTGGGCTTTGCAAGCCGGCCTAAGATTCCTCGCACCCCTGACAGTGACGCAGGCAGTGCTGGCAGGTCTCGTCTGCCCCCGCTGGCCCCCCAGTTCTCCAACAGCGAGCCCCAGCAGAGCGGAAGCAGACCCGGCTCGTCGGGGGGCTCCGGCGGGCGGCCCAGCCAACAGAATGGCAAGCAGTATGAAGAACAGCTGCAGGACAGCTGAGTGTGGCGTGACGTCAAATCATAGTGTGTCTTGGAGATtccaacatttcatttcaattggCTGATGTACTTGCATTATTTGGGCTATAATAAGTTATTAATGATCGTTTAATTCTAATCGGATTTGGGTTCGTAACATAATTTCAATTTAGCAAACGTTTCATCCAATGTGACTTGCAAATGAGGAACATAAATGTGTTCTCCTCTGGATGTAGAGTAGATATTCCCGAAAATCTAGCTTGTACTAATTCTCATTGGTCTTCTGGGTGGTTACTAGGGAAGGTGTTTCTATTGtcggttgctaggtggttgttaCGTAATGATCATTAGGATGTTTTGGGCAGTTGCTCGAGTGTTTTGGCTTCATCTTGGTTGTTGCTGTGGTGTTGTAGGTGGTCTGCTGCATTgattgggtggttgctatgttGTTCTGGATTGTTATAATGTTTCGggttgttgctagggtgtttttagATCGGTTGCTAATCCGTTCGGGGCGATTGAAAGGGTATTTTGGATGGCTGGAGGggtatttagtttatttttttcctggtTGTTGCTAATGcattctgggtggttgttagggtgtccTGGGAGATAGTTTTGAGTGGTTACTGGGTTTGTTGCTAGGGTTTTCTGGGTGGTTAAGAAGTGCTGCCGATTGATGTGGCGTTCTGGGTTGTTGCTACAGTGTTTCAGGTGGTTGCTATGGTCTTCTGGATTAATGCTGGGTTTGGAGTGCTTTCTATGGTGTTCTGGATTCATTTTAAGGTGTTAGGCGTTCAAGGTGTTCATTCAGGGTGATTGTTAAGGCGTTCTGGAGTACATGGAGTGCGTTTAGTTTGTCGGTAATGTGTTCTGGATAGATATGGTGGTCTGATTCTCATTACGTTGTTGCTGCAGAGTTTTCAGGTGGTAGGTAGTGAGTGATTGGTTGAAGTTTTGAGTTAGTTTCTAGGTGGCTGATTGGACATTCCCAGTGATTGATATGGTGTTGGTGTAGGGTAATGTAAGGTGTAAAGTGGTTGGTAACTTAGAGCATTCTTAATGCTTACCTGGGTGTCTTGGGTTATAGTGTTTGGTTGGGTTTTCAAGGTAATTCTGGCTTGTTGCTAAGTTACTCAGAGTGGTTGCTAGAATGTTACAGCTGGTTGCCATTGCATGGCTGTTTGGTCGCTaagattaaaacattaatttcagcTTGACATTTACAATGTCAACATTTACTGTATTCAATGACAGTCGATATTACAATCTGACAAAATAAAGGCAGAGTGTACATTCAtccactgatttattttatcacatttcCTGATTATgttctttgtttgtcttcattCTGCGCACTCTCttcattcacattcacatttcTTTCTCAAGGTCTctgataatgattttttttttttatcagtctgtctgtctgtctttctgccCTTTCGGTCTCATAAATCAGATGGAATAAGTCTTGCCTGTGTTGCATTTAGTGTTACTTCTTCCTGCTGAACTTTACAGATGCATTACTGGAAAATCAATTTTCCTCTCTAATGCACATGGGCAAGGCTCCATATTATGTTTACTTCCTGTTAAGTGCTCCATCTTTTCTAGCTCACTAATCGTTACAAACAGGAAAGTGTGTCTGTTCAGACCACAATCTAATCAGTCAAGACCACTGAAAAATAGGTTATTTTAGCTCAGAATACGTCATTATTCAACGTGAGATCATTGATATCGccaaatatgtgaaaaatagGCATGGATTATATCTCgacttaaaataaatagcatgaaATGATCAAAAGTTAAGTGcaataaattgcatatattaatatgaataaaaaaagacatcatattagtgctgtaaaaccattaatcatgattaaagacatcaaaaataagtttgtgtttatataatgtcaactgtgtatatttgtgtatatgtacataatgtaaacaaactttatacatttaaatagcatttttgatAAGTCTGATGTCAAAAATGCGTGTTTGTTTACATGAAtcatgcaaattatattttcaaaaacaaaaaaaaatagtttgcatCCCATGCCTCATTATCTTCCTCTTTTTCAGTTTAAACTGGAATTCACAATCTGCTTTTGTGAGCGGGAAACCACGCCTACTCGGATTTAATTGGCCATCTCAATCATTTTGACATGCTGTCAGACCCCTGAGGCAGATCGGCTTAAAATGTCAACTAGTATACAACAAACAGAGCGCTGCGTAACGTACAGTAGTTCAGAAATGTCAAATATTGTGGCTACGGCGCTTACAGCACATAGTAGCACTTTTTCGGTTAAAATCGTCTAGctgtgaaattatttaaaatgttgtttgttattTCTGATTAGCGACGGATATCGTCTAAGTTCAAGCGCGActgccgctttaaattctcaagcGCGCGATAGCaggattgattctgattggctgtcaatatCTATCGTTCATCTGCTGAAAAAAACGTTTTGAAAATGGTTCCAACAATATCGTTTCTCTCTGCCTTTATCGTTATTGTTGGAATGATTTTTAGAGCTGTATCTTTATCGTTATGTCAAGGgggctttatttttaatcatttattttagacGCAACTCAATTCTCCCCTACGCCCTACTTAGGGATAAATGGGTTAACCACTAATTAGAGTGACTCGACCAGTTCTAAATATGCTGAGCATGTTTATAATATCCCGTACCTTCTT

Function

symbol description
armc9 Acts upstream of or within cilium assembly. Predicted to be located in cilium. Predicted to be active in centriole; ciliary basal body; and ciliary tip. Is expressed in central nervous system and retina.

NR:

description
PREDICTED: lisH domain-containing protein ARMC9

GO: NA

KEGG:

id description
K22864 ARMC9; LisH domain-containing protein ARMC9

RNA

RNA id representative length rna type GC content exon number start site end site
TU154960 False 910 lncRNA 0.52 3 9273559 9280469
XM_043258901.1 True 5396 mRNA 0.45 28 9252508 9279919

Neighbor

gene id symbol gene type direction distance location
sars2 sars2,LOC107672413,LOC107758861,LOC107395008 coding upstream 249246 8995892 ~ 9003262 (+)
fbxo46 si:dkey-114g7.4,LOC107672409,LOC107758538,LOC107561382,LOC107749655,LOC107678246,LOC107560627 coding upstream 271616 8975037 ~ 8980892 (+)
si:ch211-11n16.2 si:ch211-11n16.2,LOC107561380,LOC107678255,LOC107749652,LOC107672363,LOC108278225,LOC108442869,LOC105909327 coding upstream 334821 8908510 ~ 8917687 (+)
LOC122359549 zgc:162193,LOC107672386,LOC107749645,LOC107758488,LOC107678257,LOC107560630,LOC107561378 coding upstream 412592 8830993 ~ 8839916 (+)
LOC122359480 zgc:162193,LOC107672386,LOC107758488,LOC107561378,LOC107749645,LOC107678257,LOC107560630 coding upstream 435582 8785223 ~ 8816926 (+)
b3gnt7 LOC107574760,LOC107732665,LOC107668660,LOC107668489,LOC107570457,LOC107720736 coding downstream 7535 9288004 ~ 9291404 (+)
LOC122359130 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 coding downstream 134482 9414951 ~ 9426410 (+)
LOC122359294 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 coding downstream 148975 9429444 ~ 9432324 (+)
diabloa LOC107752388,LOC107588772,LOC107694024,LOC107758583,LOC107672415 coding downstream 153940 9434409 ~ 9436796 (+)
nectin3a LOC107672414,LOC107758600,LOC107694025,LOC107752386,LOC107588797 coding downstream 157547 9438016 ~ 9468883 (+)
G104937 NA non-coding upstream 2100 9249947 ~ 9250408 (+)
G104925 NA non-coding upstream 22321 9229959 ~ 9230187 (+)
G104875 NA non-coding upstream 332344 8917987 ~ 8920164 (+)
G104524 NA non-coding upstream 372089 8862178 ~ 8880419 (+)
G104508 NA non-coding upstream 489056 8702073 ~ 8763452 (+)
G104973 NA non-coding downstream 110988 9391457 ~ 9391853 (+)
G104974 NA non-coding downstream 111672 9392141 ~ 9392569 (+)
G105002 NA non-coding downstream 261897 9542366 ~ 9543202 (+)
G105101 NA non-coding downstream 417605 9698074 ~ 9698409 (+)
G105106 NA non-coding downstream 425739 9706208 ~ 9706530 (+)
LOC122358603 LOC107749646,LOC107678243,LOC107560621,LOC107758746,LOC107561373,LOC107577085 other upstream 491092 8756327 ~ 8761416 (+)
LOC122358602 LOC107749646,LOC107678243,LOC107560621,LOC107577085 other upstream 499690 8747803 ~ 8752818 (+)
LOC122358505 clca4,LOC107749648,LOC107758746,LOC107678237,LOC107577085,LOC107678235 other upstream 618537 8628860 ~ 8633971 (+)
G104466 cyp2y3 other upstream 835044 8401311 ~ 8417464 (+)
LOC122359395 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 1294093 7957364 ~ 7958415 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 235486 9515955 ~ 9523974 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other downstream 269283 9549752 ~ 9552128 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other downstream 308320 9588789 ~ 9623972 (+)
G105011 NA other downstream 389165 9669634 ~ 9673345 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other downstream 422957 9703426 ~ 9715689 (+)

Expression


Co-expression Network