G104976


Basic Information

Item Value
gene id G104976
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9393877 ~ 9394208 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155007
AAAGCTTGGCTTGGcgccgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgggttcgaatcccagcggtgcctttggGATCCCTTGTCTGTCTAAAGAATGTGCGAATCTTAGTTCTGTCCTCTACAAAGGGATAGCATGGTATGGTAAGGCAGAAGGCCAAAACCGTGTTGTCAGAAATTTTTCAAGTCTCTCAGctctgaaaataacaaaaacagaggCAAGCCGGCCACCCTTATTCAGTTGTAATTCAAACTCTTAGCTGCTGGCAAAGAATGCCAGCCCGTGCCAATGGCAGAGGGTGCCGTGGCTCAGCCGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155007 True 332 lncRNA 0.50 1 9393877 9394208

Neighbor

gene id symbol gene type direction distance location
trnat-agu_62 NA coding downstream 202 9393602 ~ 9393675 (-)
trnat-ugu_46 NA coding downstream 484 9393320 ~ 9393393 (-)
trnat-agu_61 NA coding downstream 697 9393107 ~ 9393180 (-)
trnat-cgu_32 NA coding downstream 1002 9392802 ~ 9392875 (-)
trnar-ucu_50 NA coding downstream 1257 9392531 ~ 9392620 (-)
trnat-ugu_47 NA coding upstream 128 9394336 ~ 9394409 (-)
trnat-agu_64 NA coding upstream 400 9394608 ~ 9394681 (-)
trnar-ucu_51 NA coding upstream 756 9394964 ~ 9395053 (-)
trnaa-ugc_117 NA coding upstream 1029 9395237 ~ 9395310 (-)
trnat-agu_65 NA coding upstream 1322 9395530 ~ 9395603 (-)
G104975 NA non-coding downstream 1637 9392033 ~ 9392240 (-)
LOC122358921 NA non-coding downstream 98366 9264495 ~ 9295511 (-)
G104936 NA non-coding downstream 158790 9234870 ~ 9235087 (-)
G104922 NA non-coding downstream 253455 9140058 ~ 9140422 (-)
LOC122359047 NA non-coding downstream 355549 9032599 ~ 9038328 (-)
G105020 NA non-coding upstream 26881 9421089 ~ 9423926 (-)
G105019 si:ch211-24o8.2,LOC107672367,LOC107582655,LOC107758805,LOC107752394,LOC107694021,LOC107588807 non-coding upstream 30022 9424230 ~ 9432131 (-)
LOC122359087 NA non-coding upstream 145383 9539591 ~ 9541822 (-)
G105055 NA non-coding upstream 148108 9542316 ~ 9543148 (-)
G105062 NA non-coding upstream 157713 9551921 ~ 9552439 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 347762 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 731013 8657688 ~ 8662864 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other downstream 880418 8510382 ~ 8513459 (-)
nipsnap2 gbas,LOC106581053 other downstream 1343167 8044822 ~ 8050710 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other downstream 1435646 7957836 ~ 7958231 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other upstream 40218 9434426 ~ 9436797 (-)
G105059 NA other upstream 158426 9552634 ~ 9555787 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other upstream 369663 9763871 ~ 9796923 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 1118423 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 1264726 10658934 ~ 10663588 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00020677 NA coding CM030127.1 CM030127.1 29059415 ~ 29071096 (-)