G105112


Basic Information

Item Value
gene id G105112
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9734203 ~ 9738624 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155240
attcatatttattacgACAACattggcagagagagagagagagagagagaggtcacaAAATTCCATGAAAGATCTTGTTACAATAGTCTTGCCAAACTAAcagttaaaaagtgtttttgttttgttttgttgtttttttgcattttaagaatACAAGGGCATGCAAAGtcagaaaaagcagaaatgagaagaaaacaaaaacaggacagaaaatcCCAAATCCAGACGCAGAACCCAGCATTGAGAAGGCACATTCACAGATTAAGATTAGATTAGTTCTCATTGGTCAAAGACACATTGTAGTTGGactataaaaaggaaaaagcaaCCAGAAAATAAGGAAAAGTGATACAGAACATTTAAGCAAAGACCAAGGTGATGCTAATATTGGTTTTATGCAGCTTATTAAAACCCTTTAAGAACCTGGAGAGACTTATtcttgattttaatatatttgcaaGCCGACCGATAGCTCAACAAAactagggctgcacaattagtccaaaaaagtatgaataaacattaactgaagtGTTAATTTGGGTCTACTATCACTAAACATTGAGACCAATCACAGATGGAATTAGTCAGGAAATACACTGCAAACAAATGATGCAACTAagttaaattgcaattaatcgatcaaatattactacatttattaaattgaacAGATGTAACAATTTAAAGTACGTGTAATACATTTAAGCAAACAGTTCTTATATGACATGCAGTTTCCccacacaaaataattattcaattttaccaataaaaattgaaaaacgCAATCTCAGTATTAGGGAAAAAGGTTGATTTTTGTTATAATTGTGCAGCCTACTTCAATTCTTCTAGGGTTTGCATCAGTCCGTTAGGTGCTCAAAGGgttaaaagaaaacagagaaatcTATCCTGGAGCATTTATTGATTTGAGTGACAGGTAAAGAACGACAAAAAGAGATTGTACCCTTTTTCTCTCGCCATCCTGTACTTCTCGGTTGGTGTATTTTTGACCCACATAAGTCAAAAGAGTAACAATTTCATAACACGGCAAGCAGTATGCTgttcataaatacaaataatacgcTTTCTGGCATAAATGCGTCAACACAATCAGCAGTACTAATCGAGTCTAtctatattcaaaataaataagagtTTATTTtcctgtaataaaaatacactattaaatttgcatgtatacatttccATTCTTGATAAAAACAACCTATTTTGTAAGTATGCCAGAAGCATGGACTAATCCTACTAATTGTTTACTGCGTGTAAATACTTGTCAATTTCACAAATTGAAGGCTGGCACATACTGGAGCATAGAAAAGCAAAGTTAGATAGAGCTCCACCGTCAGTGTGGTCTACAAGAGCAAATGTACCCACGACAAACCTGAAACAAAGTCACCTTCTCGTGGAAGTACCACAAGAAGCGGCTCTGtcctgggggaaaaaaaaaaagatactctAGGGTGGTTAGCTACAGATCCAGGGGCGTAGTGCAAGTGTTTGGAAACCCAACACTCTCAACCTGCTACAATATTTATGCTTGAGCTCTAGAGGTATCCAGTAACTGAATTAGAAGAATTTGTATAAGATGTAACTAGAACAGTGTTTGACAAGGTTTAGGTAATGTTAGTATTCATTGAAGCTACTATGGAAAGAAGGCAAAAGGATTCCTACAGACATCAATCGGAGCGGATGCCATGTTTAGCATGACCTAAATGAAAAGGAGACTGTGAGGGACACAATTACAGTtcattcatgttgtttttttatatctggTTGCTGAACTTTCAGAGAATGAGAGTGAAAAGTGGAGAAGACGAATGTGTCTTAAAACAAGGTTTGCGAAATATAAAAGGGAAGTTATGATATGATAAACGGTCTACTGACACATGCCGacacaaaaaaagttcaagGGTTACtcaaccccaaaatgaaaactcatatgttgttccaaaaccgTATAAgaactttgttcatcttcagaaaactaaattttatatacatgtatgaaaTATGTCTGATGGCTCTCTGATCCTCCCACAGACAGCAATGGAAACAACGCGATCCATGTCAAGAAATGGTTAATATAATCCATGTGATATCTGGGGTTCAAGCATAATTTTAGGAAGCTATAACTATAAAATCcttatttttgttgcatttgcttacaaagtattctcatagcttcggGAAAATTATAGTTGACCAACTGATGTCACGTGGATTATTTTACCGGTTGATAGCGTTAATTccattgctgtctatgaagggtcagagagctctcagatttcatccaaaaatataatgtgtgttctgaagataaaagATTGGAATTGAACAAGGGTCTAAATGAAGACAAAggtttcattttggggtggaaaaacccttataataaaattaatagccaataataaacttttatatttaataaaaattaaaaacaattttatattatataataaaaataaaacaaaattatgcaTGAAAAAATGAGGAGGTACAGAGtcaattaatttttaagattttacagtgttattaaattaacatttctcaAGACTGACGTTAAAGGTACAGTTCATCCAAAacttttaattctgtcatcatcagTTGTTCCAAAACTAAATGAATCTCTTTCCTTTGTTGAgcacaaaaagatattttgatgataGCCATagaaaatactatggaagttaATGGTTACCATCAAATgtttggttatatatatatatatatatatatatctattagaGAACACAATATATTGATATTCAATCCCTCACAACCTTGTTTCATTCACATCACAGCTAAATATGGCATCAACAATTAAATCTGCAGCcatttcagttgttttcaaATAATGGTACAACAGCCAAGATTGAGAGGCTTTACATGTTTTTAAccattaatttcattaaatgtccAACTTAACATGACAAGTCCCACAAAAGCATCAAGTCAACCTTGTTTTACCAAATTggaaatttaaatcaaatgctttttactagtcaaaatgtgtaattattagTAAGAAACTTGTGGCTATTCTGACAATACATGACAGTAGCAACAGCTCTGGTTGCTGGTGAGACCACACAAGTTTATGGAAACTCTTCCTACTGTGCTTCCTCAATGCCAACCAGTCTACACACACGAGGGCTGATACGATGGCTGACGCTGACTGAATGAAATACTGTGACTGTGTTCTCACCCTGATATGTGATGAATATGAATGACAACATGAACACaagcacgcacgcacacacacattttgggGATGCTTTCATGCAAAATAGATAACATGAGAAGCAGAGAATGAGTGTAAATTTAAAAGGTGACTGACGTCTGGAAAAGACAGTCAATTACAAACAGGCCAATCGAGAGTTAATTGTCGCTGAATCCTCTAAAGGAGAAGATGTCACTAACTTGGCGTCCCAATATGCTCTTAGATTTCTCAGCATGGACTGGCATCTGATGCCTGTAGTATGCAGCTCAAGTACAGGGCAGCCGGttcatgcgtgtgtgtgataTGACTCGAGTTAGATAAGGTAGtgctttgtattttttgctCATGTATGCACTGAGGCACGGCATTGAGGATTCTCCATGCACATGCAACACGGATAACCATCACATGAACGGATGAACGGTTACATGCAAAACAAGTGTGACCAGAACGATATTAACTACAACACCTGTTGGCTATATCAAGAGAGGCCGTTTTAGGACTTGATGTGAAGGTGGAATTGTAGATCAAATAAAGGACATAAATGTCAAGATCATTTATCATGCTTAGACAATCTGGAAAAACAGCCAAGACCTCAGCACCATTAGCATATTAATCTGGCTGCTTATATATATCCCATCTGTAATTCTGATGAGCGCAAAATGGCTCGGAGTCAAAAATCTGAACGAATGTAAAGTTAGAATGTGTCGTGCTGGCAGAATCTAAATGAACAATGCCAtttgagcaaaaatattttagtgttcTCATAATCTTCTAATCTCAGCTTTGaatgtgaacatttttaagTCAAATGTGATTATTATGAAGTTCAGCTTTgcaccaaaaatacatttcttggTACATCTGAGTCAAATCAATTTGATCAAATTATGAATTCAGATATTCTACAAACTTGGACTGAAAAAGCATAATGGAAAATCTGATTAAAATCACAcctaaaaattctgtcattaattactcaccctgaagttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155240 True 4232 lncRNA 0.35 3 9734203 9738624

Neighbor

gene id symbol gene type direction distance location
tada2a tada2a,LOC107661114,LOC107755391 coding upstream 37659 9679771 ~ 9696544 (+)
nek8 nek8,LOC107672375,LOC107758702,LOC107661116,LOC107592757,LOC107582647 coding upstream 147101 9577565 ~ 9587102 (+)
trnar-ucu_52 NA coding upstream 159260 9574855 ~ 9574943 (+)
trnat-agu_66 NA coding upstream 159621 9574509 ~ 9574582 (+)
zgc:174895 zgc:174895,LOC107672400,LOC107657114,LOC107752376,LOC103023064,LOC105911024,LOC108443501,LOC108278204,LOC106612798 coding upstream 165695 9566304 ~ 9568508 (+)
mrm3a LOC107716545,LOC107582598,LOC107672374 coding downstream 105781 9844405 ~ 9847385 (+)
p2rx8 LOC107672369 coding downstream 173032 9911656 ~ 9917112 (+)
flot2b flot2b,LOC107661103,LOC107727921,LOC106581211,LOC105011286 coding downstream 188644 9927268 ~ 9935456 (+)
galnt17 wbscr17,LOC107714690,LOC107582595,LOC107727938,LOC107554251,LOC108411682 coding downstream 210769 9949393 ~ 9965676 (+)
gdpd1 gdpd1,LOC107672421,LOC107554273,LOC107659934 coding downstream 348053 10086677 ~ 10092950 (+)
G105106 NA non-coding upstream 27673 9706208 ~ 9706530 (+)
G105101 NA non-coding upstream 35794 9698074 ~ 9698409 (+)
G105002 NA non-coding upstream 191001 9542366 ~ 9543202 (+)
G104974 NA non-coding upstream 341634 9392141 ~ 9392569 (+)
G104973 NA non-coding upstream 342350 9391457 ~ 9391853 (+)
G105109 LOC107727913,LOC108415199,LOC107672419,LOC107582599,LOC107714247,LOC107661107,LOC108277446 non-coding downstream 25247 9763871 ~ 9803117 (+)
G105141 NA non-coding downstream 55124 9793748 ~ 9795843 (+)
G105145 LOC107714397,LOC107672358 non-coding downstream 75367 9813991 ~ 9815390 (+)
G105168 NA non-coding downstream 105212 9843836 ~ 9844052 (+)
G105171 NA non-coding downstream 108211 9846835 ~ 9907918 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 18514 9703426 ~ 9715689 (+)
G105011 NA other upstream 60858 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 110231 9588789 ~ 9623972 (+)
dhrs11b.1 dhrs11b,LOC107694033,LOC107592755,LOC107752375,LOC107582609,LOC107672392,LOC107758673 other upstream 182075 9549752 ~ 9552128 (+)
camkk1b camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 210229 9515955 ~ 9523974 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other downstream 354831 10093455 ~ 10110443 (+)
G105248 NA other downstream 466215 10204839 ~ 10207452 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 614537 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 983348 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 1631624 11370248 ~ 11372691 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1909483 NA non-coding NC_048588.1 CM023242.2 18326648 ~ 18411029 (-)