G105395


Basic Information

Item Value
gene id G105395
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10336766 ~ 10337446 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155630
GCTTATTCACCCTATGCATATTTTGTGGTGGAAATGTCTATCTGAACTATTGAGCAATCATCGTGTTCTCTAGTGTTCAGTGGATCTGATCATCTGTGGATTATTCCCTAGTTTATTTGTGACCCCTGGACCATTAAACCAGTCTTTAGTCCCTGGGGtatttttgtagcaatagccaaaatacagtacattgtATGGgccaaaattttaattattttctttcgtGTCAAACATTATTAGGATATTACATATGTTCCATGGAGatcttttgtaaatttcttaccataaataacaaaactttgttttatgatatgcattgctaagaaattaatttgaacaattttaaaggccattttctcaatatttaatttttctgcaccctcagattccagattttcaaatagttgcatatgagccaaatattgtccgatCCTAGCAAACCATACTAATTAAGCTTgtcatttatacataaaaatggaCAATTATGACAGGTTATGTGGGTCACATTTAAAGTAAGCGGATCATATGTCAAGCATTTAACTTTTCTTCTTTAACTCGTTTGGTTTTCTAGGTCTATTAGTCTGTAATAGACTTGTTCTGGTTGCCGTTTTCTCATTAAACTCCGCTCTTTATCGAAGAAAAGCATCTATTAAGACTGGTTGTGTTTTATGTAGagtaatt
>TU155631
GCTTATTCACCCTATGCATATTTTGTGGTGGAAATGTCTATCTGAACTATTGAGCAATCATCGTGTTCTCTAGTGTTCAGTGGATCTGATCATCTGTGGATTATTCCCTAGTTTATTTGTGACCCCTGGACCATTAAACCAGTCTTTAGTCCCTGGGGtatttttgtagcaatagccaaaatacagtacattgtATGGgccaaaattttaattattttctttcgtGTCAAACATTATTAGGATATTACATATGTTCCATGGAGatcttttgtaaatttcttaccataaataacaaaactttgttttatgatatgcattgctaagaaattaatttgaacaattttaaaggccattttctcaatatttaatttttctgcaccctcagattccagattttcaaatagttgcatatgagccaaatattgtccgatCCTAGCAAACCATACTAATTAAGCTTgtcatttatacataaaaatggaCAATTATGACAGGTTATGTGGGTCACATTTAAAGTAAGCGGATCATATGTCAAGCATTTAACTTTTCTTCTTTAACTCGTTTGGTTTTCTAGGTCTATTAGTCTGTAATAGACTTGTTCTGGTTGCCGTTTTCTCATTAAACTCCGCTCTTTAT
>TU155632
GCTTATTCACCCTATGCATATTTTGTGGTGGAAATGTCTATCTGAACTATTGAGCAATCATCGTGTTCTCTAGTGTTCAGTGGATCTGATCATCTGTGGATTATTCCCTAGTTTATTTGTGACCCCTGGACCATTAAACCAGTCTTTAGTCCCTGGGGtatttttgtagcaatagccaaaatacagtacattgtATGGgccaaaattttaattattttctttcgtGTCAAACATTATTAGGATATTACATATGTTCCATGGAGatcttttgtaaatttcttaccataaataacaaaactttgttttatgatatgcattgctaagaaattaatttgaacaattttaaaggccattttctcaatatttaatttttctgcaccctcagattccagattttcaaatagttgcatatgagccaaatattgtccgatCCTAGCAAACCATACTAATTAAGCTTgtcatttatacataaaaatggaCAATTATGACAGGTTATGTGGGTCACATTTAAAGTAAGCGGATCATATGTCAAGCATTTAACTTTTCTTCTTTAACTCGTTTGGTTTTC

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU155630 True 681 lncRNA 0.33 1 10336766 10337446
TU155631 False 633 lncRNA 0.33 1 10336766 10337398
TU155632 False 568 lncRNA 0.33 1 10336766 10337333

Neighbor

gene id symbol gene type direction distance location
vmp1 vmp1,LOC107582631 coding upstream 354 10325905 ~ 10336412 (+)
cltcb cltcb,cltc,LOC107554261,LOC107659923,LOC108443353 coding upstream 11346 10300340 ~ 10325420 (+)
dhx40 dhx40,LOC107659925 coding upstream 37491 10286955 ~ 10299275 (+)
LOC122358538 NA coding upstream 95518 10238177 ~ 10241248 (+)
relb LOC107715143,LOC107582588,LOC107701429,LOC107659928,LOC107727919,LOC107554269 coding upstream 137488 10190587 ~ 10199278 (+)
rps6kb1b rps6kb1b,rps6kb1,LOC107701421,LOC107597508,LOC107659922,LOC108443350 coding downstream 5990 10343436 ~ 10350306 (+)
LOC122358985 LOC107701419,LOC107713466,LOC107728785,LOC107597592,LOC100001991,LOC107582628 coding downstream 94119 10431565 ~ 10441298 (+)
LOC122359095 LOC107713423,LOC107701398,LOC107659919,LOC107717187,LOC107597513,LOC107582627 coding downstream 184247 10521693 ~ 10539063 (+)
LOC122358614 LOC107713423,LOC107701398,LOC107659919,LOC107597513,LOC107717187,LOC107676612 coding downstream 207281 10544727 ~ 10558178 (+)
LOC122359094 LOC107713423,LOC107701398,LOC107597513,LOC107659919,LOC107717187 coding downstream 227043 10564489 ~ 10580681 (+)
G105242 NA non-coding upstream 158540 10177872 ~ 10178226 (+)
LOC122358545 NA non-coding upstream 158938 10171862 ~ 10177828 (+)
G105240 NA non-coding upstream 161144 10173307 ~ 10175622 (+)
G105199 LOC107582590,LOC107715485,LOC107701431 non-coding upstream 167054 10149962 ~ 10169712 (+)
G105225 NA non-coding upstream 204901 10129551 ~ 10131865 (+)
G105411 NA non-coding downstream 50037 10387483 ~ 10387744 (+)
G105413 NA non-coding downstream 54013 10391459 ~ 10391718 (+)
G105416 NA non-coding downstream 67573 10405019 ~ 10405333 (+)
G105458 NA non-coding downstream 126756 10464202 ~ 10464899 (+)
G105469 NA non-coding downstream 169545 10506991 ~ 10507793 (+)
G105248 NA other upstream 129314 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 226323 10093455 ~ 10110443 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 621077 9703426 ~ 9715689 (+)
G105011 NA other upstream 663421 9669634 ~ 9673345 (+)
traf4a traf4,traf4a,LOC107727926,LOC107758738,LOC107672397,LOC107661115 other upstream 712794 9588789 ~ 9623972 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other downstream 15715 10353161 ~ 10390600 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 384526 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 1032802 11370248 ~ 11372691 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 1690109 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 1756511 12093957 ~ 12097646 (+)

Expression


Co-expression Network