G105469


Basic Information

Item Value
gene id G105469
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10506991 ~ 10507793 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155745
GGGACAGCGAGGGTGAAGCATATATCTCGCATACTAAATATAATAGGGGTACTGTATGTATACGATTTATCCAGGGCTTCATTTACGTTTTATTGGAAGACATCATGCatagtatgttttattattattattattttttttttttcaaatatgctTTAACGCGAATATGGTTTTAGAAACAAAATAGACATATGTTAGGGGAGCGGGTATGAATTATGAAATTTGATTGTTTATTTGTGGTGGTTGTTATAAATACATCAGGTAATATTCATAGTGTGTAAGGTTTTTTCTTAATTGATATGGGTATCaagttactgaaaaaaaatattattaaaaatgacaatctTGCTAATGCATAATGCGCGTGAGTAAAGAGCGTGTGGGAAAACTGCAGATTAAGTATAGGTCATAAAATGTCAGTGATTTGTGGAAACATAACAAGGTGTTCAAGCTCTGGCCACGATTGCGATTATCCATGCATAAAAGGGGTTTTTGTATTATTGGTATTGGgagttatttttgcattactCTGAGAAGAGGAGTTCTCATAAACTTAAATGATGAGTTTTTGGACTCCCATCATTCATATCTTGCGCAGGTCTGTGCCAGAGGCATTATGGGGCAGGTTTGTACTGATGAGATGCCAGTGCAATTATCTGCTTGCTCTGTTGTTTTCCTCTTGACCCTGTTctcgagaaagagagagagagagagaaagagtcttTTGTTAGAGACACACTTTTTGTTGCATGTATACGCGCTGatggaaaataataaagctG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155745 True 782 lncRNA 0.35 2 10506991 10507793

Neighbor

gene id symbol gene type direction distance location
LOC122358985 LOC107701419,LOC107713466,LOC107728785,LOC107597592,LOC100001991,LOC107582628 coding upstream 65693 10431565 ~ 10441298 (+)
rps6kb1b rps6kb1b,rps6kb1,LOC107701421,LOC107597508,LOC107659922,LOC108443350 coding upstream 156685 10343436 ~ 10350306 (+)
vmp1 vmp1,LOC107582631 coding upstream 170579 10325905 ~ 10336412 (+)
cltcb cltcb,cltc,LOC107554261,LOC107659923,LOC108443353 coding upstream 181571 10300340 ~ 10325420 (+)
dhx40 dhx40,LOC107659925 coding upstream 207716 10286955 ~ 10299275 (+)
LOC122359095 LOC107713423,LOC107701398,LOC107659919,LOC107717187,LOC107597513,LOC107582627 coding downstream 13900 10521693 ~ 10539063 (+)
LOC122358614 LOC107713423,LOC107701398,LOC107659919,LOC107597513,LOC107717187,LOC107676612 coding downstream 36934 10544727 ~ 10558178 (+)
LOC122359094 LOC107713423,LOC107701398,LOC107597513,LOC107659919,LOC107717187 coding downstream 56696 10564489 ~ 10580681 (+)
dixdc1a dixdc1a,dixdc1,LOC107713457,LOC107701411,LOC107699911,LOC107717189 coding downstream 156017 10663810 ~ 10672600 (+)
cadm1b cadm1b,LOC107713448,LOC107582575,LOC107662762,LOC107699904,LOC107748594,LOC108435304 coding downstream 374741 10882534 ~ 11028778 (+)
G105458 NA non-coding upstream 42092 10464202 ~ 10464899 (+)
G105416 NA non-coding upstream 101658 10405019 ~ 10405333 (+)
G105413 NA non-coding upstream 115273 10391459 ~ 10391718 (+)
G105411 NA non-coding upstream 119247 10387483 ~ 10387744 (+)
G105395 NA non-coding upstream 169545 10336766 ~ 10337446 (+)
G105471 NA non-coding downstream 4596 10512389 ~ 10584918 (+)
G105485 NA non-coding downstream 92985 10600778 ~ 10605466 (+)
G105517 pih1d2,LOC107701408,LOC107577555,LOC107597596,LOC107699912 non-coding downstream 164972 10672765 ~ 10675515 (+)
G105525 si:ch211-247l8.8,LOC107597517,LOC108413672,LOC108441967,LOC108413998 non-coding downstream 179551 10687344 ~ 10692785 (+)
G105526 si:ch211-247l8.8,LOC107597517,LOC108413672,LOC108441967,LOC108413998 non-coding downstream 184548 10692341 ~ 10696794 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 116391 10353161 ~ 10390600 (+)
G105248 NA other upstream 299539 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 396548 10093455 ~ 10110443 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 791302 9703426 ~ 9715689 (+)
G105011 NA other upstream 833646 9669634 ~ 9673345 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other downstream 214179 10721972 ~ 10728395 (+)
LOC122358628 NA other downstream 862455 11370248 ~ 11372691 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 1519762 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 1586164 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 2329789 12837582 ~ 12848667 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G225915 NA non-coding CI01000053 null 1756745 ~ 1760172 (+)
rainbow trout (Oncorhynchus mykiss) G224184 LOC106605850 non-coding NC_048567.1 CM023221.2 11777789 ~ 11778204 (+)
eurasian perch (Perca fluviatilis) G189147 NA non-coding NC_053129.1 CM020926.1 33140603 ~ 33143547 (+)