G105513 (zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332)


Basic Information

Item Value
gene id G105513
gene name zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10721972 ~ 10728395 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155825
GTTACAAGTTTATTTTAGAACACTGACGTATACAGAGATGTGTCTGAACCCACATAGAGAAGGGAAAAGGAATCTACACCTCTATCTGCAGCATCAAAATCACCACACAGTGCTTCAAAACAGCATCTCTATgctgaaacaaagagaaaaaacaaaaaccctacAAGGCTATAATACAAAATTTATGCACAAAACAAAGTAACAATAATTGGGCACCTTTTAAAAGTTACACAAAGAACTGGTGCTGAGGTAGACAATACAATAAAGTAAAACACGACAAATGTAAAACCATTTCGACACCAAGAACGCGGTCTTGTCGCTAGAACAAGGCAAATGGAGCGAAAATGGTCGTTTGGTCCCACGTGGAGCCTCAGTCCGAGTTTTCATTTGTGTAACGATGGCACAAACATGGGCGCACTGAGTGACATGGCTACTTCCTGTCTGAAAGCAAAGTAAAACACAGTGATACAGCGGCAGGGATGCCAGGTTTTTCACTTAAATGCTGACCTGTAGATTTATTGCTCGTGGCGACCAAAACAAAAAGGGCTTACGGAACTAAACGCAGCGTCCGTAACGACAAAGAAAGTGTAGGTGTTTATCCTAAAATCGGTATCGGCGATGTTCCGCGAGTAAAGTGAAGGCATCCCTGATTGCCTAAGAGCACAGTTCATATCAAGGTGACTTTGCATAAAGACACAAATACAGGGCAGATGACGTATCAAATCATTTACAGGGTGTCTGTCAAGAGCACCTCTTTGTTGCTAACCGGTGCATGTATTTAACACTGAAGAAGTCGACCACATTGActcacactgcacacacaaGGACCAGTACAGACCGTATAGGTGACTCTAATCTTACAGTGAGCGGTGAACAcgatacaaacacacagatacagcTTTACTTTTCTCGTCTCGCAGGTCGCTTGTGCTCCTTGACCTACAGCTCTTGGCATTAGTTCACTCACAGTCATTTTATACTCAAGATGTGGAATCATCATCATACGAACTGACACCCAGCAGCAATGActacaatatgtttttacaaacatctACTACTTGTATATgtttaacattgtaaaataagcacaagaaaacagttttttttccacgCAAATCAAGAACAAGCACAAATGCAAAAGATACCATAAAAATATTCGCCtcactcaaaatgaaaaaaaaaaacaaggaacagGGGTCGCACAATACCCCgtacaaaaatacaacatattCCCTTATCAAAGTGCCGCGTTTGGCTCTTGTCGagagatttattttcacagaaaatcacctattggtttttttttttttgttttctctagcGAACTTTTTCCACGTAACTGCACGCATCAGTACCGCATCTCTGATGACTTACCGCTTTAATAATTTTCacataaaaacatcatttttattcacattgtTTCAAGTTTATCCCCTCAAGTATCTAATAACTAAACATTTTCTCAACGCTATTCTAAAATCATCTAGAACGTATGCATCTACCCTTTCAGACTTGAACGCGTTTCATCGTAAGGAGTGTAAAATATAACGACGGACGAACCGGGCTGTTGGTtttttcgttctttttttttctctagtgAATGGAAACATGAAAGTGGATGTGAATGAAAcagcaaaacaagcaaaacaaaagtgtGCTTTTGCTTTAGTGCAAAACTGAGAGCAGAGTAGAGGTAGCCCTGAAACAGATGGCCGAGAGGCTGATATGCACACTGCTACTATGCTGAACACTAAAATACCACTGAACAATACACAGACCCACACGGAATCAGCATTTAAGATGTGGTCGCATTAGCAGATTTCAGAATCGTTTCATAAGCAAAAAATGGTCCATTGTCAATACCATAGTTATGGGTGAATTTTATATGAATGCGCGTGTTATTTATATGAAAACGTACGGTTTTAAGAGAACAGACGTAAGGATGAAGGTCTATAGAATGTTCGTCCAATCGCATCGCTCAGTCCGAGGACTCGTCAGGTGAAGCGTAACTCTTTTTACGAGGTGGCGATTTCATATGAATGCGTACGGTGCCATTCGTATGAAATTGCgtgatttttattcaaaaaaagaagaatttgaAACTGTTGCGAAATCTGTTAAAATGGAGATCTTTCGTCCTTCTGTAAAATTGCTGATCGAATTGATTCGCATTGAAAAGAAAGGATTTCCAACCTTATCTGATGAGAAAACGTAACTATTTTAGGTGATTTCGTACGAAAATGCGATTTAAAAACCCCCGCAAATTTGAACCTGCAGCGAAATCTGAAAAAATTGAACTCTTTCACTCTTGAGTAAAATTTCTGAACATGCTGATTCCTATAGAAAAGACTGGATTTCCCACCTAACAGTTTTATGATTAGGTGATTTTGTGTGAATTCCTACAATTAGATTTATGCAGAAATGGACgatttttagaaaaatgcattaaatgcaccCTTAACTTAACCGTCAATGGTATACAAAAAGTATAAATGAAATTGTACAATTGATCACCAAttgccaaaatataaaatagttacGTATTAGTTGGTATACAAAAAGGAAATGTGACCACACCTTTACCGTCTTTTTAGTAATGCagaatacatttaaacacagtTAAATGCAAAGAACTACAATcatattgataaataaaacatatgccAATTATCCAAAACGTAAGCACACACAGGGCCGCATATTGAACGTCGCAAACAACATCCGAATTTTCTCTTAAATTTCTCTGGGATTCTGTGAGGGCCTGAAGATGTGGCATTCTACATGCATCGTACAGCTTTTAAACAAAGCTCAGCAGGAAATGAGAGACAAAGActggtacaaaaataaatctagcATGTGAGGTAACAAAATTAGGCAATTCAAGTAAAACGTTCGAACAGAGATGACAGAACACAAACTACGACGGCGAGCTAACTACAGTTATCCTCAGCAGAAGACCGCAGAGACGTATACTGCATtgtggtttttaaatgtaaaaaataatctctttttaattcagaaattgaTTCATGGGTACGATATGAACATGTCATTCGGGTAAAATGCCTGTAGATGCAAAACTGCGATTTCGCCACGTTAACAtgggaacataaaaaaaaaaaagaaatcaactGACATGCTTCATTATTTGGTGTGAAAGTGACTGAAATGAAAGCAGATCAAAGAGATTCACCTCTCTGGCTTCGTCTGAATGCACTGAACGCAGAAATGGtgctgaaaacaacaaaaaaaaacgggCCTCTGAAACTCTGAAAGTGCACAGTGTAGTTATTTAAGGTTGAATAAATGTCCCTGAACATCCACTACAGTTGCTTGGCAGCACAATTTGGATGTACCACTgagaaaagctgttttgttaAGCACTTTATTACGCTTTAAAGAAAATGACTAATGGGTCCAACCCTGTGCATTTCcttgcatgtatttataaaaaaaacatgaaaattgaGGACTAGAGAGCCTAATAATGAACTTAAGGGAGCAATTTGCTAAAAAAGGGCATAATTTCGTTCGCTAATGTGTTTAGCTCTTCTATttcatcgtgtgtgtgtgagttctcAGCTTTGGTCCACGTTTTTTATTTGACTCAGAATAGCTCCATTAAGACCCCCACGAAATCAAAATAGCAGGCTTCGTGTCCACTTGTGTTAGCTTTTAGGTTGCTAGCGTATTCTGAACGTCGAATTTTAGCGGATATGCATTTAAAACGACGGCTGCGATGAAACTAAAGCCTACTGGATGATCCCTATGACAGATTTCACGGGGTCTCGAAAATCTATGGCTCATGTACTGTCCACGGAGAAAAAAAGTGATGGGAATCCTTATTTGAGCAAAACATTACAAGTATGATCATGCAGTGAATTTCTCCAATCGACAGGGTGGAATGCAGAAAAATGGATCATCGTCATAGGGGTGGACTGTACTAACACTTTCTCCAAATTCACATCCCTTTATCACGTATAACATTTCCGtttcataaacatttgtgaGTGCAGTTACATCCTAAAAATGTGCACGAATGCATGTCACAAACgaaaggtcaaaaaaaaaatatccacgTCACATTTCGTCACTTTGACCACGCCCCCTCACCGTCTTCGTCCCTGGACCAAAAGCAAACTTTCAGGTGAATTGTCCTCGGGCGCATCCTGCCACTTTCTCGTTGGGTTTCGTCGGGCCGTCTCACACGTAGCAGAGGTACAGGTAGGTCTTCTCTATCCTCCAGTCTGGGGGCACGTCCTCGGGCTTGTGGGCCTTCATGTGCTTCTGCATGGACGAGAGGCTGGGGCAGTACTCCTGGCAGATGGTGCACTGGTAGGGCGAAGCGCCGTTGTGGGTACGCAGGTGTTTGATCATGGCGGAGTAGTCCCGAGAGCGCTGGTGGCACAGCTTGCACTCAAACGGCTTCTCACCTGTGCGACGCGGTAGTGGGTCTCCAGCTGGTGCTTGAGGCTGAACTTCTTTCCGCAGCCGTTACATTCATAAGGcttttctccggtgtggatGCGCTTGTGACCCTTCAGAGTGCTCTCGTCACGGAAGCAGCTCCCGCAGAACTCGCACTCGAACGGGTGGTCACCTGCCGTGCAGAGAGACAACCGTGAAGCCGGGGAGCGATCAAACGACTCGCACGAGCCACTTCTTTTCTTAGTGAATCATAAACACACTGTGCTACCGCAGGAACAAACTGTGCTTATGAGTCGAATCCAAAACGCACAGCACTACAGCCCCTTGTTTTTATAtgccttattttgtttattgcttTACTTTGTTGTTGTACTCGCAGTATTCCTCTTTTTTGATTCATGATCCCGG

Function

symbol description
zbtb16b Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within positive regulation of type I interferon production. Located in nucleus. Is expressed in several structures, including anterior neural keel; atrium; hindbrain neural keel; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in acute promyelocytic leukemia. Orthologous to human ZBTB16 (zinc finger and BTB domain containing 16).
zbtb16 Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; protein homodimerization activity; and transcription corepressor binding activity. Involved in several processes, including positive regulation of cell differentiation; positive regulation of ossification; and regulation of transcription, DNA-templated. Acts upstream of or within negative regulation of transcription, DNA-templated. Located in PML body and nuclear speck. Part of transcription repressor complex. Implicated in acute promyelocytic leukemia.

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 16-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155825 True 4836 TUCP 0.41 2 10721972 10728395

Neighbor

gene id symbol gene type direction distance location
dixdc1a dixdc1a,dixdc1,LOC107713457,LOC107701411,LOC107699911,LOC107717189 coding upstream 49372 10663810 ~ 10672600 (+)
LOC122359094 LOC107713423,LOC107701398,LOC107597513,LOC107659919,LOC107717187 coding upstream 141291 10564489 ~ 10580681 (+)
LOC122358614 LOC107713423,LOC107701398,LOC107659919,LOC107597513,LOC107717187,LOC107676612 coding upstream 163794 10544727 ~ 10558178 (+)
LOC122359095 LOC107713423,LOC107701398,LOC107659919,LOC107717187,LOC107597513,LOC107582627 coding upstream 182909 10521693 ~ 10539063 (+)
LOC122358985 LOC107701419,LOC107713466,LOC107728785,LOC107597592,LOC100001991,LOC107582628 coding upstream 280674 10431565 ~ 10441298 (+)
cadm1b cadm1b,LOC107713448,LOC107582575,LOC107662762,LOC107699904,LOC107748594,LOC108435304 coding downstream 154139 10882534 ~ 11028778 (+)
LOC122359106 LOC107582581,LOC107713463,LOC107701416,LOC107597512,LOC107717185,LOC107659920 coding downstream 406958 11135353 ~ 11138624 (+)
LOC122359111 pou2af1,LOC107582583,LOC107717181,LOC107713464,LOC107597594 coding downstream 433689 11162084 ~ 11172203 (+)
LOC122358387 LOC107717180,LOC107597510,LOC107713465,LOC107582585 coding downstream 526928 11255323 ~ 11259381 (+)
LOC122358473 LOC107701401,LOC107713429,LOC107582582,LOC107659936,LOC107717183 coding downstream 562958 11291353 ~ 11297720 (+)
G105526 si:ch211-247l8.8,LOC107597517,LOC108413672,LOC108441967,LOC108413998 non-coding upstream 25178 10692341 ~ 10696794 (+)
G105525 si:ch211-247l8.8,LOC107597517,LOC108413672,LOC108441967,LOC108413998 non-coding upstream 29187 10687344 ~ 10692785 (+)
G105517 pih1d2,LOC107701408,LOC107577555,LOC107597596,LOC107699912 non-coding upstream 46457 10672765 ~ 10675515 (+)
G105485 NA non-coding upstream 116506 10600778 ~ 10605466 (+)
G105471 NA non-coding upstream 137054 10512389 ~ 10584918 (+)
G105539 NA non-coding downstream 25038 10753433 ~ 10775353 (+)
G105546 NA non-coding downstream 50853 10779248 ~ 10785938 (+)
G105550 ncam1b,LOC107713449 non-coding downstream 57626 10786021 ~ 10796377 (+)
G105587 LOC107748591,LOC107582621,LOC107713446 non-coding downstream 344928 11073323 ~ 11452038 (+)
LOC122359117 NA non-coding downstream 370459 11098854 ~ 11100427 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 331372 10353161 ~ 10390600 (+)
G105248 NA other upstream 514520 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 611529 10093455 ~ 10110443 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 1006283 9703426 ~ 9715689 (+)
G105011 NA other upstream 1048627 9669634 ~ 9673345 (+)
LOC122358628 NA other downstream 641853 11370248 ~ 11372691 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 1299160 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 1365562 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 2109187 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 3188178 13916573 ~ 13917262 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G225809 NA non-coding CI01000053 null 1529142 ~ 1531002 (-)