LOC122358628


Basic Information

Item Value
gene id LOC122358628
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11370248 ~ 11372691 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156035
CTGACTCCCGGTTTTGACCCTTTTCCGCTTTTGACCTACGGCTTCGGACTCTCCTCTGATTGGTAGCTCTGCTACTGAAAAAAAGCCCGATCCATTCATGGAAATGGGAGCGATCGGTgctttatcactgtgtGTGGAAACACCTAGAGCCGTGTTTGGTGTGCCCCTCATTAGTCTGAGGAAGAGTGGACAGATGAGGCAGGGTCTTCCTCTGGCGCTCACACACATGGTGGAGTTTGTGGAGAAGCACGGTCTCAGCAAGATCGGCCTGTTCATAGTCGGCGGATCAGTACAACGCTGCAGGGACCTAAAGAAAGGTTTCGATGATGGAGGCTTTCCAGAGCGTGACAGTAGGGATGTAGATACTTGGGCCTCCTTACTGAAACATTTCCTCAAGGAAATACCTGGTGGACTTATCCCGGAGCCACACAAGACACAACTGCTGCAGGTGTTCAGGGATTCAAAAAAAGAAGAGCTGAATCAGGCTTTGAGGACTGTGCTGAAGACTCTTCCAGAGGAACATTTCAATGTCCTCTGTTATCTAATGTACTTCCTGTCCCGTGTTGCCGCTGAGAGTCATTTCAATCGAATGACATCTACAAAGCTGGCAAGCGTTTTTGGATCCAACATCTTTCACGTTCCTTTCAGCCCCACCATGTTTAAGGAACAG
>XM_043258505.1
TGTTAAAATGCGGTCGATTCTCTGTAAAACGAGACCATTTTTATCAATGTACTCCAAAATATGTGATTAGGGCACTGTTTTAAAGCCAAATATGCAAAAATCCCCCAAACGCCGCAGAGCTGAAGGGGTTCATCAGAATATTCCACATCATCATGACGCGACGAGTGCAGCGGTTATTTGAACGTTCTTTTTAGAATTCTTTGTTGGGAGTTTTGGAGATTTGTGCGGTTGGTGTTTTTGTGCGTTGCTTTTTCACAGTGAATATTTCTACGGTTTTTACGGTTTTTGACTCTTTTTCGGACTTTGACTATCGGCTTTGGATTCGCGTCGTATTTTGACATTcggtttttgacttttttctggttttgacaCTGATTTTGACTCGATACTGACTCCCGGTTTTGACCCTTTTCCGCTTTTGACCTACGGCTTCGGACTCTCCTCTGATTGGTAGCTCTGCTACTGAAAAAAAGCCCGATCCATTCATGGAAATGGGAGCGATCGGTgctttatcactgtgtGTGGAAACACCTAGAGCCGTGTTTGGTGTGCCCCTCATTAGTCTGAGGAAGAGTGGACAGATGAGGCAGGGTCTTCCTCTGGCGCTCACACACATGGTGGAGTTTGTGGAGAAGCACGGTCTCAGCAAGATCGGCCTGTTCATAGTCGGCGGATCAGTACAACGCTGCAGGGACCTAAAGAAAGGTTTCGATGATGGAGGCTTTCCAGAGCGTGACAGTAGGGATGTAGATACTTGGGCCTCCTTACTGAAACATTTCCTCAAGGAAATACCTGGTGGACTTATCCCGGAGCCACACAAGACACAACTGCTGCAGGTGTTCAGGGATTCAAAAAAAGAAGAGCTGAATCAGGCTTTGAGGACTGTGCTGAAGACTCTTCCAGAGGAACATTTCAATGTCCTCTGTTATCTAATGTACTTCCTGTCCCGTGTTGCCGCTGAGAGTCATTTCAATCGAATGACATCTACAAAGCTGGCAAGCGTTTTTGGATCCAACATCTTTCACGTTCCTTTCAGCCCCACCATGTTTAAGGAACAGGGGCAGTGTAATGCTTTGATTAAGCACCTGCTGGACAATCTGATCCACCTGCTGCCAGACATGTATCTTCATGCATCCGCCAGCAACACAGCAattaaaggTTACCAAAACTGGACGACTTGGGCGAATGAGAAAAGCGATTCAGAGGTTTTGGAGGAATTTGTGCTCATGCACTCACAGCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156035 False 670 TUCP 0.49 5 11370636 11371927
XM_043258505.1 True 1244 mRNA 0.46 7 11370248 11372691

Neighbor

gene id symbol gene type direction distance location
LOC122358473 LOC107701401,LOC107713429,LOC107582582,LOC107659936,LOC107717183 coding upstream 72528 11291353 ~ 11297720 (+)
LOC122358387 LOC107717180,LOC107597510,LOC107713465,LOC107582585 coding upstream 110867 11255323 ~ 11259381 (+)
LOC122359111 pou2af1,LOC107582583,LOC107717181,LOC107713464,LOC107597594 coding upstream 198045 11162084 ~ 11172203 (+)
LOC122359106 LOC107582581,LOC107713463,LOC107701416,LOC107597512,LOC107717185,LOC107659920 coding upstream 231624 11135353 ~ 11138624 (+)
cadm1b cadm1b,LOC107713448,LOC107582575,LOC107662762,LOC107699904,LOC107748594,LOC108435304 coding upstream 341470 10882534 ~ 11028778 (+)
LOC122359584 NA coding downstream 4714 11377405 ~ 11379430 (+)
jam3a jam3a,LOC107699899,LOC107662760,LOC107597526,LOC107713445 coding downstream 185322 11558013 ~ 11566017 (+)
vps26b vps26b,LOC107582573,LOC107699898,LOC107748589,LOC107597524,LOC107713444 coding downstream 194699 11567390 ~ 11573448 (+)
acad8 acad8,LOC107582571,LOC107713443 coding downstream 202879 11575570 ~ 11579639 (+)
zgc:77784 LOC107582568,LOC107662767,LOC107699896,LOC107748585,LOC107597576 coding downstream 283164 11655855 ~ 11704963 (+)
G105628 NA non-coding upstream 31315 11338265 ~ 11338933 (+)
G105623 LOC107729090,LOC107662800,LOC107586245 non-coding upstream 38948 11330420 ~ 11331300 (+)
G105622 LOC107662753,LOC107729089,LOC107662756,LOC107717280,LOC107657263 non-coding upstream 39928 11329925 ~ 11330320 (+)
G105601 LOC107713465,LOC107717180,LOC107597510 non-coding upstream 185146 11180032 ~ 11185102 (+)
LOC122359117 NA non-coding upstream 269821 11098854 ~ 11100427 (+)
LOC122358459 NA non-coding downstream 101737 11474428 ~ 11477539 (+)
G105650 NA non-coding downstream 183187 11555878 ~ 11556298 (+)
G105730 NA non-coding downstream 353856 11726547 ~ 11729150 (+)
G105736 NA non-coding downstream 380836 11753527 ~ 11755519 (+)
G105739 NA non-coding downstream 389704 11762395 ~ 11762689 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 641853 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 979648 10353161 ~ 10390600 (+)
G105248 NA other upstream 1162796 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 1259805 10093455 ~ 10110443 (+)
dusp14 dusp14,LOC107661112,LOC107672422,LOC107727911,LOC107554288,LOC107713882,LOC107582606 other upstream 1654559 9703426 ~ 9715689 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other downstream 654864 12027555 ~ 12030549 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 721266 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 1464891 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 2543882 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 2584506 13957197 ~ 13961807 (+)

Expression


Co-expression Network