LOC122358755 (LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788)


Basic Information

Item Value
gene id LOC122358755
gene name LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12027555 ~ 12030549 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156363
TGCCTGGCTCTGGATCAAAAGCTCTGCAATATGTGTGTGTCCTTGTAGGGGCCCCGACTACACGAGAATCAACAAGCTGAACAGAGAACAGCGTCGGACATGAGGCTTTTACTGAATGTTCCCCGGCTAGCCTCACGGGCTTTCAGCACAACAGTCCggcaaatgaaaaacaaggTGCCTGACAAACAGAAGGTGTTCCTGGAGGATAACGGTCTGCCAGTTCATATTAAAGGAGGCACCACTGATGTCCTTCTATACCGTTTGACCATGTCCATCACAATAGCAGGCACTGGTTTTGCCTTTTACTGGTTGCTGTTGGCCAGTATGCCCAAGAGTAAagcataatacatttaaaaccgCATGATGCTGTACAAAtctatttcattatatatacctttaacaataaaacacaagaatacATTAAATTCTACCACTACATCTTTCATTCAGAAGTGTCTGGTTGCTACAatatacactgctgttcaaaggtgtttgagaaatgtttattattattcatgtactTATGCtcaacaa
>XM_043258590.1
CTGGCACTGGGCTGTTCAGAGTGATCTCTCCCCGCCTGGCTGCCTGGCTCTGGATCAAAAGCTCTGCAATATGTGTGTGTCCTTGTAGGGGCCCCGACTACACGAGAATCAACAAGCTGAACAGAGAACAGCGTCGGACATGAGGCTTTTACTGAATGTTCCCCGGCTAGCCTCACGGGCTTTCAGCACAACAGTCCggcaaatgaaaaacaaggTGCCTGACAAACAGAAGGTGTTCCTGGAGGATAACGGTCTGCCAGTTCATATTAAAGGAGGCACCACTGATGTCCTTCTATACCGTTTGACCATGTCCATCACAATAGCAGGCACTGGTTTTGCCTTTTACTGGTTGCTGTTGGCCAGTATGCCCAAGAGTAAagcataatacatttaaaaccgCATGATGCTGTACAAAtctatttcattatatatacctttaacaataaaacacaagaatacATTAAATTCTACCACTACATCTTTCATTCAGAAGTGTCTGGTTGCTACAatatacactgctgttcaaaggtgtttgagaaatgtttattattattcatgtactTATGCtcaacaacatttaaagtgtcttcactgtcacgtttgatcaatttaatgcgtcTTGGCTGAATAAAAACTTCCAAAACTTTA

Function

NR:

description
PREDICTED: cytochrome c oxidase subunit 7A2, mitochondrial-like

GO:

id name namespace
GO:0005746 mitochondrial respirasome cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156363 False 534 lncRNA 0.42 4 12027595 12030475
XM_043258590.1 True 648 mRNA 0.42 4 12027555 12030549

Neighbor

gene id symbol gene type direction distance location
supt5h LOC107586261,LOC107657557,LOC107662786,LOC107597543 coding upstream 4377 12011232 ~ 12023178 (+)
il15l NA coding upstream 17924 12001697 ~ 12009631 (+)
plekhg2 LOC107586265,LOC107662784,LOC107726101,LOC107729120,LOC107657556,LOC107597579 coding upstream 25995 11965423 ~ 12001560 (+)
spint2 LOC107726106,LOC107662785,LOC107586289 coding upstream 75428 11945085 ~ 11952127 (+)
zgc:112083 zgc:112083,LOC107726099,LOC107662779,LOC107729102 coding upstream 184931 11837084 ~ 11842624 (+)
sgsm2 sgsm2,LOC107729122,LOC107728220 coding downstream 68086 12098635 ~ 12144191 (+)
ulk2 ulk2,LOC107662799,LOC107729108,LOC107717276,LOC107657566 coding downstream 184700 12215249 ~ 12243233 (+)
usf1 usf1,LOC107601709,LOC107657261,LOC107717282,LOC107586305,LOC107677518 coding downstream 360585 12391134 ~ 12397148 (+)
LOC122359162 gkup,LOC107709108,LOC107717281,LOC107657260,LOC107586304,LOC108436512 coding downstream 367212 12397761 ~ 12404693 (+)
ubash3bb ubash3bb,LOC107677523,LOC107709118,LOC107586242,LOC107601707,LOC107657259,LOC108436514,LOC108278382 coding downstream 374288 12404837 ~ 12418311 (+)
G105819 exoc3l2b,LOC107662783,LOC107586290,LOC107729130,LOC107597542 non-coding upstream 123726 11901351 ~ 11903829 (+)
G105739 NA non-coding upstream 264866 11762395 ~ 11762689 (+)
G105736 NA non-coding upstream 272036 11753527 ~ 11755519 (+)
G105730 NA non-coding upstream 298405 11726547 ~ 11729150 (+)
G105650 NA non-coding upstream 471257 11555878 ~ 11556298 (+)
G105860 NA non-coding downstream 39750 12070299 ~ 12070863 (+)
G105870 NA non-coding downstream 61305 12091854 ~ 12093153 (+)
G105880 NA non-coding downstream 175859 12206408 ~ 12248991 (+)
G105890 NA non-coding downstream 221340 12251889 ~ 12252728 (+)
G105901 NA non-coding downstream 239082 12269631 ~ 12270174 (+)
LOC122358628 NA other upstream 654864 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 1299160 10721972 ~ 10728395 (+)
snx19b LOC107713467,LOC107701420,LOC107659921,LOC107728781,LOC107597509 other upstream 1636955 10353161 ~ 10390600 (+)
G105248 NA other upstream 1820103 10204839 ~ 10207452 (+)
ypel2b LOC107659943,LOC101067200,LOC106931471,LOC106940241,LOC106603438 other upstream 1917112 10093455 ~ 10110443 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other downstream 63408 12093957 ~ 12097646 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other downstream 807033 12837582 ~ 12848667 (+)
G106376 cluh,LOC107685050 other downstream 1886024 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 1926648 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 2882362 14912911 ~ 14928225 (+)

Expression


Co-expression Network