G106354


Basic Information

Item Value
gene id G106354
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13692379 ~ 13692893 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU157134
CTGCTCCAGCAGTAgagttttctgcttgtttttggCCAGCTGATAAGCAGTGCAGGACCCCTGGATCCCTGCGCCAATGACGATGCAGTCGTAGACTTCCGACGACATTTCCAGCTTTTACTTCCTCCTCTAAGATTCGTCTGACACGCGAACACGACGAACTTGCGTTAACCTTCTTTTCGCGTTAGTTCAGAGTTCTCCGGTTTCAGTTATATAACCGCGATCAGCTGAACGCAAGACCCGCCTTCCGGGTTTACAGCTCGCGAAAGTTTAGCGAGCGCTTAACACCTTGTGGATTCTCGAGCACGAGCATTTCGAAAAGATTCGATACCTATTCAACTTTTCGGAtagAGTAAAGAGATAAACAGCCCAAGTCGCTTACTCCAATCAGAAGTGACAGCCATAAACTGCATGACGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157134 True 420 lncRNA 0.48 2 13692379 13692893

Neighbor

gene id symbol gene type direction distance location
LOC122358500 LOC107718289 coding upstream 24968 13604091 ~ 13667411 (+)
LOC122358501 LOC107690467,LOC107743726,LOC107585604,LOC107664918,LOC107718289 coding upstream 98700 13577002 ~ 13593679 (+)
si:ch1073-145m9.1 si:ch1073-145m9.1,LOC107592629,LOC107690475,LOC107718303,LOC107743751 coding upstream 127657 13560833 ~ 13564722 (+)
ift20 ift20,LOC107743753,LOC107585565,LOC107683839,LOC107601740,LOC107718287 coding upstream 178884 13511197 ~ 13513495 (+)
sae1 sae1,LOC107683835,LOC107585558,LOC107743692,LOC107690439,LOC107718284,LOC107601738 coding upstream 203268 13480966 ~ 13489111 (+)
LOC122359191 LOC107709114,LOC107677520,LOC107586244 coding downstream 59249 13752142 ~ 13756092 (+)
LOC122358866 cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 coding downstream 82171 13775064 ~ 13796845 (+)
pak4 pak4,LOC107743662,LOC107664940,LOC107585589,LOC107685053,LOC107592622,LOC107744790 coding downstream 269560 13962453 ~ 13975188 (+)
zgc:152863 LOC107743663,LOC107664952,LOC107585590,LOC107592625,LOC107744814,LOC107685175 coding downstream 283951 13976844 ~ 13981992 (+)
npat LOC107743659,LOC107664943,LOC107585592,LOC107744791,LOC107685055,LOC107592638 coding downstream 302833 13995726 ~ 14003601 (+)
G106350 NA non-coding upstream 6930 13680180 ~ 13685449 (+)
G106276 ube4a,LOC107743704,LOC107718272 non-coding upstream 355702 13335308 ~ 13336677 (+)
LOC122358384 NA non-coding upstream 736572 12945077 ~ 12955807 (+)
G106157 LOC107670963,LOC107731150,LOC107586232 non-coding upstream 912004 12773457 ~ 12780375 (+)
G106171 NA non-coding upstream 920309 12771795 ~ 12772070 (+)
G106370 NA non-coding downstream 106408 13799301 ~ 13811099 (+)
G106381 pafah1b1,lis1a,LOC107664934,LOC107743664,LOC107690414,LOC107744786 non-coding downstream 189228 13882121 ~ 13884081 (+)
G106385 NA non-coding downstream 220686 13913579 ~ 13913790 (+)
G106249 LOC107585585,LOC107743723,LOC107685050,LOC107664929 non-coding downstream 222348 13915241 ~ 13915685 (+)
G106603 NA non-coding downstream 389158 14082051 ~ 14083858 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 843712 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 1594733 12093957 ~ 12097646 (+)
LOC122358755 LOC107729119,LOC107586264,LOC107597546,LOC108425821,LOC107662788 other upstream 1661830 12027555 ~ 12030549 (+)
LOC122358628 NA other upstream 2319688 11370248 ~ 11372691 (+)
G105513 zbtb16b,zbtb16,LOC107597519,LOC107748597,LOC107582577,LOC107701406,LOC107713452,LOC108278332 other upstream 2963984 10721972 ~ 10728395 (+)
G106376 cluh,LOC107685050 other downstream 223680 13916573 ~ 13917262 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other downstream 264304 13957197 ~ 13961807 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other downstream 1220018 14912911 ~ 14928225 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 2013620 15706513 ~ 15712439 (+)
G107107 NA other downstream 2188221 15881114 ~ 15883510 (+)

Expression


Co-expression Network