XLOC_006689


Basic Information

Item Value
gene id XLOC_006689
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30245673 ~ 30250564 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013488
GTCCACCGCATGCTGCGATCTCATTCACACTGTTTTCCTGCACAATCAAGCGGAAGCCCCTGGAGAAGGGCAGGCACAGGCCCACCATCTGCTAACAGCGTCTGGAAGAGCCAGAACGGCTGCCAGGACCCAGGTGACGGAACTGGCCAACACAATCTTACAAATCCTTGCATGGGAAACCTGCAACTGTACCCACTGCCTCTCAGTTCTTCGATTTTATTCAATATCCGATTATTGGAGAAAGAAGAATAGTGGTACATCAGCAGGATGTTGGAACTTGAACAACCTGAATGCAACAGAAAAGGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013488 True 306 lncRNA 0.50 2 30245673 30250564

Neighbor

gene id symbol gene type direction distance location
XLOC_006688 ppa1b coding downstream 83989 30152217 ~ 30161684 (-)
XLOC_006687 sar1ab coding downstream 95081 30144937 ~ 30150592 (-)
XLOC_006686 tysnd1 coding downstream 102546 30135675 ~ 30143127 (-)
XLOC_006685 trmt2b coding downstream 210919 30033036 ~ 30034754 (-)
XLOC_006684 scdb coding downstream 217570 30007554 ~ 30028103 (-)
XLOC_006690 NA coding upstream 298845 30549409 ~ 30551509 (-)
XLOC_006691 NA coding upstream 318003 30568567 ~ 30571143 (-)
XLOC_006692 zcchc24 coding upstream 328696 30579260 ~ 30645965 (-)
XLOC_006693 CT025887.1 coding upstream 381541 30632105 ~ 30632219 (-)
XLOC_006694 si:dkey-275b16.2 coding upstream 404608 30655172 ~ 30662403 (-)
XLOC_006471 BX537274.2 misc downstream 19980768 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 29419448 825904 ~ 826225 (-)
XLOC_006682 NA non-coding downstream 260171 29984877 ~ 29985502 (-)
XLOC_006680 NA non-coding downstream 302711 29937395 ~ 29942962 (-)
XLOC_006679 NA non-coding downstream 442664 29709345 ~ 29803009 (-)
XLOC_006678 NA non-coding downstream 543732 29506613 ~ 29701941 (-)
XLOC_006672 NA non-coding downstream 1015738 29224992 ~ 29229935 (-)
XLOC_006698 NA non-coding upstream 558399 30808963 ~ 30812183 (-)
XLOC_006699 CR762493.2 non-coding upstream 604755 30855319 ~ 30872439 (-)

Expression


Co-expression Network