G106898


Basic Information

Item Value
gene id G106898
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15397722 ~ 15482672 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU157909
aatttttttttttttttttttttttttttccattattaatacatataccTTTATTTTATCTCTAATAATTCATATATGTATTTGTCCTATACATATTTTTCTCTTAACAGTCTCGAAGACATACATAGATCAAATTTAGACTTTATAAAGTACAATAGATTTTCAATACTTTGATAGACAGAATAGTCAATTTTGCTGAGAAAGAAGAGGAAAGGTCAGCACTGGACTgaagcgcgcgcacacacacgcacgcgcacacgctctcacacacagatgcacaatATAGACTCACGTCTAcggcatgcacacacacacttatggaACTGATCATGGCTTATTCTCTACCTCGATGCACAGCTCACACATGTCAGTTCGACAGAGAAATCGACGTCCTCACATTTGCCCACTCTACGAATTCAACGAGTCAGCACAGAACGCCGGACCACACGAACAGCAAAACTCACAAAGTACACATGCACATACTTAGATGTCCAGTCACACCTTCTTTTCATGAAACAAGTCTTGAGGATCAAGGCTGAAGCATTTGTAACAAGCACATTAGTATTTGGTTTCTGCTACTTAGTGTAACTCACAtaaagaaatatgtaaaaaataaatgttaaacccCCCCACTGACATTGAGGAACATGCTAGTGGTCAATCaatattgttttttggttttttttcttagacTTTTACATTTGGTCACCCCAGTCCTGAATATTTGGTCCCATTCTTGTAAATGCTACATGTCAATGGTAACTGGGTAAGCAGACAAAGAGTTCCagttgcaaataaacaaaataagcattatgcgaatgaaatacaaatattccacaaataaatacacatacgcCAAACAATTGGTACATATCTTCCAAATGTAGGCTAAACACTTAATATCTGTTACGTATACGGGCATGGTGGTcaaagacgcacacacacacacatatccactcacacacacatacaaacctgtgcaaaaaacataaaaaatgtatttgggcCCTTGCTTGTCTCATAAAAACATTCTGTTACATTCCTACTTTTACCCTTTCCacatctgaaatgtaaaataaaaattatttaaacatttaacaaaaaaaagaaagaaaagaaaatatagtcACTATTTGGAACCACAAACAGCTTCTTTGAAGTCATACTTACAAATttctataaaaacaataaacaaaaaaaataatttttggccTTATATAAGTGTACATGTAAAATATACCTGAAATTGGTCACAAAACCACAATATAACAatctttatgtatttagttacaATTTAAGGAAAAAGAAATATCGTAGAAAAGCAATCTATATAAATTTTCATAAAGTAAACTGAACCACTTCTGCGTCCATTCCTGTTCTAATCCCAAACTTCACTAAACAGATTTTTCAAAGTTTGGAGTTGGTGAGATTTTTTAACGTTACATGATCTTTCAGATATCAATCTGATATCAACACTGGTTatggtaatattaattaactacatgtactcaCTAGGGTTAGGATTATGGTGACTTGCattgaattatgcataatatattgttattataatagtaagtggtgttattataatataaacgTGTAACAACTAcaacttaaaatgaagtgttactgAAACAATACTTATTaccaatgttgaaaactgtGTAAACTAAATAGtaggttcaaaagaacagcatttatatgaaagtGTAAAGTTCTTTACTGCCACCTTTGATGGTAACGTATCCTTGCTGATTAAAAGTagtaattttattcaaaaaacatcttactgaccccaaacttttcaacATTATTGTACatgagctatatatatatatatatatatatatatatatataattttataatttttatggAGATCTAAAATGAACAATAGAAGGACAAAACGCAGTCAGTAACTCTTATGAGCACTGACAGTGGTCACACATGGACGGcaagaataagaataaaacaatGGCTGTATTTCGGAGGCCTGGCCTCACCGTCACACAATACAGGTAGCAGACTCCTCTGGGGTGAGGTGTGATGGGAGGTCGGTCGAGGCCCTTACAGGAGACACGGGTCCCCTGCGTTTGTGCTACATGTCCAGCAGAAGAGGAAATGTGTCACACGGCGTTGGTGATGACAATTGTGTCTCTCTGAGGGCCGCTGGACCCCGGAGCCTCAGGTGTAATGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157909 True 2198 lncRNA 0.35 2 15397722 15482672

Neighbor

gene id symbol gene type direction distance location
slc43a2a slc43a2,LOC107548581,LOC107685082,LOC107589710,LOC107669718 coding upstream 3633 15374883 ~ 15394089 (+)
si:dkey-118k5.3 LOC107743635,LOC107548579,LOC107756915,LOC107685081,LOC107589709 coding upstream 23724 15368087 ~ 15373998 (+)
myo1cb myo1c,LOC107756890,LOC107743634,LOC107685083 coding upstream 29956 15329872 ~ 15367766 (+)
vtna LOC107548575,LOC107669719,LOC107685077,LOC107589740 coding upstream 98439 15294232 ~ 15299283 (+)
slc46a1 slc46a1,LOC107548560,LOC107669722,LOC107743641,LOC107589753,LOC107685182,LOC107757459 coding upstream 110354 15282512 ~ 15287368 (+)
nova2 nova2,LOC107669728,LOC107589717,LOC107685091,LOC107756760,LOC107548550,LOC103039352,LOC108440380,LOC108277822,LOC104927796,LOC100701682 coding downstream 33432 15516104 ~ 15567549 (+)
LOC122359367 LOC107669715,LOC107548559,LOC107743735,LOC107757374,LOC107685158,LOC107589739 coding downstream 141544 15624216 ~ 15636880 (+)
LOC122358640 cryba1b,LOC107581934,LOC107731981,LOC107713158,LOC107587221,LOC107704801,LOC107675182 coding downstream 161891 15644563 ~ 15647849 (+)
LOC122358489 LOC107756729,LOC107589721,LOC107685095 coding downstream 176316 15658988 ~ 15661655 (+)
gipr gipr,LOC107548593,LOC107714193,LOC107685094,LOC107756746 coding downstream 318057 15800729 ~ 15819146 (+)
G106873 sarm1,LOC107548548,LOC107669752,LOC107743642,LOC107685076,LOC107756984 non-coding upstream 106559 15290829 ~ 15291163 (+)
G106872 sarm1,LOC107743642,LOC107669752,LOC107548548,LOC107685076,LOC107756984 non-coding upstream 107236 15290156 ~ 15290486 (+)
G106863 NA non-coding upstream 151908 15245605 ~ 15245814 (+)
G106860 NA non-coding upstream 158010 15239383 ~ 15239712 (+)
G106859 NA non-coding upstream 158776 15238617 ~ 15238946 (+)
G106924 NA non-coding downstream 19886 15502558 ~ 15571162 (+)
G106926 NA non-coding downstream 27645 15510317 ~ 15511110 (+)
G106941 NA non-coding downstream 154502 15637174 ~ 15638029 (+)
G107113 NA non-coding downstream 411461 15894133 ~ 15894624 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding downstream 517543 16000215 ~ 16002131 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 469497 14912911 ~ 14928225 (+)
aifm4 aifm4,LOC107585620,LOC107685174,LOC107664913,LOC107743746 other upstream 1435915 13957197 ~ 13961807 (+)
G106376 cluh,LOC107685050 other upstream 1480460 13916573 ~ 13917262 (+)
spa17 spa17,nrgnb,LOC107709112,LOC107696004,LOC107586300,LOC108278372,LOC107601687,LOC107657238,LOC107717271 other upstream 2549055 12837582 ~ 12848667 (+)
tnfaip1 tnfaip1,LOC107586309,LOC107729096,LOC107662792,LOC107657549,LOC107597551,LOC107728221,LOC108425816 other upstream 3300076 12093957 ~ 12097646 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other downstream 223841 15706513 ~ 15712439 (+)
G107107 NA other downstream 398442 15881114 ~ 15883510 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other downstream 522197 16004869 ~ 16043265 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other downstream 607085 16089757 ~ 16236341 (+)
lyrm9 lyrm9,LOC107756492 other downstream 1030636 16513308 ~ 16514221 (+)

Expression


Co-expression Network