lyrm9 (lyrm9,LOC107756492)


Basic Information

Item Value
gene id lyrm9
gene name lyrm9,LOC107756492
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16513308 ~ 16514221 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158422
TCCACTGTTATCCTTCACCTTTATCTCCTAAGTCAAACTGCGTGCATGTGACCGAGAGTTTCACGTCTTATTATGGATAATATGGAACTCGAACTTTCCCAGATATACTCAATATCACTGTAGTGTTGAAACTCTGCGAGCAAAGTTAAAAAGGTCATCCTTTTAGGAAAAAGTGCTCAACATGCCTCCTCCTCCCCTGGCGGGCGCTGAGCTGATCCGCACGCCGCTGCAGCTCTACCGCTATCTGCTGCGCTGCTGCAAACTCCTGCCAACGGCAGCCATGCAGAAACACTACCAGCACGCCATCAGACAGagctATAACAGTCACGTGGATGAAGATGATGCAGAAAGGATCCAGATGATCATTCAGAGAGCCATATCTGATGCCGACTgggttttaaataaaTATGCTAAAAAGAAGTGACCGCCGAGCGGAAATGTTCGTCCAGCTGCCTCAGAACTGCAAAGGTCATGCACAGACTGCTAAACACCTCATAGTGCAACTGTACAACGCCGTGAAATCCATATAAACTCCATCCACGTAAACGTTATCAAGTATAACAATTAGATGATTTTTCCTTGAAAAGCTTTTGTGGGAGCTTTACCAATGCGTGCTTATGTTCTGACAAGTCATAGACCTACATTTGCAC
>XM_043258240.1
ATCAGGAAGTCATCCACTGTTATCCTTCACCTTTATCTCCTAAGTCAAACTGCGTGCATGTGACCGAGAGTTTCACGTCTTATTATGGATAATATGGAACTCGAACTTTCCCAGATATACTCAATATCACTGTAGTGTTGAAACTCTGCGAGCAAAGTTAAAAAGGTCATCCTTTTAGGAAAAAGTGCTCAACATGCCTCCTCCTCCCCTGGCGGGCGCTGAGCTGATCCGCACGCCGCTGCAGCTCTACCGCTATCTGCTGCGCTGCTGCAAACTCCTGCCAACGGCAGCCATGCAGAAACACTACCAGCACGCCATCAGACAGagctATAACAGTCACGTGGATGAAGATGATGCAGAAAGGATCCAGATGATCATTCAGAGAGCCATATCTGATGCCGACTgggttttaaataaaTATGCTAAAAAGAAGTGACCGCCGAGCGGAAATGTTCGTCCAGCTGCCTCAGAACTGCAAAGGTCATGCACAGACTGCTAAACACCTCATAGTGCAACTGTACAACGCCGTGAAATCCATATAAACTCCATCCACGTAAACGTTATCAAGTATAACAATTAGATGATTTTTCCTTGAAAAGCTTTTGTGGGAGCTTTACCAATGCGTGCTTATGTTCTGACAAGTCATAGACCTACATTTGCACATTgcgtttaatgtttattttgtactttttaatgaaatgttaataaatacatttaatattg

Function

symbol description
lyrm9 Orthologous to human LYRM9 (LYR motif containing 9).

NR:

description
PREDICTED: LYR motif-containing protein 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158422 False 650 TUCP 0.46 3 16513320 16514160
XM_043258240.1 True 723 mRNA 0.43 3 16513308 16514221

Neighbor

gene id symbol gene type direction distance location
nlk2 nlk2,nlk,LOC106581270 coding upstream 5220 16442906 ~ 16508088 (+)
nufip2 nufip2,LOC107714169,LOC107666195,LOC107592914,LOC107756500,LOC107587528,LOC107682614 coding upstream 79423 16423297 ~ 16433885 (+)
LOC122358452 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding upstream 264678 16244788 ~ 16248630 (+)
LOC122359064 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107589737,LOC107756533 coding upstream 272952 16230809 ~ 16240356 (+)
zgc:153372 zgc:153372,LOC107682590,LOC107587555,LOC107757291 coding upstream 385665 16124547 ~ 16127643 (+)
nos2b nos2,LOC107588374,LOC107666185,LOC107756441 coding downstream 127 16514348 ~ 16525658 (+)
mrps23 LOC107746708,LOC107588353,LOC107666184 coding downstream 11504 16525725 ~ 16528161 (+)
LOC122359007 NA coding downstream 291203 16805424 ~ 16807691 (+)
omgb LOC107587445,LOC107672106,LOC107746657,LOC107592923,LOC107682744,LOC107756362 coding downstream 295016 16809237 ~ 16816847 (+)
LOC122359144 LOC107588342,LOC107672102,LOC107683437,LOC107757408,LOC107592926,LOC556987,LOC108425804 coding downstream 443938 16958159 ~ 16959238 (+)
LOC122358549 NA non-coding upstream 155686 16336814 ~ 16357622 (+)
G107232 NA non-coding upstream 168653 16344382 ~ 16344655 (+)
G107145 NA non-coding upstream 346303 16139813 ~ 16167005 (+)
G107141 NA non-coding upstream 443567 16069484 ~ 16069741 (+)
G107136 LOC107588392,LOC107666206,LOC107756564,LOC107682478,LOC107589735 non-coding upstream 511177 16000215 ~ 16002131 (+)
LOC122358872 NA non-coding downstream 15059 16529280 ~ 16578656 (+)
LOC122359009 NA non-coding downstream 268858 16783079 ~ 16787674 (+)
G107305 NA non-coding downstream 344014 16858235 ~ 16859096 (+)
G107307 NA non-coding downstream 345483 16859704 ~ 16860627 (+)
G107308 NA non-coding downstream 346549 16860770 ~ 16860988 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 276967 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 470043 16004869 ~ 16043265 (+)
G107107 NA other upstream 629798 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 800869 15706513 ~ 15712439 (+)
tbx4 tbx4,LOC107548556,LOC107664909,LOC107757041,LOC107685071,LOC107743740,LOC107589698,LOC106612866 other upstream 1585083 14912911 ~ 14928225 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 1275624 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 1317851 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 1530796 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 2242122 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 2245361 18759582 ~ 18760497 (+)

Expression


Co-expression Network