G107272 (LOC107592917,LOC107757278,LOC107682697)


Basic Information

Item Value
gene id G107272
gene name LOC107592917,LOC107757278,LOC107682697
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16880657 ~ 16882321 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158445
aaatgcaatattattcAGTGTTGAACTTACTTGTTGGGCGTAGGGTCATCGATGCGGTTGGCCAGTTGGCTCTGGCTCTTGCTGCGTGTGAGGGTGATGCTGGGCAGGAGGTTGAGCAGCTTACGGGATGGAGGTGGTGGAGTTCGTGGGGGCTTTAGTTTGCCATACCTTTTGGATGGCGGTGTGGCTGGAGGGGTGGACAGCAGCCCAGGGTTGCAGCGGTTCAGCTGCGCGAAGGATGAAAAAGGGTCCGCCAGCCCGTCACAGTGAGGGTGGACGATCGTAGGGAAGTCCGTTGAGGGTAGAGCAGAAACAGAGACGCATGAACGAAGGGCAGGCAGGGCAGAAGGAGGGGGCCAGCCGGTTGGGCTGGGACTGTAAGACTGATGTGCACGCATAGAACAAGACAGAGGGTCAACAGAGGTACTGTCACGGTGAGTGGGCTCTGCTATCCACGGGATGCCCTCTTTCTTAAGTGCTCCACCTGTCAGTAGCGCTCTTCAGACAGGAGAGGGCAGCGGTGATGCGGGAACACTCCTCACTGCTAGAGCCCAGTCTTTTCATGGTGTCTTCCACCTGCACACTGGACATCTGCAGCAGAGCATCCAGAGACAGCTTCTCAGGCACCGCCTGGAAGACAAAAACACACTAAT

Function

NR:

description
PREDICTED: kinase suppressor of Ras 1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158445 True 653 lncRNA 0.56 2 16880657 16882321

Neighbor

gene id symbol gene type direction distance location
omgb LOC107587445,LOC107672106,LOC107746657,LOC107592923,LOC107682744,LOC107756362 coding upstream 63810 16809237 ~ 16816847 (+)
LOC122359007 NA coding upstream 72966 16805424 ~ 16807691 (+)
mrps23 LOC107746708,LOC107588353,LOC107666184 coding upstream 352496 16525725 ~ 16528161 (+)
nos2b nos2,LOC107588374,LOC107666185,LOC107756441 coding upstream 354999 16514348 ~ 16525658 (+)
nlk2 nlk2,nlk,LOC106581270 coding upstream 372569 16442906 ~ 16508088 (+)
LOC122359144 LOC107588342,LOC107672102,LOC107683437,LOC107757408,LOC107592926,LOC556987,LOC108425804 coding downstream 75838 16958159 ~ 16959238 (+)
LOC122358372 or116-1,LOC107683394,LOC107757262,LOC107592963,LOC107757255,LOC107592965,LOC107683395 coding downstream 84112 16966433 ~ 16967368 (+)
LOC122358381 nlk1,nlk,LOC107678874,LOC107582859,LOC107754939,LOC107684639,LOC108410603 coding downstream 109474 16991795 ~ 17017279 (+)
LOC122359040 NA coding downstream 144558 17026879 ~ 17028715 (+)
LOC122359039 LOC107587445,LOC107672106,LOC107746657,LOC107592923,LOC107682744,LOC107756362 coding downstream 148752 17031073 ~ 17037925 (+)
G107309 NA non-coding upstream 19180 16861187 ~ 16861477 (+)
G107308 NA non-coding upstream 19669 16860770 ~ 16860988 (+)
G107307 NA non-coding upstream 20030 16859704 ~ 16860627 (+)
G107305 NA non-coding upstream 21561 16858235 ~ 16859096 (+)
LOC122359009 NA non-coding upstream 92983 16783079 ~ 16787674 (+)
G107424 NA non-coding downstream 204338 17086659 ~ 17090973 (+)
G107427 NA non-coding downstream 222746 17105067 ~ 17105346 (+)
G107437 NA non-coding downstream 313182 17195503 ~ 17195885 (+)
G107438 NA non-coding downstream 313833 17196154 ~ 17198330 (+)
G107440 NA non-coding downstream 316134 17198455 ~ 17199613 (+)
lyrm9 lyrm9,LOC107756492 other upstream 366436 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 644316 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 837392 16004869 ~ 16043265 (+)
G107107 NA other upstream 997147 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 1168218 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 907524 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 949751 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 1162696 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 1874022 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 1877261 18759582 ~ 18760497 (+)

Expression


Co-expression Network