G107427


Basic Information

Item Value
gene id G107427
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17105067 ~ 17105346 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158666
GGGAGTCCTGCGTGGAGGACGACAGGCTGCTCTGACTCCCTTCTGTGTCCATTCCCGTGTCCCTCTGTTGCCCGGACTGTGAGCCGAACGGGAGCCAGGAGTCTCCAACTCAAGAGCGGGTGGCCCGAGGGGGTGGGGGAGGGAGGGCCCGTCTGGAGGAGGCCGGGCCAGGCGTGGTTTGCGCACACACCGAGGCGCCGCCTCCCGTTTGACTTTTCCCGGACTCTCGTAGTTCGCCCCGCCCCCTCTTCCTCCCCGGCCCCGCCCGCTTTCATCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158666 True 280 lncRNA 0.69 1 17105067 17105346

Neighbor

gene id symbol gene type direction distance location
LOC122359259 NA coding upstream 16541 17086908 ~ 17088526 (+)
LOC122359039 LOC107587445,LOC107672106,LOC107746657,LOC107592923,LOC107682744,LOC107756362 coding upstream 67142 17031073 ~ 17037925 (+)
LOC122359040 NA coding upstream 76352 17026879 ~ 17028715 (+)
LOC122358381 nlk1,nlk,LOC107678874,LOC107582859,LOC107754939,LOC107684639,LOC108410603 coding upstream 87788 16991795 ~ 17017279 (+)
LOC122358372 or116-1,LOC107683394,LOC107757262,LOC107592963,LOC107757255,LOC107592965,LOC107683395 coding upstream 137699 16966433 ~ 16967368 (+)
LOC122358375 LOC107672077,LOC107672078,LOC107592966,LOC107757247,LOC107588093 coding downstream 19476 17124822 ~ 17125802 (+)
or40a1 LOC107559006,LOC107683439 coding downstream 54684 17160030 ~ 17161016 (+)
LOC122359375 LOC107672087,LOC107746675,LOC107683442 coding downstream 62419 17167765 ~ 17168715 (+)
LOC122358664 LOC107588000,LOC107746701,LOC107672094,LOC107587345 coding downstream 105194 17210540 ~ 17211529 (+)
LOC122358512 LOC107588000,LOC107672094,LOC107746701,LOC107587345 coding downstream 120765 17226111 ~ 17227094 (+)
G107424 NA non-coding upstream 14094 17086659 ~ 17090973 (+)
G107272 LOC107592917,LOC107757278,LOC107682697 non-coding upstream 222746 16880657 ~ 16882321 (+)
G107309 NA non-coding upstream 243590 16861187 ~ 16861477 (+)
G107308 NA non-coding upstream 244079 16860770 ~ 16860988 (+)
G107307 NA non-coding upstream 244440 16859704 ~ 16860627 (+)
G107437 NA non-coding downstream 90157 17195503 ~ 17195885 (+)
G107438 NA non-coding downstream 90808 17196154 ~ 17198330 (+)
G107440 NA non-coding downstream 93109 17198455 ~ 17199613 (+)
G107443 NA non-coding downstream 95062 17200408 ~ 17200937 (+)
G107447 NA non-coding downstream 203999 17309345 ~ 17314661 (+)
lyrm9 lyrm9,LOC107756492 other upstream 590846 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 868726 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1061802 16004869 ~ 16043265 (+)
G107107 NA other upstream 1221557 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 1392628 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 684499 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 726726 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 939671 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 1650997 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 1654236 18759582 ~ 18760497 (+)

Expression


Co-expression Network