G107447


Basic Information

Item Value
gene id G107447
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17309345 ~ 17314661 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158701
TGTCCGGTTGCTTGGGAGGTCCTTCCTGTTTACTCTGAGGACGGTGTTGGATTGAATTGAAACGTGGATCGTGTTTGTTAGAGGTGGATGCTAGTGCCGTTGGAGCTGGTGCTGTGCTCTTACAGGAAGATAAAGAAGgTTTCTTTATTGGTTCGCCTGACCATCTGGGAGGATCTGGATGTCCAATCAGGAGCCGCGATGCAGAATTTAAATGGAATTGGTGTGCATGTTTCGGAAGGGCGGTGGAGTTGTGGCTAGCTTCACCGTACCTCATTTGTGCTGTGGTTTTCTTTTGAGTACTGTAATCGAACAAACTGAGATGAGTTAATTTAATCGAGAGAAGAGGGAGTTAGTGATGTCACGTGACGTACATTTCCCCAACACGTAGGTGTACCTATGTTTAACTCACTAGTTT

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process
GO:0032501 multicellular organismal process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU158701 True 415 lncRNA 0.46 3 17309345 17314661

Neighbor

gene id symbol gene type direction distance location
LOC122358385 NA coding upstream 12411 17295999 ~ 17296934 (+)
LOC122359229 LOC107683442,LOC107746667,LOC107757158,LOC107683403,LOC107746666,LOC107587991 coding upstream 46987 17261395 ~ 17262358 (+)
LOC122359433 LOC107746667,LOC107746666,LOC107757158,LOC107683403,LOC107559004,LOC107587991,LOC107668350,LOC107588291 coding upstream 49507 17258873 ~ 17259838 (+)
LOC122359423 or103-2,or103-5,LOC107746667,LOC107746666,LOC107587991,LOC107668350,LOC107588291,LOC107757158 coding upstream 55987 17252396 ~ 17253358 (+)
LOC122359258 LOC107672094,LOC107588000,LOC107587345,LOC107746701 coding upstream 69000 17239332 ~ 17240345 (+)
LOC122358671 LOC107672094,LOC107588000,LOC107746701,LOC107587345 coding downstream 54437 17369098 ~ 17370108 (+)
LOC122358673 LOC107588000,LOC107746701,LOC107672094,LOC107587345 coding downstream 58482 17373143 ~ 17374153 (+)
LOC122359272 LOC107672094,LOC107588000,LOC107587345,LOC107746701 coding downstream 72363 17387024 ~ 17388040 (+)
LOC122359274 LOC107672094,LOC107588000,LOC107587345,LOC107746701 coding downstream 79476 17394137 ~ 17395152 (+)
LOC122359275 LOC107672094,LOC107588000,LOC107587345,LOC107746701 coding downstream 86073 17400734 ~ 17401747 (+)
G107443 NA non-coding upstream 108408 17200408 ~ 17200937 (+)
G107440 NA non-coding upstream 109732 17198455 ~ 17199613 (+)
G107438 NA non-coding upstream 111015 17196154 ~ 17198330 (+)
G107437 NA non-coding upstream 113460 17195503 ~ 17195885 (+)
G107427 NA non-coding upstream 203999 17105067 ~ 17105346 (+)
G107450 LOC108433790 non-coding downstream 139633 17454294 ~ 17457686 (+)
G107468 NA non-coding downstream 165187 17479848 ~ 17480048 (+)
G107477 NA non-coding downstream 251532 17566193 ~ 17566876 (+)
G107547 NA non-coding downstream 501471 17816132 ~ 17816825 (+)
LOC122358482 NA non-coding downstream 543246 17857907 ~ 17859804 (+)
lyrm9 lyrm9,LOC107756492 other upstream 795124 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 1073004 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1266080 16004869 ~ 16043265 (+)
G107107 NA other upstream 1425835 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 1596906 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 475184 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 517411 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 730356 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 1441682 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 1444921 18759582 ~ 18760497 (+)

Expression


Co-expression Network