G107477


Basic Information

Item Value
gene id G107477
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17566193 ~ 17566876 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158739
GTGTATACACGTATTaagtgtcaaaaaataaatcccAACAAATGTTATGCTGTTTTCTCTGCAAACAAAGTATTACGCTACTTAAGCATCTAAGACGTACGTTTCTGGATGTAAAATAGCGCTGGCTGGCCTTAATTAGGCTACATccttcatgtatttattttaattggtgGACAACTGAGAATGTTTTATATGATAACCACTCACGGTTGTTAATGGCAACATACCCTGCATCGATTTCGCTTTTTCACACCAACCCGAGAACGGTTAAGTGGCGCCATCTTGTGGATTAGAACGGTTGCTACGGTTACCGACTGCAGAAAGGCCTCGAACACTCACGGtggtatttttatcattatggggactctccataggcataatgatttttatactacaaactaaaataattgtatCCCCCTAACCTCGCCCTAAACCCACACGCgcacctttttttaaatctagaaaAGACTCGGACTCAGTTGAACGCAGATCTGATGGACACTAAAACGTTGGAtgagaatataaaaatgtaagttccacgacagtgtttttaatatgttatttaattagtCCAAAGCAATCTAATTTATAAGTGTTAGCCTACTTAATGTTCGtcttattactttttttctgtttgtttagtgTGATGGACattggtcacagaaataaaaatatttaaacgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158739 True 684 lncRNA 0.37 1 17566193 17566876

Neighbor

gene id symbol gene type direction distance location
rxfp2b rxfp2,rxfp2b,LOC107558987,LOC107683406 coding upstream 122 17549776 ~ 17566071 (+)
b3glcta b3glct,b3glcta,LOC107756277,LOC107682850 coding upstream 16551 17489450 ~ 17549642 (+)
wdr95 wdr95,LOC107746697,LOC107704726,LOC107587932 coding upstream 87992 17463303 ~ 17478201 (+)
LOC122358547 tex26 coding upstream 103070 17460427 ~ 17463123 (+)
LOC122358675 LOC107757141,LOC107558992 coding upstream 130594 17434652 ~ 17435599 (+)
frya fry,frya,LOC107559014 coding downstream 5549 17572425 ~ 17623054 (+)
brca2 brca2,LOC107752535 coding downstream 56858 17623734 ~ 17635824 (+)
dchs1a dchs1a,LOC107587256,LOC107558986,LOC107683408,LOC108433795,LOC108278281,LOC107704701 coding downstream 94045 17660921 ~ 17750367 (+)
arfip2a arfip2a,LOC107587234,LOC107704786,LOC107559011,LOC107752500,LOC107682914 coding downstream 202328 17769204 ~ 17777553 (+)
fhdc4 LOC107752494,LOC107704784,LOC107682937,LOC107559008,LOC107587915 coding downstream 211721 17778597 ~ 17787869 (+)
G107468 NA non-coding upstream 86145 17479848 ~ 17480048 (+)
G107450 LOC108433790 non-coding upstream 108507 17454294 ~ 17457686 (+)
G107447 NA non-coding upstream 251532 17309345 ~ 17314661 (+)
G107443 NA non-coding upstream 365256 17200408 ~ 17200937 (+)
G107440 NA non-coding upstream 366580 17198455 ~ 17199613 (+)
G107547 NA non-coding downstream 249256 17816132 ~ 17816825 (+)
LOC122358482 NA non-coding downstream 291031 17857907 ~ 17859804 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding downstream 487392 18054268 ~ 18072232 (+)
LOC122358786 NA non-coding downstream 875819 18442695 ~ 18443413 (+)
G107688 NA non-coding downstream 958729 18525605 ~ 18526233 (+)
lyrm9 lyrm9,LOC107756492 other upstream 1051972 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 1329852 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1522928 16004869 ~ 16043265 (+)
G107107 NA other upstream 1682683 15881114 ~ 15883510 (+)
G106937 eml2,LOC107669753,LOC107743713,LOC107548590,LOC107685092 other upstream 1853754 15706513 ~ 15712439 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other downstream 222969 17789845 ~ 17811203 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 265196 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 478141 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 1189467 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 1192706 18759582 ~ 18760497 (+)

Expression


Co-expression Network