G107547


Basic Information

Item Value
gene id G107547
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 17816132 ~ 17816825 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU158832
tcagcgtgactaattttgtttatatcattattttaaacgACATGTAACCGCTAGATGGCGCTACTTACCAGTCTGAAGAACATCGGTGACTACTGTGGTGTAGTACATAAAAACGTCATCGGTGCTTGAGTTGAGAATTTTGATCACATAGACTATAGAAAACAGAcgacatttaaatgcaaatataagtATATGAGACTTGTCAACATTACAACATTAGAGTTTAGTTTCTCACCATAGTCAACAACAGGACTGAAACATGCATAGCTAGTCCGGGTGTTTTGTTTCATATCCTTGCTGAAGTTTGGAAATCATGGGGCTTTTGTGAGGGGCTGTATAGAATATACCGCATCTCTTTTCTGTGTAACACATTTGATAAAAGGCATTAGTCAGTGTTCAGCACTCAGGTTGTCATCAAGCGATTGGTTCATAGCGTTTGATGACCTGGGTTGTAATAGTCATAGATGACCGCAGAAGCGGGCTGAACAAGACCCATGGGAACAACCTGCTCAGCGCCAAACTGAAGGCATTCCTCGCTTTCAGTGATCTGTTGACATGAA

Function

GO:

id name namespace
GO:0004962 endothelin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158832 True 560 lncRNA 0.41 2 17816132 17816825

Neighbor

gene id symbol gene type direction distance location
fhdc4 LOC107752494,LOC107704784,LOC107682937,LOC107559008,LOC107587915 coding upstream 28263 17778597 ~ 17787869 (+)
arfip2a arfip2a,LOC107587234,LOC107704786,LOC107559011,LOC107752500,LOC107682914 coding upstream 38579 17769204 ~ 17777553 (+)
dchs1a dchs1a,LOC107587256,LOC107558986,LOC107683408,LOC108433795,LOC108278281,LOC107704701 coding upstream 65765 17660921 ~ 17750367 (+)
brca2 brca2,LOC107752535 coding upstream 180308 17623734 ~ 17635824 (+)
frya fry,frya,LOC107559014 coding upstream 193078 17572425 ~ 17623054 (+)
LOC122358680 frem2b,LOC107752721,LOC107683412,LOC107730863,LOC107704782,LOC107582282,LOC108433801 coding downstream 220288 18037113 ~ 18039299 (+)
trpc4b trpc4b,LOC107752869,LOC107704724,LOC107588262,LOC107730855,LOC107683445,LOC108433784 coding downstream 404447 18221272 ~ 18237305 (+)
postnb LOC107704781,LOC107752481,LOC107587216,LOC107730854,LOC107582252,LOC107682985 coding downstream 423824 18240649 ~ 18254051 (+)
spartb spg20,LOC107752446,LOC107683015,LOC107730857 coding downstream 453211 18270036 ~ 18283210 (+)
dclk1b LOC107752421,LOC107704780,LOC108433804,LOC107683036,LOC107730822,LOC107582281 coding downstream 468134 18284959 ~ 18317179 (+)
G107477 NA non-coding upstream 249256 17566193 ~ 17566876 (+)
G107468 NA non-coding upstream 336084 17479848 ~ 17480048 (+)
G107450 LOC108433790 non-coding upstream 358446 17454294 ~ 17457686 (+)
G107447 NA non-coding upstream 501471 17309345 ~ 17314661 (+)
G107443 NA non-coding upstream 615195 17200408 ~ 17200937 (+)
LOC122358482 NA non-coding downstream 41082 17857907 ~ 17859804 (+)
LOC122358481 LOC107575069,LOC107748074,LOC107682967 non-coding downstream 237443 18054268 ~ 18072232 (+)
LOC122358786 NA non-coding downstream 625870 18442695 ~ 18443413 (+)
G107688 NA non-coding downstream 708780 18525605 ~ 18526233 (+)
G107689 NA non-coding downstream 716724 18533549 ~ 18534339 (+)
trim3a trim3a,LOC107587229,LOC107704783,LOC108433799,LOC108278293,LOC103363426 other upstream 4929 17789845 ~ 17811203 (+)
lyrm9 lyrm9,LOC107756492 other upstream 1301911 16513308 ~ 16514221 (+)
G107148 nrip1a,LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 other upstream 1579791 16089757 ~ 16236341 (+)
gdpd5b gdpd5,gdpd5b,LOC107714175,LOC107666190,LOC107682503,LOC107756554 other upstream 1772867 16004869 ~ 16043265 (+)
G107107 NA other upstream 1932622 15881114 ~ 15883510 (+)
G107558 si:dkey-285b23.4,si:dkey-285b23.3,LOC107748074,LOC107559010,LOC107575068,LOC107575069 other downstream 15247 17832072 ~ 18116953 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other downstream 228192 18045017 ~ 18046904 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other downstream 939518 18756343 ~ 18758836 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other downstream 942757 18759582 ~ 18760497 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other downstream 977255 18794080 ~ 18795982 (+)

Expression


Co-expression Network