G107872


Basic Information

Item Value
gene id G107872
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 18947047 ~ 18947385 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU159312
CTAAAGTGTccttaaatgcaacaaaaacctGAGAAAAACATGGTACTTTTGTACCACCatgttaaaatgtacaattaaatttaaatatccttttctaataaataaatataaatacataaaaggtACTTTTGTACACCTACCtttgttaaaaattgtatttaaattacatttaaatttgaatattatttttttaatttaacaaacaaataatttgagattttaaatgcaatattctGCTGTTTTCTGTGCCTCTTTAAAATctcttacagaaaaaaatagggTACTTCTGTACCCCTAGCTTTTGTTACAAATCATACATACcataaaatggaatttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159312 True 339 lncRNA 0.24 1 18947047 18947385

Neighbor

gene id symbol gene type direction distance location
arl4aa arl4aa,LOC107704720,LOC107752852,LOC107588218,LOC107582295 coding upstream 148723 18797439 ~ 18798324 (+)
vwde vwde,LOC107588234,LOC107752288,LOC107683449,LOC107582297 coding upstream 172397 18772258 ~ 18774650 (+)
tmem106ba tmem106b,LOC107704771,LOC107587075,LOC107752274,LOC107582242,LOC107730846,LOC107683194 coding upstream 176653 18766852 ~ 18770394 (+)
LOC122358576 NA coding upstream 212809 18727691 ~ 18734238 (+)
LOC122358577 NA coding upstream 219491 18724523 ~ 18727556 (+)
tspan13a tspan13a,LOC107704717,LOC107752827,LOC107582238,LOC107683454,LOC107730871,LOC107579983 coding downstream 55288 19002673 ~ 19005341 (+)
lta NA coding downstream 88590 19035975 ~ 19040881 (+)
tnfb NA coding downstream 99098 19046483 ~ 19048861 (+)
ppt2a.2 LOC107730851,LOC107683375,LOC107582233,LOC107752135,LOC107704757,LOC107586894 coding downstream 185640 19133025 ~ 19137062 (+)
si:ch73-95l15.5 si:ch73-95l15.5,LOC107752121,LOC107704750,LOC107683319,LOC107730848,LOC107586839,LOC107586854 coding downstream 190741 19138126 ~ 19146425 (+)
G107871 NA non-coding upstream 166 18946537 ~ 18946881 (+)
G107870 NA non-coding upstream 1495 18945273 ~ 18945552 (+)
G107774 etv1 non-coding upstream 108327 18812522 ~ 18838720 (+)
LOC122358548 NA non-coding upstream 111446 18808258 ~ 18835601 (+)
G107752 NA non-coding upstream 200026 18744606 ~ 18747021 (+)
G107873 NA non-coding downstream 333 18947718 ~ 18948058 (+)
G107874 NA non-coding downstream 1010 18948395 ~ 18948615 (+)
G107866 NA non-coding downstream 9435 18956820 ~ 18958775 (+)
G107996 NA non-coding downstream 224502 19171887 ~ 19221052 (+)
G107999 mrpl44 non-coding downstream 269496 19216881 ~ 19218097 (+)
G107777 NA other upstream 103192 18842276 ~ 18843855 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other upstream 151065 18794080 ~ 18795982 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other upstream 186550 18759582 ~ 18760497 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other upstream 188211 18756343 ~ 18758836 (+)
G107574 frem2b,LOC107730863,LOC107587905,LOC107704782,LOC108433801,LOC106520551 other upstream 900143 18045017 ~ 18046904 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other downstream 45960 18993345 ~ 18995991 (+)
si:dkey-262k9.2 LOC107694804,LOC107739770,LOC107755381,LOC107704708,LOC107585797,LOC107694807,LOC107582218 other downstream 773899 19721284 ~ 19774385 (+)
G108245 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 other downstream 1236735 20184120 ~ 20249972 (+)
G108230 hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664 other downstream 1241648 20189033 ~ 20254271 (+)
LOC122359185 LOC107742015,LOC107699248 other downstream 1260785 20208170 ~ 20215479 (+)

Expression


Co-expression Network