G108230 (hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664)


Basic Information

Item Value
gene id G108230
gene name hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 20189033 ~ 20254271 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU159862
ATGGGGCGGTGTTTTCCTCAAGCTATTTAAACCTCCGACTAACCTGGACAGCAACAATTTTCCTTCTTTCTGTTGCGTAACAGGATAACCCCTAACATAATAACCAACCAGTCATACGCTCTGTGTTTTCTgaagcagttttatttattcggtggttatttttttttttacattcatcgCAGAAGAATGGACTTCGACTTGCCTCCTTCTCTTCCGGTGAGCGGTATCCCATGGGAAAGGGTTCTCCCACCGTTATTCCCCAGGTGGAACGGGAAAATCGGACCTTATTCATGGACCCCAACCGAACTTCTAATCCCGGTTTCTGAGCACACCGGAGCAGCACAGGTGACCTGTGATCAGAAGGGATTCACTGTGCAGGTTGATGTAAAACACTTCAGTCCCGAGGAACTGCTGGTAAAAGTTACCGAGATTATGTTGTGGTCGAGGAAAACACGAACAAAAAAAGGACGGCTCAGGACTGGTGACACGTCAGTTTAACCGGAGATACAGGATCCCGAACGGAGTGGACATCACGGCCCTGGAATCAGCCATGTCACCAGAAGGCATGCTGGTGATCTCAGCGCCTCTGACACAAGGAGACAATTCCACAATGTTAAATCACAGCGGACCATgatgtgctcacacacacacacttttttttttggctgttctTCACTGTTTTAGTTCTTAACGTGTTAATGCAAGGCGCTTAAAGCTCCCATCCTCTGGGTTTCTCACCTAAAGCAACGGTAAAGACCAAAACAGACTCACTCCCCCTTGTGGCGGTGGGCTGCTCAATTCCAAACATACTTGATTTCAAGCCAACAAGGAAACCGTATCCCATTTTCTTCACACTTGCTGTCAGTTTAGCACACAGCCAGTAAGAGCGACAAATTTGTCCTGAAGTTAACATCCAAACACGAACCCACGGTCCTGAATTTAGTACGAGAAGTTCAGTTCGTTTTGATAGGCTATGTTGagattgtacatattttaaaaaaagcgatAATTTCAGTGTTAATCTTAACATTTGTGTGATGTACAGTTTGAATgtcaataaatgtaatgtaccACCCTTGATTATTTGCAAAGATCTTTATttagaaaactcaaaaaataaatagtagcaaaaataaacatgataagGAGAAACATAGTGCAACGGTAAACAGGTGCATCAAAGCTGCTGGAGCATCTTATCAACCtcactggaaaataaaaatggaaaaccgATCAGGTAAAAAGTCTAACTTGCATAGAATAATTCTACAGATAAGCTGTAGGTATTCTCACCAAAGTTGTTCCTTCACCCATTTCCTCTGCTGTCTGAGGACCTGCAACAAAGGATCGTCTTCAAACTCCTCCCCATCTGAGTCTGTATGTAAGATTGTGATATCAGGATAAGAGGGGaagaataaatcatttatattatttattacacactATCAAATAATTTGGTGttgtttctttacttttttttgcatagaatgatgcattaaacaaataatatattttaaatgcaataaagagATTTTGACAtcgttacatttttattacaaataaatgttcctTTGTacattctattcatcaaaatatcagaCGTTCTGAATTCAGCTTTGATTATCACAGAAACAAAttctatttaacattttatttgaatagaagttattcaaattgtaatttttcacaaaaattataaataatatttcacaataatactgtttttactgtattttgaccaaataaaagCCAAACCAAATCCaga
>TU159863
ATGGGGCGGTGTTTTCCTCAAGCTATTTAAACCTCCGACTAACCTGGACAGCAACAATTTTCCTTCTTTCTGTTGCGTAACAGGATAACCCCTAACATAATAACCAACCAGTCATACGCTCTGTGTTTTCTgaagcagttttatttattcggtggttatttttttttttacattcatcgCAGAAGAATGGACTTCGACTTGCCTCCTTCTCTTCCGGTGAGCGGTATCCCATGGGAAAGGGTTCTCCCACCGTTATTCCCCAGGTGGAACGGGAAAATCGGACCTTATTCATGGACCCCAACCGAACTTCTAATCCCGGTTTCTGAGCACACCGGAGCAGCACAGGTGACCTGTGATCAGAAGGGATTCACTGTGCAGGTTGATGTAAAACACTTCAGTCCCGAGGAACTGCTGGTAAAAGTTACCGAGATTATGTTGTGGTCGAGGAAAACACGAACAAAAAAAGGACGGCTCAGGACTGGTGACACGTCAGTTTAACCGGAGATACAGGATCCCGAACGGAGTGGACATCACGGCCCTGGAATCAGCCATGTCACCAGAAGGCATGCTGGTGATCTCAGCGCCTCTGACACAAGGAGACAATTCCACAATGTTAAATCACAGCGGACCATgatgtgctcacacacacacacacacacacttttttttttggctgttctTCACTGTTTTAGTTCTTAACGTGTTAATGCAAGGCGCTTAAAGCTCCCATCCTCTGGGTTTCTCACCTAAAGCAACGGTAAAGACCAAAACAGACTCACTCCCCCTTGTGGCGGTGGGCTGCTCAATTCCAAACATACTTGATTTCAAGCCAACAAGGAAACCGTATCCCATTTTCTTCACACTTGCTGTCAGTTTAGCACACAGCCAGTAAGAGCGACAAATTTGTCCTGAAGTTAACATCCAAACACGAACCCACGGTCCTGAATTTAGTACGAGAAGTTCAGTTCGTTTTGATAGGCTATGTTGagattgtacatattttaaaaaaagcgatAATTTCAGTGTTAATCTTAACATTTGTGTGATGTACAGTTTGAATgtcaataaatgtaatgtaccACCCTTGATTATTT
>TU159872
ATGGGGCGGTGTTTTCCTCAAGCTATTTAAACCTCCGACTAACCTGGACAGCAACAATTTTCCTTCTTTCTGTTGCGTAACAGGATAACCCCTAACATAATAACCAACCAGTCATACGCTCTGTGTTTTCTgaagcagttttatttattcggtggttatttttttttttacattcatcgCAGAAGAATGGACTTCGACTTGCCTCCTTCTCTTCCGGTGAGCGGTATCCCATGGGAAAGGGTTCTCCCACCGTTATTCCCCAGGTGGAACGGGAAAATCGGACCTTATTCATGGACCCCAACCGAACTTCTAATCCCGGTTTCTGAGCACACCGGAGCAGCACAGGTGACCTGTGATCAGAAGGGATTCACTGTGCAGGTTGATGTAAAACACTTCAGTCCCGAGGAACTGCTGGTAAAAGTTACCGAGATTATGTTGTGGTCGAGGAAAACACGAACAAAAAAAGGACGGCTCAGGACTGGTGACACGTCAGTTTAACCGGAGAGCACACCGGAGCAGCACAGGTGACCTGTGATCAGAAGGGATTCACTGTGCAGGTTGATGTAAAACACTTCAGTCCCGAGGAACTGCTGGTAAAAGTTACCGGAGATTATGTTGTGGTCGAGGGAAAACACGAACAAAAAAAGGACGGCTCAGGACTGGTGACACGTCAGTTTAACCGGAGATACAGGATCCCGAACGGAGTGGACATCACGGCCCTGGAATCAGCCATGTCACCAGAAGGCATGCTGGTGATCTCAGCGCCTCTGACACAAGGAGACAATTCCACAATGTTAAATCACAGCGGACCATgatgtgctcacacacacacacttttttttttggctgttctTCACTGTTTTAGTTCTTAACGTGTTAATGCAAGGCGCTTAAAGCTCCCATCCTCTGGGTTTCTCACCTAAAGCAACGGTAAAGACCAAAACAGACTCACTCCCCCTTGTGGCGGTGGGCTGCTCAATTCCAAACATACTTGATTTCAAGCCAACAAGGAAACCGTATCCCATTTTCTTCACACTTGCTGTCAGTTTAGCACACAGCCAGTAAGAGCGACAAATTTGTCCTGAAGTTAACATCCAAACACGAACCCACGGTCCTGAATTTAGTACGAGAAGTTCAGTTCGTTTTGATAGGCTATGTTGagattgtacatattttaaaaaaagcgatAATTTCAGTGTTAATCTTAACATTTGTGTGATGTACAGTTTGAATgtcaataaatgtaatgtaccACCCTTGATTATTTGCAAAGATCTTTATttagaaaactcaaaaaataaatagtagcaaaaataaacatgataagGAGAAACATAGTGCAACGGTAAACAGGTGCATCAAAGCTGCTGGAGCATCTTATCAACCtcactggaaaataaaaatggaaaaccgATCAGGTAAAAAGTCTAACTTGCATAGAATAATTCTACAGATAAGCTGTAGGTATTCTCACCAAAGTTGTTCCTTCACCCATTTCCTCTGCTGTCTGAGGACCTGCAACAAAGGATCGTCTTCAAACTCCTCCCCATCTGAGTCTGTATGTAAGATTGTGATATCAGGATAAGAGGGGaagaataaatcatttatattatttattacacactATCAAATAATTTGGTGttgtttctttacttttttttgcatagaatgatgcattaaacaaataatatattttaaatgcaataaagagATTTTGACAtcgttacatttttattacaaataaatgttcctTTGTacattctattcatcaaaatatcagaCGTTCTGAATTCAGC

Function

symbol description
hspb6 Orthologous to human HSPB6 (heat shock protein family B (small) member 6).

NR:

description
PREDICTED: alpha-crystallin A chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159862 False 1765 TUCP 0.39 3 20189033 20191454
TU159863 False 1094 TUCP 0.44 4 20189033 20253742
TU159872 True 1796 TUCP 0.41 6 20189033 20254271

Neighbor

gene id symbol gene type direction distance location
psenen psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 coding upstream 2172 20184067 ~ 20186861 (+)
igflr1 LOC107585721 coding upstream 39216 20146188 ~ 20149817 (+)
zbtb32 zbtb32,LOC107745206,LOC107585720,LOC107701562,LOC107740056,LOC107683047 coding upstream 47907 20126733 ~ 20141126 (+)
LOC122358429 LOC107704729,LOC107585716,LOC107585718,LOC107739789,LOC107585717,LOC107701556,LOC107683669 coding upstream 82465 20104530 ~ 20106568 (+)
LOC122358430 LOC107683669,LOC107701556,LOC107709782,LOC107585716,LOC107704729,LOC107739789,LOC107585718,LOC107585717,LOC107709781 coding upstream 86929 20100720 ~ 20102104 (+)
LOC122358794 lin37,LOC107745239,LOC107675874,LOC107747665,LOC107585799,LOC107701558 coding downstream 7456 20261727 ~ 20267188 (+)
LOC122359506 NA coding downstream 63275 20317546 ~ 20334995 (+)
LOC122358440 NA coding downstream 83275 20337546 ~ 20346308 (+)
LOC122358498 LOC107735540 coding downstream 99558 20353829 ~ 20356625 (+)
stim1a stim1a,stim1,LOC107745192,LOC107686510,LOC107570037,LOC107675872,LOC108432992,LOC108277929 coding downstream 151439 20405710 ~ 20438826 (+)
G108231 LOC107571392,LOC107701561,LOC107740055 non-coding upstream 46661 20141805 ~ 20142372 (+)
G108211 NA non-coding upstream 133139 19998614 ~ 20055894 (+)
G108217 NA non-coding upstream 172404 20014813 ~ 20016629 (+)
G108207 NA non-coding upstream 274590 19914149 ~ 19914443 (+)
G108155 LOC107755381,LOC107582218,LOC107585797,LOC107694807,LOC107694804,LOC107739770,LOC107704708 non-coding upstream 453138 19731418 ~ 19735895 (+)
G108256 hsc70,LOC107745199,LOC107675864,LOC107585770,LOC108441346,LOC108241987 non-coding downstream 43117 20297388 ~ 20302209 (+)
G108337 NA non-coding downstream 66610 20320881 ~ 20321946 (+)
LOC122359467 NA non-coding downstream 97326 20351597 ~ 20352384 (+)
LOC122359263 NA non-coding downstream 579223 20833494 ~ 20838578 (+)
G108394 NA non-coding downstream 594451 20848722 ~ 20849915 (+)
si:dkey-262k9.2 LOC107694804,LOC107739770,LOC107755381,LOC107704708,LOC107585797,LOC107694807,LOC107582218 other upstream 414648 19721284 ~ 19774385 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other upstream 1193042 18993345 ~ 18995991 (+)
G107777 NA other upstream 1345178 18842276 ~ 18843855 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other upstream 1393051 18794080 ~ 18795982 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other upstream 1428536 18759582 ~ 18760497 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other downstream 957539 21211810 ~ 21214493 (+)
LOC122358705 NA other downstream 1470133 21724404 ~ 21726266 (+)
G108571 NA other downstream 1477710 21731981 ~ 21733107 (+)
G108572 LOC107745176,LOC107698871 other downstream 1480743 21735014 ~ 21735718 (+)
G108573 NA other downstream 1482409 21736680 ~ 21737687 (+)

Expression


Co-expression Network