LOC122358705


Basic Information

Item Value
gene id LOC122358705
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 21724404 ~ 21726266 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU160418
GGGCGATACATGTAGTCACGCCCCAAACACCTTTCGAGGCGAGTGAGGTGCTGAGAGTTCTGCTGAACGAAGACGGAAGCTGAAGATGGTCGCTGATATAAACTGAGATCACGATGATGCCTCGTCGACCGTATGGAGACGCACGTCGCCGATTTCTAGAAAACCAAAACGCCAAGTGCAGTGCACAGTCAAGAGCTGAATGAAATCAAGAGCCATGATCGCGAAAAAGAATTCATCCCAAAACAGAAGAACTACAAAGGCCGACAAGTCTTTTGCTTGCCTTGAGTGTGGAAAGAGCTACGCGCTACAAGGAAGCTTTAAAAAGCACCAGCTAATTCATAACGGTGAGAAGCACGAAtgccctcagtgtggaaagagctttGCACTAAAAAGCCACCTTAACAGACACGTTAAAATACACACCGGGGAGAAACCTCACGCGTGTCGTCACTGCGGAAAGAGTTTTTCTCAAAAGATTCATCTCAGCCGCCATCTGCGACGTCACGAAGAAACGCTCAGCTGTGATCAGTGCGGAAAGAAGTTTAGATCCTCATCATACCTCGACAAACACCTGCTGGTCCACGCGGTTGAGAGGCCGTACTTGTGCTCGGTGTGCGGAAAGAGTTTTTCACGGCTGGCCAACTGCAAGAAGCACCAGAAGATCCATTCTTCTGAGAGGAATCATACCTGCGTCGAATGCGGAAAGACCTTCATTACGCCCGAATACCTGCGAAAGCATCAGAAAACTCACACTACGAAAAGACCGTTCGCCTGCCCGCAGTGCGGTTACGGCTTCAGAGAGAAAATCCACCTCAGCAAACACATGAGggtccacaccggagagaagccgcaCACGTGCCGTCACTGTGGGAAGAGCTTCATACAACCGTCGGGTCTCCGTTATCACATGCATCTTCACTCCGGAGCGAAAC
>XM_043258549.1
ttattcaggTGTGCACCTAAACCTTTTATAGTATGTACTTTTATTGCTTACTGAACGGaacaaattagtttttacattAATCCATGGACTGACCGTCACACACCGCTAGTACATATGGAAGAGGACCGAGCCAATGATAGTGTTGTGGGCGGGGCGATACATGTAGTCACGCCCCAAACACCTTTCGAGGCGAGTGAGGTGCTGAGAGTTCTGCTGAACGAAGACGGAAGCTGAAGATGGTCGCTGATATAAACTGAGATCACGATGATGCCTCGTCGACCGTATGGAGACGCACGTCGCCGATTTCTAGAAAACCAAAACGCCAAGTGCAGTGCACAGTCAAGAGCTGAATGAAATCAAGAGCCATGATCGCGAAAAAGAATTCATCCCAAAACAGAAGAACTACAAAGGCCGACAAGTCTTTTGCTTGCCTTGAGTGTGGAAAGAGCTACGCGCTACAAGGAAGCTTTAAAAAGCACCAGCTAATTCATAACGGTGAGAAGCACGAAtgccctcagtgtggaaagagctttGCACTAAAAAGCCACCTTAACAGACACGTTAAAATACACACCGGGGAGAAACCTCACGCGTGTCGTCACTGCGGAAAGAGTTTTTCTCAAAAGATTCATCTCAGCCGCCATCTGCGACGTCACGAAGAAACGCTCAGCTGTGATCAGTGCGGAAAGAAGTTTAGATCCTCATCATACCTCGACAAACACCTGCTGGTCCACGCGGTTGAGAGGCCGTACTTGTGCTCGGTGTGCGGAAAGAGTTTTTCACGGCTGGCCAACTGCAAGAAGCACCAGAAGATCCATTCTTCTGAGAGGAATCATACCTGCGTCGAATGCGGAAAGACCTTCATTACGCCCGAATACCTGCGAAAGCATCAGAAAACTCACACTACGAAAAGACCGTTCGCCTGCCCGCAGTGCGGTTACGGCTTCAGAGAGAAAATCCACCTCAGCAAACACATGAGggtccacaccggagagaagccgcaCACGTGCCGTCACTGTGGGAAGAGCTTCATACAACCGTCGGGTCTCCGTTATCACATGCATCTTCACTCCGGAGCGAAACCGTACAGCTGCGATCAGTGCGGTAGAAGCTTCACATCGCCGCCGCTTCTGAAAAAGGCACCTGTCGGTGCACACGGACGCGAGGCTCCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160418 False 932 TUCP 0.50 2 21724555 21726174
XM_043258549.1 True 1175 mRNA 0.50 2 21724404 21726266

Neighbor

gene id symbol gene type direction distance location
LOC122358927 NA coding upstream 424 21715201 ~ 21723980 (+)
mtnr1ba mtnr1ba,LOC107745177,LOC107585812,LOC107669925,LOC107705472,LOC108413652 coding upstream 141497 21567245 ~ 21582907 (+)
fat3a fat3,fat3a,LOC107564369,LOC107705473,LOC107585783,LOC107698854,LOC107745210 coding upstream 169864 21420083 ~ 21554540 (+)
gal3st2 LOC107698869,LOC107745180,LOC107585737,LOC107564367 coding upstream 428502 21285387 ~ 21295902 (+)
efhd1 efhd1,LOC107585735,LOC107741634,LOC107698858,LOC107669899,LOC107564379 coding upstream 460960 21255183 ~ 21263444 (+)
LOC122358818 si:ch211-276c2.2,LOC107698872,LOC107585786,LOC107669856,LOC107739921,LOC108278112,LOC108440474 coding downstream 65340 21791606 ~ 21833216 (+)
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding downstream 116397 21842663 ~ 22014307 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding downstream 325324 22051590 ~ 22065594 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding downstream 440848 22167114 ~ 22174542 (+)
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding downstream 457282 22183548 ~ 22205101 (+)
G108553 NA non-coding upstream 107211 21616656 ~ 21617193 (+)
G108427 NA non-coding upstream 521895 21201387 ~ 21202509 (+)
G108418 LOC107086176 non-coding upstream 534031 21072081 ~ 21190373 (+)
G108394 NA non-coding upstream 874489 20848722 ~ 20849915 (+)
LOC122359263 NA non-coding upstream 885826 20833494 ~ 20838578 (+)
G108569 LOC107573028,LOC107705465,LOC107697810,LOC107685875,LOC107564371,LOC107566573,LOC107585758,LOC107669894,LOC107573797 non-coding downstream 794 21727060 ~ 21727570 (+)
G108648 NA non-coding downstream 299532 22025798 ~ 22026309 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding downstream 302171 22028437 ~ 22036838 (+)
G108713 NA non-coding downstream 451126 22177392 ~ 22178630 (+)
G108721 NA non-coding downstream 539566 22265832 ~ 22323620 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 509911 21211810 ~ 21214493 (+)
G108230 hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664 other upstream 1470133 20189033 ~ 20254271 (+)
G108245 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 other upstream 1474432 20184120 ~ 20249972 (+)
LOC122359185 LOC107742015,LOC107699248 other upstream 1508925 20208170 ~ 20215479 (+)
si:dkey-262k9.2 LOC107694804,LOC107739770,LOC107755381,LOC107704708,LOC107585797,LOC107694807,LOC107582218 other upstream 1950019 19721284 ~ 19774385 (+)
G108571 NA other downstream 5715 21731981 ~ 21733107 (+)
G108572 LOC107745176,LOC107698871 other downstream 8748 21735014 ~ 21735718 (+)
G108573 NA other downstream 10414 21736680 ~ 21737687 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 1049383 22775649 ~ 22777725 (+)
G108990 NA other downstream 1222874 22949140 ~ 22953513 (+)

Expression


Co-expression Network