G108648


Basic Information

Item Value
gene id G108648
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22025798 ~ 22026309 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU160575
tcctcagcATCTTCATGATTCATTCCAGATGTTTCTGGATCACTCATGTCATCCTCTTTAATAATGCTGCAGAGATCCTCTTATGGGATGATGGGAATAATGCATCGGTGGACTGTTGTGGGACGGGCGCCAGATCTACGAAATCCAACTATTTACACTGAATTACTTTAATTCAGTCTGCTTCGCAATGTGAACAGACTGGAGGTTGATCGCAATGAATCATTATTATTCAGTGCCGTGGTACTTTACAGTTCGGCTTTGTAAAGAAACGATATTTCTACTAACATCAAAACGTTAAATGGAAACAGAGTTGCACGCTTTCTAGAAAATCATATTAGCCTACTCACATAATGCACTGGATTAGTAATAAACCATGACACATACTGCGTCccattacatattaaatataaatttttgagCTGGATAATGTTTGTAAACCATGTAAATCGGTCCTCTCCCATATTTAACATCAACCCTTGTTTCACTAACGTTAAACACGTCTCTTAGCGGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160575 True 512 lncRNA 0.39 1 22025798 22026309

Neighbor

gene id symbol gene type direction distance location
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding upstream 11491 21842663 ~ 22014307 (+)
LOC122358818 si:ch211-276c2.2,LOC107698872,LOC107585786,LOC107669856,LOC107739921,LOC108278112,LOC108440474 coding upstream 192582 21791606 ~ 21833216 (+)
LOC122358927 NA coding upstream 301818 21715201 ~ 21723980 (+)
mtnr1ba mtnr1ba,LOC107745177,LOC107585812,LOC107669925,LOC107705472,LOC108413652 coding upstream 442891 21567245 ~ 21582907 (+)
fat3a fat3,fat3a,LOC107564369,LOC107705473,LOC107585783,LOC107698854,LOC107745210 coding upstream 471258 21420083 ~ 21554540 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding downstream 25281 22051590 ~ 22065594 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding downstream 140805 22167114 ~ 22174542 (+)
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding downstream 157239 22183548 ~ 22205101 (+)
tiam1b tiam1b,LOC107670130,LOC107705640,LOC107669892,LOC107558809,LOC107585792 coding downstream 193901 22220210 ~ 22274827 (+)
LOC122358842 NA coding downstream 251679 22277988 ~ 22279228 (+)
G108561 NA non-coding upstream 105388 21642583 ~ 21920410 (+)
G108560 LOC107585784,LOC107745209,LOC107698870,LOC107564370,LOC107705471 non-coding upstream 114443 21634201 ~ 21911355 (+)
G108555 NA non-coding upstream 116946 21631329 ~ 21908852 (+)
G108569 LOC107573028,LOC107705465,LOC107697810,LOC107685875,LOC107564371,LOC107566573,LOC107585758,LOC107669894,LOC107573797 non-coding upstream 298228 21727060 ~ 21727570 (+)
G108553 NA non-coding upstream 408605 21616656 ~ 21617193 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding downstream 2128 22028437 ~ 22036838 (+)
G108713 NA non-coding downstream 151083 22177392 ~ 22178630 (+)
G108721 NA non-coding downstream 239523 22265832 ~ 22323620 (+)
G108723 NA non-coding downstream 314423 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding downstream 320142 22346451 ~ 22349630 (+)
G108573 NA other upstream 288111 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 290080 21735014 ~ 21735718 (+)
G108571 NA other upstream 292691 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 299532 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 811305 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 749340 22775649 ~ 22777725 (+)
G108990 NA other downstream 922831 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 929402 22955711 ~ 22959679 (+)
G109132 NA other downstream 1220466 23246775 ~ 23271291 (+)
G109193 NA other downstream 1483123 23509432 ~ 23510315 (+)

Expression


Co-expression Network