G108721


Basic Information

Item Value
gene id G108721
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22265832 ~ 22323620 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU160678
tgtctatatatatatatatatatattgtgacgggaggagccagcgacagacacagtgggcgtggcgtcaggcctcggagaggcttttattgacaaaataataataataatacaaaataaagtgtccatgggaaaagtgtccaaataaaaaggggatctggtgtcctcgtcgtgccgcggggaaagtgaaggttgaggccgtgttccaggggaagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctttttctggcccggggcgcgaggggcggcggcttcttccgcggcgtctccgtcgtttctttgctccggcggcagagtgggatgagctgtgtgctcacagcctggactacgggggtcccacgacgcacttctcggacggcgggtgaggtccatcgcgcacccttcctggacccacgaggacaccagcgtgcatgcacgggaagagaccggtctcccgaggagaggcgcgcagggcatttaacggcggcggtgacaaggctaaatccccttcaggtgtgcctcgtcacacgccgccagacctggccaataccacgcccctcctctcgaacacacccactcccgtcgggagcctggtgaagggcggcgaataaaggacggggtgatggtgacaataaagaggaggggcagccgactcgtcacattcccctccccaagcgtcaaccccgtcaggcggtcgccgcccacgcaggagtgctaccttcctcaaccaggctccagcggtcggagtgggcggggcagggattcctctccgggcaactcccctctcgcaccgggacagagaaaccgggaattagtcggaatgctcaaccagccaccgggtaaatgaccataagcaagcgtcacttacccttcctggtggctgggagcgagtctccgttgttcctccatcccggcatgggtaccagcgagaggggatgacgtcatcagatgtcgcccaactgtgccgtctaagctccgccttgcccgcattctccaccactgtgacgggaggagccagcgacagacacagtgggcgtggcgtcaggcctcggagaggcttttattgacaaaaaataataataatacaaaataaagtgtccatgggaaaagtgtccaaataaaaggggggatctggtgtcctcgtcgtgccgcggggaaagtgaaggttgaggccgtgttccagggggga

Function

GO:

id name namespace
GO:0070013 intracellular organelle lumen cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0043233 organelle lumen cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU160678 True 1205 lncRNA 0.59 2 22265832 22323620

Neighbor

gene id symbol gene type direction distance location
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding upstream 60731 22183548 ~ 22205101 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding upstream 91290 22167114 ~ 22174542 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding upstream 200238 22051590 ~ 22065594 (+)
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding upstream 251525 21842663 ~ 22014307 (+)
LOC122358818 si:ch211-276c2.2,LOC107698872,LOC107585786,LOC107669856,LOC107739921,LOC108278112,LOC108440474 coding upstream 432616 21791606 ~ 21833216 (+)
slc8a2b slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914 coding downstream 36418 22360038 ~ 22443692 (+)
acsl3a acsl3a,acsl3,LOC107585759 coding downstream 123974 22447594 ~ 22471189 (+)
kcne4 LOC107669903,LOC107725203,LOC107733928,LOC107558850,LOC107670090 coding downstream 150384 22474004 ~ 22475711 (+)
scg2a LOC107585745,LOC107670131,LOC107725137 coding downstream 166264 22489884 ~ 22493619 (+)
dhrs12la flj13639,LOC107725108,LOC107670134,LOC107669913,LOC103025652,LOC108433977,LOC108278219 coding downstream 175526 22499146 ~ 22507783 (+)
G108713 NA non-coding upstream 87202 22177392 ~ 22178630 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding upstream 228994 22028437 ~ 22036838 (+)
G108648 NA non-coding upstream 239523 22025798 ~ 22026309 (+)
G108561 NA non-coding upstream 345422 21642583 ~ 21920410 (+)
G108560 LOC107585784,LOC107745209,LOC107698870,LOC107564370,LOC107705471 non-coding upstream 354477 21634201 ~ 21911355 (+)
G108723 NA non-coding downstream 17112 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding downstream 22831 22346451 ~ 22349630 (+)
G108736 NA non-coding downstream 68063 22391683 ~ 22446892 (+)
G108743 NA non-coding downstream 178151 22501771 ~ 22511258 (+)
G108740 NA non-coding downstream 199130 22522750 ~ 22564181 (+)
G108573 NA other upstream 528145 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 530114 21735014 ~ 21735718 (+)
G108571 NA other upstream 532725 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 539566 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 1051339 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 452029 22775649 ~ 22777725 (+)
G108990 NA other downstream 625520 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 632091 22955711 ~ 22959679 (+)
G109132 NA other downstream 923155 23246775 ~ 23271291 (+)
G109193 NA other downstream 1185812 23509432 ~ 23510315 (+)

Expression


Co-expression Network