G108743


Basic Information

Item Value
gene id G108743
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22501771 ~ 22511258 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU160726
CATGAGATACATCTTAAAtctttattgtaatatttctttcGATCTCTGACTGAAACTACAGTCATCATTAAGACTTGCGTCAGTTTTCGTATTAGCGGCAGAAGAGTTTTATAAGAAAAATACAGATGTTTGAACTCAACTTTGTATACACAGAGAGAATAATACTTCATTGCTGAACTACCGAAGTAAAGGAAGCTTTAGAAAAAAGAGCACATAGAAAAACAGAGTCATTTAGAGTTATGTACAGTTTTAGGGCTTGAGCTTTACAATGTTTTCGACGCCTGTGTGAAAGGAAACGGTTTGTGGGATTTTACACGGCGGTTAAACCGAATCGCGATATCGGGGCGAAACGGTGTGACTCCCTGAAGTGTGAAGGAAAAGAATGAACGAAACGAAGAAAGTGAAACTCCCTCGGTGCCCCTGATGAGAAATTACAATCGTGGTCAGTATCTTTCCGATTAAAATGACGTGAAAGTGATGTCACACACGACAATGGCGTCATGaatcggaaaaaaaaaactgtgacatCACTGCATTCAACAGCTCTACATTCACGTCCTTTTGACATTAAACGAGGGAAATCGGCTACAAAAGCTATTAATTAAATCGCTAGCGAGAGGCCATTTAACGCGAACgagcacgcacgcgcacacgcacacgcacaccgCGAGGAACAACTCGAAAAGACGGAGGAGAGCGGCGGATGAAAGGAAAGAGACGACGTTTGTAAACGGGTTAGAATTCTGGCTTCTCATTGGCCGGCGTGACGTCCGCCGCGAGCTGTGCGTCAATTTGAAACAAACGTAACTGTTTAAAGAAACAGTGCACCCAAAACGACATTTCCGTCATCGTTTAGTCAAATCGTTCCGAACCTCTTGAACACACAGCGTTGCCGTTAAGTCATATGCTTCGTGTCAAAAACGAAATGCTGAAATTCCCGCCTTCcaatctcatttgcatttacCGACCTAGGCAGGTTTGGCGCCACATTGAATCAAACAAACAACGCGAGGGATAGCGTTTTTTTCACTCGcagcttcattttaattttttaagtgaAACATGGCACTACCTCGAGTAAGCTCAGGTtttaaaatcagcaaaaatattGCAAACTGGCAGGTTGGATTATGCTATTAAGAAGAAACTATTTGTTGCAATGCAGCGCGGTCCATATCACGCAAGTCTTAAAGACTATCCGTGTCAGTTTTGGTTTGTAGAAGCTATTATACAGAATCAGGATAGTTGTAGTATAGTGCACAAGTTGTATGGACAAATTTTGTGATGCTTTGTTGAAGCCTCAGTCTTCATTCACTTCCAGTGGATGGAAAGACACCTAGTTTTCTGTTCCTAGAAGCATCAGAATAAAGTTTTGGAAAGATACGAGTAAATGTTGTAAATGCTGACAATTATTGGGATAAACATTGTTTTGGTATGAACGTCTGTTTCCAccaaggaataaaaaaaaaaaaaaaaataaaaagtttagaaTTGCAAGGTGTAAGTTGGCAATTACGTGTTTACAACTTGGATCTTATGacagataaataaatcataattatgagaacgaaaatgttacaattacctttttttggACAGAATTGACTGACAATCGTAGGAAAAAACGGCAGAATTGTAAGttaaaaagttgcaattgcttttttacactttttatccCGAGGCAGACACAAACTTCCATACCACAATTTGTCCCTAAACCACAAAGAACCGATAATTAGTGCTATAAATAGTGTTTTACACCTGAACACTACTGTTTTAACAGAATGTTTCATTAGAAATCGCTCCATGGATTTTATGCTACACTTGATGTCCCTCGACGACCTGACCTGAACCTGTCCATCTCTTTGAATTCTATCTTCTCTTCACTTCACCGTTAAGGTTGCAGTGACATTTTTAGAGGGAAAATGAAGTTTGAACGGGAGCGTTCCATCGTTACTATGGAACACTCGTTTCCATGGTAACGTGAGTGCTGGTTGCTACGACCGGTGGTAGCGTTCGAATTCACGAAGGGTAAAATGGATAAACAAGAACGATGGCTGAAGAAGAAACAGGATATGATTAAGGAATGCTTCCTGTGTTTGAGTGGTACTTCTGGATAGAGAGAATACAAAATATcagccatacacacacacacacacacacacacacacacaaagaaagagtGCAAATATTGTGCTTTTAGAAGTACCTTGAGTTCATGTTTGCTCAAATCCAGGTCATCACACCTCTTAAGAGACAAAAAACGTCCGATTCATAAAATCAAGGAGCATCCCTACGACACACATATTCACATACACCGTGCTGAAGTGTCCGTGTTTGGCAGACTCCACAGCTGAAGGACGAGAGAGTTAGACGGGTCGGTGATCCATGATCTCTGTTGGCGGAGTGTGGGCGGTGCCTTCGGAAACAGCCAATCAGCGCGGAGAGAATCCCGCTGCTACACTGCTGCCCACCAACTGCGTCATGTCCCAG
>TU160727
AAGAAAAAACAGCACATAGAAAAACAGAGTCATTTAGAGTTATGTACAGTTTTAGGGCTTGAGCTTTACAATGTTTTCGACGCCTGTGTGAAAGGAAACGGTTTGTGGGATTTTACACGGCGGTTAAACCGAATCGCGATATCGGGGCGAAACGGTGTGACTCCCTGAAGTGTGAAGGAAAAGAATGAACGAAACGAAGAAAGTGAAACTCCCTCGGTGCCCCTGATGAGAAATTACAATCGTGGTCAGTATCTTTCCGATTAAAATGACGTGAAAGTGATGTCACACACGACAATGGCGTCATGaatcggaaaaaaaaaactgtgacatCACTGCATTCAACAGCTCTACATTCACGTCCTTTTGACATTAAACGAGGGAAATCGGCTACAAAAGCTATTAATTAAATCGCTAGCGAGAGGCCATTTAACGCGAACgagcacgcacgcgcacacgcacacgcacaccgCGAGGAACAACTCGAAAAGACGGAGGAGAGCGGCGGATGAAAGGAAAGAGACGACGTTTGTAAACGGGTTAGAATTCTGGCTTCTCATTGGCCGGCGTGACGTCCGCCGCGAGCTGTGCGTCAATTTGAAACAAACGTAACTGTTTAAAGAAACAGTGCACCCAAAACGACATTTCCGTCATCGTTTAGTCAAATCGTTCCGAACCTCTTGAACACACAGCGTTGCCGTTAAGTCATATGCTTCGTGTCAAAAACGAAATGCTGAAATTCCCGCCTTCcaatctcatttgcatttacCGACCTAGGCAGGTTTGGCGCCACATTGAATCAAACAAACAACGCGAGGGATAGCGTTTTTTTCACTCGcagcttcattttaattttttaagtgaAACATGGCACTACCTCGAGTAAGCTCAGGTtttaaaatcagcaaaaatattGCAAACTGGCAGGTTGGATTATGCTATTAAGAAGAAACTATTTGTTGCAATGCAGCGCGGTCCATATCACGCAAGTCTTAAAGACTATCCGTGTCAGTTTTGGTTTGTAGAAGCTATTATACAGAATCAGGATAGTTGTAGTATAGTGCACAAGTTGTATGGACAAATTTTGTGATGCTTTGTTGAAGCCTCAGTCTTCATTCACTTCCAGTGGATGGAAAGACACCTAGTTTTCTGTTCCTAGAAGCATCAGAATAAAGTTTTGGAAAGATACGAGTAAATGTTGTAAATGCTGACAATTATTGGGATAAACATTGTTTTGGTATGAACGTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160726 True 2493 lncRNA 0.41 2 22508587 22511258
TU160727 False 1248 lncRNA 0.42 2 22501771 22510032

Neighbor

gene id symbol gene type direction distance location
scg2a LOC107585745,LOC107670131,LOC107725137 coding upstream 8152 22489884 ~ 22493619 (+)
kcne4 LOC107669903,LOC107725203,LOC107733928,LOC107558850,LOC107670090 coding upstream 26060 22474004 ~ 22475711 (+)
acsl3a acsl3a,acsl3,LOC107585759 coding upstream 30582 22447594 ~ 22471189 (+)
slc8a2b slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914 coding upstream 58079 22360038 ~ 22443692 (+)
grik1b grik1b,LOC107670116,LOC107669874 coding upstream 176064 22295316 ~ 22325707 (+)
zgc:85932 NA coding downstream 36095 22547353 ~ 22569791 (+)
actn4 actn4,LOC107669904,LOC107570110,LOC106612603 coding downstream 61233 22572491 ~ 22616753 (+)
tyr tyr,LOC107670098,LOC107669900 coding downstream 203248 22714506 ~ 22731196 (+)
naalad2 naalad2,LOC107560856,LOC107737433,LOC107670141,LOC107669901,LOC107731810 coding downstream 240276 22751534 ~ 22764962 (+)
lrrc51 LOC107706076,LOC107558849,LOC107670099,LOC107669906 coding downstream 297522 22808780 ~ 22813270 (+)
G108736 NA non-coding upstream 54879 22391683 ~ 22446892 (+)
G108723 NA non-coding upstream 145858 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding upstream 152141 22346451 ~ 22349630 (+)
G108721 NA non-coding upstream 178151 22265832 ~ 22323620 (+)
G108713 NA non-coding upstream 323141 22177392 ~ 22178630 (+)
G108740 NA non-coding downstream 11492 22522750 ~ 22564181 (+)
G108762 NA non-coding downstream 21614 22532872 ~ 22533227 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding downstream 76677 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding downstream 108418 22619676 ~ 22629112 (+)
G108906 LOC107731813,LOC107737424,LOC107558819,LOC107670133,LOC107669866,LOC107570104 non-coding downstream 149727 22660985 ~ 22666293 (+)
G108573 NA other upstream 764084 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 766053 21735014 ~ 21735718 (+)
G108571 NA other upstream 768664 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 775505 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 1287278 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 264391 22775649 ~ 22777725 (+)
G108990 NA other downstream 437882 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 444453 22955711 ~ 22959679 (+)
G109132 NA other downstream 735517 23246775 ~ 23271291 (+)
G109193 NA other downstream 998174 23509432 ~ 23510315 (+)

Expression


Co-expression Network